RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 PPP1R1BQ9UD71 204 aaPredicted RBP29.23■■■□□ 2.27
PCGF3-204ENST00000427463 MAP2P11137 1827 aaKnown RBP29.22■■■□□ 2.27
PCGF3-204ENST00000427463 LY75O60449 1722 aa29.21■■■□□ 2.27
PCGF3-204ENST00000427463 HSP90AB2PQ58FF8 381 aa29.21■■■□□ 2.27
PCGF3-204ENST00000427463 ZCRB1Q8TBF4 217 aaKnown RBP29.21■■■□□ 2.27
PCGF3-204ENST00000427463 USHBP1Q8N6Y0 703 aa29.2■■■□□ 2.26
PCGF3-204ENST00000427463 ZBTB7AO95365 584 aa29.19■■■□□ 2.26
PCGF3-204ENST00000427463 QSER1Q2KHR3 1735 aa29.18■■■□□ 2.26
PCGF3-204ENST00000427463 CGNL1Q0VF96 1302 aa29.18■■■□□ 2.26
PCGF3-204ENST00000427463 NSD2O96028 1365 aa29.17■■■□□ 2.26
PCGF3-204ENST00000427463 LRRC4BQ9NT99 713 aa29.17■■■□□ 2.26
PCGF3-204ENST00000427463 TUBGCP6Q96RT7 1819 aa29.16■■■□□ 2.26
PCGF3-204ENST00000427463 EMILIN1Q9Y6C2 1016 aa29.16■■■□□ 2.26
PCGF3-204ENST00000427463 PTGER2P43116 358 aa29.15■■■□□ 2.26
PCGF3-204ENST00000427463 PRIM1P49642 420 aaKnown RBP29.15■■■□□ 2.26
PCGF3-204ENST00000427463 RAPGEF4Q8WZA2 1011 aa29.15■■■□□ 2.26
PCGF3-204ENST00000427463 PKD1L3Q7Z443 1732 aa29.14■■■□□ 2.26
PCGF3-204ENST00000427463 SYTL4Q96C24 671 aaPredicted RBP29.14■■■□□ 2.26
PCGF3-204ENST00000427463 ZNF827Q17R98 1081 aa29.13■■■□□ 2.25
PCGF3-204ENST00000427463 SLC27A3Q5K4L6 730 aa29.12■■■□□ 2.25
PCGF3-204ENST00000427463 CCER1Q8TC90 406 aaPredicted RBP29.12■■■□□ 2.25
PCGF3-204ENST00000427463 ATF5Q9Y2D1 282 aaPredicted RBP29.12■■■□□ 2.25
PCGF3-204ENST00000427463 NCAPD2Q15021 1401 aa29.11■■■□□ 2.25
PCGF3-204ENST00000427463 TATP17735 454 aaPredicted RBP29.11■■■□□ 2.25
PCGF3-204ENST00000427463 EIF4G2P78344 907 aaKnown RBP eCLIP29.11■■■□□ 2.253e-6■■■■■ 28.1
PCGF3-204ENST00000427463 HSPA5P11021 654 aaKnown RBP29.1■■■□□ 2.25
PCGF3-204ENST00000427463 POLR3GLQ9BT43 218 aa29.1■■■□□ 2.25
PCGF3-204ENST00000427463 MTFR1LQ9H019 292 aa29.1■■■□□ 2.25
PCGF3-204ENST00000427463 TOGARAM1Q9Y4F4 1720 aa29.08■■■□□ 2.25
PCGF3-204ENST00000427463 ITGB4P16144 1822 aa29.08■■■□□ 2.25
PCGF3-204ENST00000427463 AKT1S1Q96B36 256 aa29.08■■■□□ 2.25
PCGF3-204ENST00000427463 PPM1GO15355 546 aaPredicted RBP29.07■■■□□ 2.24
PCGF3-204ENST00000427463 SGIP1Q9BQI5 828 aa29.07■■■□□ 2.24
PCGF3-204ENST00000427463 PCDH11XQ9BZA7 1347 aa29.07■■■□□ 2.24
PCGF3-204ENST00000427463 PCDH11YQ9BZA8 1340 aa29.07■■■□□ 2.24
PCGF3-204ENST00000427463 WASHC2AQ641Q2 1341 aa29.05■■■□□ 2.24
PCGF3-204ENST00000427463 KCNQ4P56696 695 aa29.05■■■□□ 2.24
PCGF3-204ENST00000427463 COL24A1Q17RW2 1714 aa29.05■■■□□ 2.24
PCGF3-204ENST00000427463 POLKQ9UBT6 870 aa29.03■■■□□ 2.24
PCGF3-204ENST00000427463 C5P01031 1676 aa29.02■■■□□ 2.24
PCGF3-204ENST00000427463 TAF1LQ8IZX4 1826 aa29.01■■■□□ 2.24
PCGF3-204ENST00000427463 CYP27B1O15528 508 aa29.01■■■□□ 2.23
PCGF3-204ENST00000427463 PNPLA7Q6ZV29 1317 aa28.99■■■□□ 2.23
PCGF3-204ENST00000427463 CCNL1Q9UK58 526 aaPredicted RBP28.99■■■□□ 2.23
PCGF3-204ENST00000427463 EYA1Q99502 592 aa28.98■■■□□ 2.23
PCGF3-204ENST00000427463 FHDC1Q9C0D6 1143 aaPredicted RBP28.98■■■□□ 2.23
PCGF3-204ENST00000427463 PANK3Q9H999 370 aa28.98■■■□□ 2.23
PCGF3-204ENST00000427463 TNNT2P45379 298 aaPredicted RBP28.96■■■□□ 2.23
PCGF3-204ENST00000427463 TFCP2L1Q9NZI6 479 aa28.96■■■□□ 2.23
PCGF3-204ENST00000427463 DCAF8L1A6NGE4 600 aa28.95■■■□□ 2.22
PCGF3-204ENST00000427463 SYT17Q9BSW7 474 aa28.95■■■□□ 2.22
PCGF3-204ENST00000427463 SLC16A10Q8TF71 515 aa28.94■■■□□ 2.22
PCGF3-204ENST00000427463 ARXQ96QS3 562 aa28.94■■■□□ 2.22
PCGF3-204ENST00000427463 UTRNP46939 3433 aa28.94■■■□□ 2.22
PCGF3-204ENST00000427463 PALLDQ8WX93 1383 aa28.92■■■□□ 2.22
PCGF3-204ENST00000427463 MAP3K5Q99683 1374 aa28.92■■■□□ 2.22
PCGF3-204ENST00000427463 EIF4A2Q14240 407 aaKnown RBP28.92■■■□□ 2.22
PCGF3-204ENST00000427463 MPRIPQ6WCQ1 1025 aa28.92■■■□□ 2.22
PCGF3-204ENST00000427463 SPG7Q9UQ90 795 aa28.92■■■□□ 2.22
PCGF3-204ENST00000427463 NKX1-1Q15270 411 aaPredicted RBP28.91■■■□□ 2.22
PCGF3-204ENST00000427463 YY1P25490 414 aa28.9■■■□□ 2.22
PCGF3-204ENST00000427463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.9■■■□□ 2.22
PCGF3-204ENST00000427463 C4BP0C0L5 1744 aa28.88■■■□□ 2.21
PCGF3-204ENST00000427463 IGSF1Q8N6C5 1336 aa28.87■■■□□ 2.21
PCGF3-204ENST00000427463 PLEKHG2Q9H7P9 1386 aa28.87■■■□□ 2.21
PCGF3-204ENST00000427463 CHD4Q14839 1912 aa28.86■■■□□ 2.21
PCGF3-204ENST00000427463 PIGBQ92521 554 aa28.85■■■□□ 2.21
PCGF3-204ENST00000427463 UBR3Q6ZT12 1888 aa28.85■■■□□ 2.21
PCGF3-204ENST00000427463 POLD1P28340 1107 aa28.84■■■□□ 2.21
PCGF3-204ENST00000427463 SMARCC1Q92922 1105 aaPredicted RBP28.84■■■□□ 2.21
PCGF3-204ENST00000427463 PHKG2P15735 406 aa28.83■■■□□ 2.21
PCGF3-204ENST00000427463 COL23A1Q86Y22 540 aaPredicted RBP28.83■■■□□ 2.21
PCGF3-204ENST00000427463 IFNL2Q8IZJ0 200 aa28.82■■■□□ 2.2
PCGF3-204ENST00000427463 MORC1Q86VD1 984 aa28.81■■■□□ 2.2
PCGF3-204ENST00000427463 GOLGB1Q14789 3259 aaKnown RBP28.81■■■□□ 2.2
PCGF3-204ENST00000427463 KIF7Q2M1P5 1343 aa28.8■■■□□ 2.2
PCGF3-204ENST00000427463 KNSTRNQ9Y448 316 aa28.8■■■□□ 2.2
PCGF3-204ENST00000427463 MSH5O43196 834 aa28.79■■■□□ 2.2
PCGF3-204ENST00000427463 HMGB2P26583 209 aaKnown RBP28.79■■■□□ 2.2
PCGF3-204ENST00000427463 TMOD3Q9NYL9 352 aa28.78■■■□□ 2.2
PCGF3-204ENST00000427463 KLHL34Q8N239 644 aa28.76■■■□□ 2.19
PCGF3-204ENST00000427463 AMER1Q5JTC6 1135 aaPredicted RBP28.75■■■□□ 2.19
PCGF3-204ENST00000427463 ASAP1Q9ULH1 1129 aa28.75■■■□□ 2.19
PCGF3-204ENST00000427463 LOC102724428A0A0B4J2F2 783 aa28.74■■■□□ 2.19
PCGF3-204ENST00000427463 SIK1P57059 783 aa28.74■■■□□ 2.19
PCGF3-204ENST00000427463 FLAD1Q8NFF5 587 aa28.74■■■□□ 2.19
PCGF3-204ENST00000427463 MSL1Q68DK7 614 aa28.73■■■□□ 2.19
PCGF3-204ENST00000427463 AMIGO3Q86WK7 504 aa28.73■■■□□ 2.19
PCGF3-204ENST00000427463 AK7Q96M32 723 aa28.73■■■□□ 2.19
PCGF3-204ENST00000427463 ZNF831Q5JPB2 1677 aa28.72■■■□□ 2.19
PCGF3-204ENST00000427463 AEBP1Q8IUX7 1158 aa28.71■■■□□ 2.19
PCGF3-204ENST00000427463 KDM6AO15550 1401 aaPredicted RBP28.7■■■□□ 2.19
PCGF3-204ENST00000427463 PLEKHO1Q53GL0 409 aaPredicted RBP28.7■■■□□ 2.18
PCGF3-204ENST00000427463 LINC00116Q8NCU8 138 aa28.7■■■□□ 2.18
PCGF3-204ENST00000427463 ATG3Q9NT62 314 aa28.7■■■□□ 2.18
PCGF3-204ENST00000427463 NLGN2Q8NFZ4 835 aa28.69■■■□□ 2.18
PCGF3-204ENST00000427463 KDRP35968 1356 aa28.69■■■□□ 2.18
PCGF3-204ENST00000427463 HSP90AB1P08238 724 aaKnown RBP28.68■■■□□ 2.18
PCGF3-204ENST00000427463 ITPK1Q13572 414 aa28.68■■■□□ 2.18
PCGF3-204ENST00000427463 ZNF530Q6P9A1 599 aaPredicted RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms