RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 PCNTO95613 3336 aa16.67■□□□□ 0.26
DDX39B-209ENST00000428450 KTN1Q86UP2 1357 aaKnown RBP16.66■□□□□ 0.26
DDX39B-209ENST00000428450 COL13A1Q5TAT6 717 aaPredicted RBP16.65■□□□□ 0.26
DDX39B-209ENST00000428450 NME9Q86XW9 330 aa16.63■□□□□ 0.25
DDX39B-209ENST00000428450 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
DDX39B-209ENST00000428450 TOMM70O94826 608 aa16.62■□□□□ 0.25
DDX39B-209ENST00000428450 WWC3Q9ULE0 1092 aa16.62■□□□□ 0.25
DDX39B-209ENST00000428450 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
DDX39B-209ENST00000428450 USP54Q70EL1 1684 aa16.62■□□□□ 0.25
DDX39B-209ENST00000428450 LTN1O94822 1766 aa16.61■□□□□ 0.25
DDX39B-209ENST00000428450 DOT1LQ8TEK3 1739 aa16.61■□□□□ 0.25
DDX39B-209ENST00000428450 FLAD1Q8NFF5 587 aa16.59■□□□□ 0.25
DDX39B-209ENST00000428450 IP6K1Q92551 441 aa16.59■□□□□ 0.25
DDX39B-209ENST00000428450 USP47Q96K76 1375 aa16.59■□□□□ 0.25
DDX39B-209ENST00000428450 SBNO2Q9Y2G9 1366 aa16.59■□□□□ 0.25
DDX39B-209ENST00000428450 MON2Q7Z3U7 1717 aa16.59■□□□□ 0.25
DDX39B-209ENST00000428450 CAPN15O75808 1086 aa16.58■□□□□ 0.24
DDX39B-209ENST00000428450 AMIGO3Q86WK7 504 aa16.58■□□□□ 0.24
DDX39B-209ENST00000428450 JMYQ8N9B5 988 aa16.58■□□□□ 0.24
DDX39B-209ENST00000428450 ZCRB1Q8TBF4 217 aaKnown RBP16.58■□□□□ 0.24
DDX39B-209ENST00000428450 CD163L1Q9NR16 1453 aa16.57■□□□□ 0.24
DDX39B-209ENST00000428450 LTV1Q96GA3 475 aaPredicted RBP16.57■□□□□ 0.24
DDX39B-209ENST00000428450 PRELPP51888 382 aa16.56■□□□□ 0.24
DDX39B-209ENST00000428450 KLRG1Q96E93 195 aa16.56■□□□□ 0.24
DDX39B-209ENST00000428450 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
DDX39B-209ENST00000428450 HTRA3P83110 453 aa16.55■□□□□ 0.24
DDX39B-209ENST00000428450 C5P01031 1676 aa16.55■□□□□ 0.24
DDX39B-209ENST00000428450 NMRK2Q9NPI5 230 aa16.54■□□□□ 0.24
DDX39B-209ENST00000428450 MEGF6O75095 1541 aa16.54■□□□□ 0.24
DDX39B-209ENST00000428450 FAM208AQ9UK61 1670 aaKnown RBP16.53■□□□□ 0.24
DDX39B-209ENST00000428450 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
DDX39B-209ENST00000428450 TNS4Q8IZW8 715 aa16.53■□□□□ 0.24
DDX39B-209ENST00000428450 WDR90Q96KV7 1748 aa16.53■□□□□ 0.24
DDX39B-209ENST00000428450 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.23
DDX39B-209ENST00000428450 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
DDX39B-209ENST00000428450 RBM46Q8TBY0 533 aaKnown RBP16.51■□□□□ 0.23
DDX39B-209ENST00000428450 PALLDQ8WX93 1383 aa16.51■□□□□ 0.23
DDX39B-209ENST00000428450 TOGARAM1Q9Y4F4 1720 aa16.5■□□□□ 0.23
DDX39B-209ENST00000428450 HOXC9P31274 260 aa16.5■□□□□ 0.23
DDX39B-209ENST00000428450 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.49■□□□□ 0.23
DDX39B-209ENST00000428450 EDC4Q6P2E9 1401 aaKnown RBP16.49■□□□□ 0.23
DDX39B-209ENST00000428450 AK7Q96M32 723 aa16.49■□□□□ 0.23
DDX39B-209ENST00000428450 SLC12A5Q9H2X9 1139 aa16.49■□□□□ 0.23
DDX39B-209ENST00000428450 MAP3K19Q56UN5 1328 aa16.48■□□□□ 0.23
DDX39B-209ENST00000428450 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
DDX39B-209ENST00000428450 PHF14O94880 888 aa16.48■□□□□ 0.23
DDX39B-209ENST00000428450 L3MBTL2Q969R5 705 aa16.48■□□□□ 0.23
DDX39B-209ENST00000428450 RGPD2P0DJD1 1756 aa16.47■□□□□ 0.23
DDX39B-209ENST00000428450 FBLN1P23142 703 aa16.47■□□□□ 0.23
DDX39B-209ENST00000428450 NBPF6Q5VWK0 638 aa16.47■□□□□ 0.23
DDX39B-209ENST00000428450 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
DDX39B-209ENST00000428450 NBPF4Q96M43 638 aa16.47■□□□□ 0.23
DDX39B-209ENST00000428450 UBR3Q6ZT12 1888 aa16.47■□□□□ 0.23
DDX39B-209ENST00000428450 PXDNLA1KZ92 1463 aa16.47■□□□□ 0.23
DDX39B-209ENST00000428450 CGNL1Q0VF96 1302 aa16.46■□□□□ 0.23
DDX39B-209ENST00000428450 SSFA2P28290 1259 aa16.46■□□□□ 0.23
DDX39B-209ENST00000428450 FSTL1Q12841 308 aa16.46■□□□□ 0.23
DDX39B-209ENST00000428450 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
DDX39B-209ENST00000428450 TMC1Q8TDI8 760 aa16.46■□□□□ 0.23
DDX39B-209ENST00000428450 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
DDX39B-209ENST00000428450 ROCK2O75116 1388 aaKnown RBP16.45■□□□□ 0.22
DDX39B-209ENST00000428450 KIAA1551Q9HCM1 1747 aa16.45■□□□□ 0.22
DDX39B-209ENST00000428450 A0A1W2PP64 1363 aa16.44■□□□□ 0.22
DDX39B-209ENST00000428450 AMPHP49418 695 aa16.44■□□□□ 0.22
DDX39B-209ENST00000428450 TGFB2P61812 414 aa16.44■□□□□ 0.22
DDX39B-209ENST00000428450 ARHGAP27Q6ZUM4 889 aa16.44■□□□□ 0.22
DDX39B-209ENST00000428450 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
DDX39B-209ENST00000428450 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
DDX39B-209ENST00000428450 A0A0G2JLW4 131 aa16.43■□□□□ 0.22
DDX39B-209ENST00000428450 SMARCC1Q92922 1105 aaPredicted RBP16.43■□□□□ 0.22
DDX39B-209ENST00000428450 KIF13BQ9NQT8 1826 aa16.42■□□□□ 0.22
DDX39B-209ENST00000428450 MMP10P09238 476 aa16.42■□□□□ 0.22
DDX39B-209ENST00000428450 C16orf71Q8IYS4 520 aaPredicted RBP16.42■□□□□ 0.22
DDX39B-209ENST00000428450 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
DDX39B-209ENST00000428450 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
DDX39B-209ENST00000428450 CYP27B1O15528 508 aa16.41■□□□□ 0.22
DDX39B-209ENST00000428450 C9orf131Q5VYM1 1079 aa16.41■□□□□ 0.22
DDX39B-209ENST00000428450 PIGBQ92521 554 aa16.41■□□□□ 0.22
DDX39B-209ENST00000428450 TERF2IPQ9NYB0 399 aa16.41■□□□□ 0.22
DDX39B-209ENST00000428450 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
DDX39B-209ENST00000428450 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
DDX39B-209ENST00000428450 N4BP2Q86UW6 1770 aaPredicted RBP16.41■□□□□ 0.22
DDX39B-209ENST00000428450 TATP17735 454 aaPredicted RBP16.4■□□□□ 0.22
DDX39B-209ENST00000428450 COG3Q96JB2 828 aa16.4■□□□□ 0.22
DDX39B-209ENST00000428450 LOC102724428A0A0B4J2F2 783 aa16.39■□□□□ 0.21
DDX39B-209ENST00000428450 DPEP1P16444 411 aa16.39■□□□□ 0.21
DDX39B-209ENST00000428450 SIK1P57059 783 aa16.39■□□□□ 0.21
DDX39B-209ENST00000428450 MAP2P11137 1827 aaKnown RBP16.39■□□□□ 0.21
DDX39B-209ENST00000428450 C10orf71Q711Q0 1435 aa16.38■□□□□ 0.21
DDX39B-209ENST00000428450 FCHSD2O94868 740 aa16.38■□□□□ 0.21
DDX39B-209ENST00000428450 KCPQ6ZWJ8 1503 aa16.38■□□□□ 0.21
DDX39B-209ENST00000428450 ITGB4P16144 1822 aa16.38■□□□□ 0.21
DDX39B-209ENST00000428450 RTL1A6NKG5 1358 aa16.38■□□□□ 0.21
DDX39B-209ENST00000428450 PLEKHG2Q9H7P9 1386 aa16.38■□□□□ 0.21
DDX39B-209ENST00000428450 GNPATO15228 680 aa16.37■□□□□ 0.21
DDX39B-209ENST00000428450 HSPA1AP0DMV8 641 aaKnown RBP16.37■□□□□ 0.21
DDX39B-209ENST00000428450 HSPA1BP0DMV9 641 aaKnown RBP16.37■□□□□ 0.21
DDX39B-209ENST00000428450 KCNA3P22001 575 aa16.37■□□□□ 0.21
DDX39B-209ENST00000428450 ITPK1Q13572 414 aa16.37■□□□□ 0.21
DDX39B-209ENST00000428450 RRAGCQ9HB90 399 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms