RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 SHANK3Q9BYB0 1731 aa24.27■■□□□ 1.48
DDR1-235ENST00000428153 RGPD2P0DJD1 1756 aa24.27■■□□□ 1.48
DDR1-235ENST00000428153 UTRNP46939 3433 aa24.27■■□□□ 1.48
DDR1-235ENST00000428153 RRS1Q15050 365 aaKnown RBP24.27■■□□□ 1.48
DDR1-235ENST00000428153 QSER1Q2KHR3 1735 aa24.27■■□□□ 1.48
DDR1-235ENST00000428153 KIF20BQ96Q89 1820 aa24.26■■□□□ 1.47
DDR1-235ENST00000428153 NBPF6Q5VWK0 638 aa24.26■■□□□ 1.47
DDR1-235ENST00000428153 SLC16A10Q8TF71 515 aa24.26■■□□□ 1.47
DDR1-235ENST00000428153 NBPF4Q96M43 638 aa24.26■■□□□ 1.47
DDR1-235ENST00000428153 FLT4P35916 1363 aa24.26■■□□□ 1.47
DDR1-235ENST00000428153 AKT1S1Q96B36 256 aa24.25■■□□□ 1.47
DDR1-235ENST00000428153 DOT1LQ8TEK3 1739 aa24.24■■□□□ 1.47
DDR1-235ENST00000428153 PRIM1P49642 420 aaKnown RBP24.24■■□□□ 1.47
DDR1-235ENST00000428153 ZNF827Q17R98 1081 aa24.24■■□□□ 1.47
DDR1-235ENST00000428153 MAP3K5Q99683 1374 aa24.24■■□□□ 1.47
DDR1-235ENST00000428153 RAPGEF4Q8WZA2 1011 aa24.23■■□□□ 1.47
DDR1-235ENST00000428153 SYT17Q9BSW7 474 aa24.23■■□□□ 1.47
DDR1-235ENST00000428153 NSD2O96028 1365 aa24.23■■□□□ 1.47
DDR1-235ENST00000428153 LY75O60449 1722 aa24.23■■□□□ 1.47
DDR1-235ENST00000428153 SYTL4Q96C24 671 aaPredicted RBP24.22■■□□□ 1.47
DDR1-235ENST00000428153 HMGB2P26583 209 aaKnown RBP24.21■■□□□ 1.47
DDR1-235ENST00000428153 FHDC1Q9C0D6 1143 aaPredicted RBP24.21■■□□□ 1.47
DDR1-235ENST00000428153 TATP17735 454 aaPredicted RBP24.2■■□□□ 1.46
DDR1-235ENST00000428153 HSP90AB2PQ58FF8 381 aa24.2■■□□□ 1.46
DDR1-235ENST00000428153 ARXQ96QS3 562 aa24.2■■□□□ 1.46
DDR1-235ENST00000428153 NSD3Q9BZ95 1437 aa24.19■■□□□ 1.46
DDR1-235ENST00000428153 CARD14Q9BXL6 1004 aa24.19■■□□□ 1.46
DDR1-235ENST00000428153 PCDH11XQ9BZA7 1347 aa24.18■■□□□ 1.46
DDR1-235ENST00000428153 PCDH11YQ9BZA8 1340 aa24.18■■□□□ 1.46
DDR1-235ENST00000428153 COL24A1Q17RW2 1714 aa24.18■■□□□ 1.46
DDR1-235ENST00000428153 NCAPD2Q15021 1401 aa24.16■■□□□ 1.46
DDR1-235ENST00000428153 ANKRD26Q9UPS8 1709 aa24.15■■□□□ 1.46
DDR1-235ENST00000428153 PNPLA7Q6ZV29 1317 aa24.15■■□□□ 1.46
DDR1-235ENST00000428153 USHBP1Q8N6Y0 703 aa24.15■■□□□ 1.46
DDR1-235ENST00000428153 TFCP2L1Q9NZI6 479 aa24.14■■□□□ 1.45
DDR1-235ENST00000428153 CCNL1Q9UK58 526 aaPredicted RBP24.14■■□□□ 1.45
DDR1-235ENST00000428153 POLD1P28340 1107 aa24.12■■□□□ 1.45
DDR1-235ENST00000428153 TUBGCP6Q96RT7 1819 aa24.12■■□□□ 1.45
DDR1-235ENST00000428153 WASHC2AQ641Q2 1341 aa24.11■■□□□ 1.45
DDR1-235ENST00000428153 PKD1L3Q7Z443 1732 aa24.11■■□□□ 1.45
DDR1-235ENST00000428153 EMILIN1Q9Y6C2 1016 aa24.11■■□□□ 1.45
DDR1-235ENST00000428153 PLEKHG2Q9H7P9 1386 aa24.09■■□□□ 1.45
DDR1-235ENST00000428153 CYP27B1O15528 508 aa24.08■■□□□ 1.45
DDR1-235ENST00000428153 KCNQ4P56696 695 aa24.08■■□□□ 1.45
DDR1-235ENST00000428153 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.08■■□□□ 1.45
DDR1-235ENST00000428153 GOLGB1Q14789 3259 aaKnown RBP24.08■■□□□ 1.44
DDR1-235ENST00000428153 NKX1-1Q15270 411 aaPredicted RBP24.07■■□□□ 1.44
DDR1-235ENST00000428153 MAP2P11137 1827 aaKnown RBP24.07■■□□□ 1.44
DDR1-235ENST00000428153 CHD4Q14839 1912 aa24.06■■□□□ 1.44
DDR1-235ENST00000428153 SMARCC1Q92922 1105 aaPredicted RBP24.06■■□□□ 1.44
DDR1-235ENST00000428153 PALLDQ8WX93 1383 aa24.05■■□□□ 1.44
DDR1-235ENST00000428153 FLAD1Q8NFF5 587 aa24.05■■□□□ 1.44
DDR1-235ENST00000428153 SPG7Q9UQ90 795 aa24.05■■□□□ 1.44
DDR1-235ENST00000428153 C5P01031 1676 aa24.05■■□□□ 1.44
DDR1-235ENST00000428153 POLKQ9UBT6 870 aa24.04■■□□□ 1.44
DDR1-235ENST00000428153 PPM1GO15355 546 aaPredicted RBP24.03■■□□□ 1.44
DDR1-235ENST00000428153 PCGF6Q9BYE7 350 aa24.03■■□□□ 1.44
DDR1-235ENST00000428153 TOGARAM1Q9Y4F4 1720 aa24.02■■□□□ 1.44
DDR1-235ENST00000428153 EIF4G2P78344 907 aaKnown RBP eCLIP24.02■■□□□ 1.448e-8■■■■■ 39.6
DDR1-235ENST00000428153 MPRIPQ6WCQ1 1025 aa24.02■■□□□ 1.44
DDR1-235ENST00000428153 COL23A1Q86Y22 540 aaPredicted RBP24.02■■□□□ 1.44
DDR1-235ENST00000428153 EYA1Q99502 592 aa24.02■■□□□ 1.44
DDR1-235ENST00000428153 ITGB4P16144 1822 aa24.02■■□□□ 1.44
DDR1-235ENST00000428153 TAF1LQ8IZX4 1826 aa24.02■■□□□ 1.44
DDR1-235ENST00000428153 ZNF784Q8NCA9 323 aaPredicted RBP23.99■■□□□ 1.43
DDR1-235ENST00000428153 GPR162Q16538 588 aa23.97■■□□□ 1.43
DDR1-235ENST00000428153 IFNL2Q8IZJ0 200 aa23.97■■□□□ 1.43
DDR1-235ENST00000428153 PIGBQ92521 554 aa23.97■■□□□ 1.43
DDR1-235ENST00000428153 C4BP0C0L5 1744 aa23.96■■□□□ 1.43
DDR1-235ENST00000428153 MSH5O43196 834 aa23.96■■□□□ 1.43
DDR1-235ENST00000428153 EIF4A2Q14240 407 aaKnown RBP23.95■■□□□ 1.42
DDR1-235ENST00000428153 HSPA5P11021 654 aaKnown RBP23.94■■□□□ 1.42
DDR1-235ENST00000428153 PHKG2P15735 406 aa23.94■■□□□ 1.42
DDR1-235ENST00000428153 KLHL34Q8N239 644 aa23.94■■□□□ 1.42
DDR1-235ENST00000428153 POLR3GLQ9BT43 218 aa23.94■■□□□ 1.42
DDR1-235ENST00000428153 IGSF1Q8N6C5 1336 aa23.93■■□□□ 1.42
DDR1-235ENST00000428153 AK7Q96M32 723 aa23.93■■□□□ 1.42
DDR1-235ENST00000428153 TMOD3Q9NYL9 352 aa23.93■■□□□ 1.42
DDR1-235ENST00000428153 LOC102724428A0A0B4J2F2 783 aa23.92■■□□□ 1.42
DDR1-235ENST00000428153 SIK1P57059 783 aa23.92■■□□□ 1.42
DDR1-235ENST00000428153 PANK3Q9H999 370 aa23.92■■□□□ 1.42
DDR1-235ENST00000428153 NLGN2Q8NFZ4 835 aa23.91■■□□□ 1.42
DDR1-235ENST00000428153 CD2APQ9Y5K6 639 aa23.91■■□□□ 1.42
DDR1-235ENST00000428153 UBR3Q6ZT12 1888 aa23.9■■□□□ 1.42
DDR1-235ENST00000428153 GRIN3BO60391 1043 aa23.9■■□□□ 1.42
DDR1-235ENST00000428153 SSFA2P28290 1259 aa23.9■■□□□ 1.42
DDR1-235ENST00000428153 HSP90AB1P08238 724 aaKnown RBP23.89■■□□□ 1.41
DDR1-235ENST00000428153 TNNT2P45379 298 aaPredicted RBP23.88■■□□□ 1.41
DDR1-235ENST00000428153 MSL1Q68DK7 614 aa23.87■■□□□ 1.41
DDR1-235ENST00000428153 ERVV-2B6SEH9 535 aa23.86■■□□□ 1.41
DDR1-235ENST00000428153 AMOTQ4VCS5 1084 aa23.86■■□□□ 1.41
DDR1-235ENST00000428153 CCER1Q8TC90 406 aaPredicted RBP23.86■■□□□ 1.41
DDR1-235ENST00000428153 ZNF831Q5JPB2 1677 aa23.86■■□□□ 1.41
DDR1-235ENST00000428153 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.85■■□□□ 1.41
DDR1-235ENST00000428153 DCAF5Q96JK2 942 aa23.85■■□□□ 1.41
DDR1-235ENST00000428153 ASAP1Q9ULH1 1129 aa23.85■■□□□ 1.41
DDR1-235ENST00000428153 PLEKHO1Q53GL0 409 aaPredicted RBP23.84■■□□□ 1.41
DDR1-235ENST00000428153 PELP1Q8IZL8 1130 aaKnown RBP23.84■■□□□ 1.41
DDR1-235ENST00000428153 LINC00116Q8NCU8 138 aa23.84■■□□□ 1.41
DDR1-235ENST00000428153 ATG3Q9NT62 314 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms