RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 SLC4A2P04920 1241 aa13.04□□□□□ -0.32
ATP2C1-204ENST00000428331 VWDEQ8N2E2 1590 aa13.04□□□□□ -0.32
ATP2C1-204ENST00000428331 WDR33Q9C0J8 1336 aaKnown RBP13.04□□□□□ -0.32
ATP2C1-204ENST00000428331 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
ATP2C1-204ENST00000428331 MYO3AQ8NEV4 1616 aa13.04□□□□□ -0.32
ATP2C1-204ENST00000428331 CEP85Q6P2H3 762 aa13.04□□□□□ -0.32
ATP2C1-204ENST00000428331 PTPRCP08575 1304 aa13.04□□□□□ -0.32
ATP2C1-204ENST00000428331 PKP1Q13835 747 aa13.04□□□□□ -0.32
ATP2C1-204ENST00000428331 CCT4P50991 539 aaKnown RBP13.03□□□□□ -0.32
ATP2C1-204ENST00000428331 FAM83GA6ND36 823 aa13.03□□□□□ -0.32
ATP2C1-204ENST00000428331 LETM1O95202 739 aaPredicted RBP13.03□□□□□ -0.32
ATP2C1-204ENST00000428331 GNAI2P04899 355 aa13.03□□□□□ -0.32
ATP2C1-204ENST00000428331 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
ATP2C1-204ENST00000428331 OTUD7AQ8TE49 926 aaPredicted RBP13.03□□□□□ -0.32
ATP2C1-204ENST00000428331 USP32Q8NFA0 1604 aa13.02□□□□□ -0.32
ATP2C1-204ENST00000428331 SULT6B1Q6IMI4 303 aa13.02□□□□□ -0.32
ATP2C1-204ENST00000428331 PIK3R4Q99570 1358 aa13.02□□□□□ -0.32
ATP2C1-204ENST00000428331 GOLGA6L6A8MZA4 724 aa13.02□□□□□ -0.33
ATP2C1-204ENST00000428331 GNAI3P08754 354 aa13.02□□□□□ -0.33
ATP2C1-204ENST00000428331 LRRCC1Q9C099 1032 aa13.02□□□□□ -0.33
ATP2C1-204ENST00000428331 TMEM63CQ9P1W3 806 aa13.02□□□□□ -0.33
ATP2C1-204ENST00000428331 RRS1Q15050 365 aaKnown RBP13.02□□□□□ -0.33
ATP2C1-204ENST00000428331 CHD1O14646 1710 aa13.02□□□□□ -0.33
ATP2C1-204ENST00000428331 PDLIM2Q96JY6 352 aa13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 MEIS3Q99687 375 aa13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 PDE1AP54750 535 aa13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 NME9Q86XW9 330 aa13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 GPT2Q8TD30 523 aa13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 PNPLA6Q8IY17 1366 aa13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 CFAP74Q9C0B2 1584 aa13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 CYP2E1P05181 493 aaPredicted RBP13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 ZNF853P0CG23 659 aa13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 MED14O60244 1454 aa13.01□□□□□ -0.33
ATP2C1-204ENST00000428331 TULP4Q9NRJ4 1543 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 ADGRB1O14514 1584 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 INO80Q9ULG1 1556 aaPredicted RBP13□□□□□ -0.33
ATP2C1-204ENST00000428331 LMTK2Q8IWU2 1503 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 SOX12O15370 315 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 IL13P35225 146 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 ANAPC15P60006 121 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 SRCIN1Q9C0H9 1055 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 ASXL2Q76L83 1435 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 UVSSAQ2YD98 709 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 INTS4Q96HW7 963 aaKnown RBP13□□□□□ -0.33
ATP2C1-204ENST00000428331 EXOC6BQ9Y2D4 811 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 FAM135BQ49AJ0 1406 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 RAPGEF3O95398 923 aa13□□□□□ -0.33
ATP2C1-204ENST00000428331 FKBP5Q13451 457 aaPredicted RBP12.99□□□□□ -0.33
ATP2C1-204ENST00000428331 WAPLQ7Z5K2 1190 aa12.99□□□□□ -0.33
ATP2C1-204ENST00000428331 YTHDC2Q9H6S0 1430 aaKnown RBP12.99□□□□□ -0.33
ATP2C1-204ENST00000428331 GLI2P10070 1586 aa12.99□□□□□ -0.33
ATP2C1-204ENST00000428331 GOLGA6L4A6NEF3 574 aa12.99□□□□□ -0.33
ATP2C1-204ENST00000428331 MX1P20591 662 aa12.99□□□□□ -0.33
ATP2C1-204ENST00000428331 UPF3BQ9BZI7 483 aaKnown RBP12.99□□□□□ -0.33
ATP2C1-204ENST00000428331 SMC3Q9UQE7 1217 aa12.99□□□□□ -0.33
ATP2C1-204ENST00000428331 ESYT1Q9BSJ8 1104 aa12.99□□□□□ -0.33
ATP2C1-204ENST00000428331 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.99□□□□□ -0.33
ATP2C1-204ENST00000428331 HDGFP51858 240 aaKnown RBP12.98□□□□□ -0.33
ATP2C1-204ENST00000428331 REREQ9P2R6 1566 aa12.98□□□□□ -0.33
ATP2C1-204ENST00000428331 OS9Q13438 667 aaPredicted RBP12.98□□□□□ -0.33
ATP2C1-204ENST00000428331 MPNDQ8N594 471 aa12.98□□□□□ -0.33
ATP2C1-204ENST00000428331 DIAPH3Q9NSV4 1193 aa12.98□□□□□ -0.33
ATP2C1-204ENST00000428331 PPRC1Q5VV67 1664 aaKnown RBP12.98□□□□□ -0.33
ATP2C1-204ENST00000428331 RIMS2Q9UQ26 1411 aa12.98□□□□□ -0.33
ATP2C1-204ENST00000428331 MCM10Q7L590 875 aa12.98□□□□□ -0.33
ATP2C1-204ENST00000428331 PRIMPOLQ96LW4 560 aa12.98□□□□□ -0.33
ATP2C1-204ENST00000428331 BRD1O95696 1058 aa12.97□□□□□ -0.33
ATP2C1-204ENST00000428331 TPM3P06753 285 aa12.97□□□□□ -0.33
ATP2C1-204ENST00000428331 CCDC183Q5T5S1 534 aa12.97□□□□□ -0.33
ATP2C1-204ENST00000428331 KCNJ4P48050 445 aa12.97□□□□□ -0.33
ATP2C1-204ENST00000428331 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
ATP2C1-204ENST00000428331 GDPD2Q9HCC8 539 aa12.97□□□□□ -0.33
ATP2C1-204ENST00000428331 USP25Q9UHP3 1055 aa12.97□□□□□ -0.33
ATP2C1-204ENST00000428331 DRC7Q8IY82 874 aa12.96□□□□□ -0.33
ATP2C1-204ENST00000428331 F6X3S4 739 aa12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 RTL1A6NKG5 1358 aa12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 WASLO00401 505 aaPredicted RBP12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 MSH6P52701 1360 aa12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 MROH2AA6NES4 1674 aa12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 FIBPO43427 364 aa12.95□□□□□ -0.34
ATP2C1-204ENST00000428331 CCDC30Q5VVM6 783 aa12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 USP48Q86UV5 1035 aa12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 ZDHHC9Q9Y397 364 aa12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 CHL1O00533 1208 aa12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 ADCY5O95622 1261 aa12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 UBTFL1P0CB47 393 aaPredicted RBP12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 NOLC1Q14978 699 aaKnown RBP eCLIP12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 TSHZ3Q63HK5 1081 aa12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 RUFY2Q8WXA3 655 aa12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 LRRC7Q96NW7 1537 aa12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 CHAMP1Q96JM3 812 aa12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 OSBPL3Q9H4L5 887 aa12.94□□□□□ -0.34
ATP2C1-204ENST00000428331 ZRANB1Q9UGI0 708 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms