RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 ZCRB1Q8TBF4 217 aaKnown RBP33.93■■■■□ 3.02
HERPUD2-205ENST00000427455 SF3B2Q13435 895 aaKnown RBP33.92■■■■□ 3.02
HERPUD2-205ENST00000427455 PLEKHG2Q9H7P9 1386 aa33.92■■■■□ 3.02
HERPUD2-205ENST00000427455 SBF2Q86WG5 1849 aa33.91■■■■□ 3.02
HERPUD2-205ENST00000427455 DIAPH1O60610 1272 aaKnown RBP33.91■■■■□ 3.02
HERPUD2-205ENST00000427455 CFAP53Q96M91 514 aa33.89■■■■□ 3.02
HERPUD2-205ENST00000427455 TRIM37O94972 964 aa33.88■■■■□ 3.01
HERPUD2-205ENST00000427455 RALBP1Q15311 655 aa33.88■■■■□ 3.01
HERPUD2-205ENST00000427455 DDX54Q8TDD1 881 aaKnown RBP33.88■■■■□ 3.01
HERPUD2-205ENST00000427455 KDRP35968 1356 aa33.87■■■■□ 3.01
HERPUD2-205ENST00000427455 PCDH11XQ9BZA7 1347 aa33.86■■■■□ 3.01
HERPUD2-205ENST00000427455 PCDH11YQ9BZA8 1340 aa33.86■■■■□ 3.01
HERPUD2-205ENST00000427455 NHSQ6T4R5 1651 aa33.84■■■■□ 3.01
HERPUD2-205ENST00000427455 AEBP1Q8IUX7 1158 aa33.84■■■■□ 3.01
HERPUD2-205ENST00000427455 SULT6B1Q6IMI4 303 aa33.83■■■■□ 3.01
HERPUD2-205ENST00000427455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.83■■■■□ 3.017e-8■■□□□ 12.6
HERPUD2-205ENST00000427455 SPG7Q9UQ90 795 aa33.82■■■■□ 3
HERPUD2-205ENST00000427455 BAG6P46379 1132 aa33.81■■■■□ 3
HERPUD2-205ENST00000427455 BCL11BQ9C0K0 894 aaPredicted RBP33.79■■■■□ 3
HERPUD2-205ENST00000427455 DOT1LQ8TEK3 1739 aa33.79■■■■□ 3
HERPUD2-205ENST00000427455 DEFB132Q7Z7B7 95 aa33.78■■■■□ 3
HERPUD2-205ENST00000427455 U2SURPO15042 1029 aaKnown RBP33.76■■■□□ 2.99
HERPUD2-205ENST00000427455 CYP27B1O15528 508 aa33.76■■■□□ 2.99
HERPUD2-205ENST00000427455 APBA3O96018 575 aa33.75■■■□□ 2.99
HERPUD2-205ENST00000427455 MYBBP1AQ9BQG0 1328 aaKnown RBP33.75■■■□□ 2.99
HERPUD2-205ENST00000427455 HMOX1P09601 288 aa33.74■■■□□ 2.99
HERPUD2-205ENST00000427455 ACSBG1Q96GR2 724 aa33.74■■■□□ 2.99
HERPUD2-205ENST00000427455 NUDCQ9Y266 331 aa33.74■■■□□ 2.99
HERPUD2-205ENST00000427455 RGPD3A6NKT7 1758 aaPredicted RBP33.73■■■□□ 2.99
HERPUD2-205ENST00000427455 RGPD4Q7Z3J3 1758 aa33.73■■■□□ 2.99
HERPUD2-205ENST00000427455 PLEKHO1Q53GL0 409 aaPredicted RBP33.73■■■□□ 2.99
HERPUD2-205ENST00000427455 AMOTQ4VCS5 1084 aa33.72■■■□□ 2.99
HERPUD2-205ENST00000427455 PRKRIP1Q9H875 184 aaPredicted RBP33.72■■■□□ 2.99
HERPUD2-205ENST00000427455 KCNQ2O43526 872 aa33.71■■■□□ 2.99
HERPUD2-205ENST00000427455 PTF1AQ7RTS3 328 aa33.71■■■□□ 2.99
HERPUD2-205ENST00000427455 EN1Q05925 392 aaPredicted RBP33.7■■■□□ 2.99
HERPUD2-205ENST00000427455 IFNL2Q8IZJ0 200 aa33.69■■■□□ 2.98
HERPUD2-205ENST00000427455 BTAF1O14981 1849 aa33.69■■■□□ 2.98
HERPUD2-205ENST00000427455 KAT6BQ8WYB5 2073 aa33.68■■■□□ 2.98
HERPUD2-205ENST00000427455 TOGARAM1Q9Y4F4 1720 aa33.68■■■□□ 2.98
HERPUD2-205ENST00000427455 PHKG2P15735 406 aa33.68■■■□□ 2.98
HERPUD2-205ENST00000427455 NKX1-1Q15270 411 aaPredicted RBP33.67■■■□□ 2.98
HERPUD2-205ENST00000427455 RREB1Q92766 1687 aa33.65■■■□□ 2.98
HERPUD2-205ENST00000427455 ZNF530Q6P9A1 599 aaPredicted RBP33.65■■■□□ 2.98
HERPUD2-205ENST00000427455 CAMKK2Q96RR4 588 aa33.65■■■□□ 2.98
HERPUD2-205ENST00000427455 PRIM1P49642 420 aaKnown RBP33.64■■■□□ 2.98
HERPUD2-205ENST00000427455 SYTL4Q96C24 671 aaPredicted RBP33.64■■■□□ 2.98
HERPUD2-205ENST00000427455 PLSCR1O15162 318 aa33.63■■■□□ 2.97
HERPUD2-205ENST00000427455 U2AF1L5P0DN76 240 aaPredicted RBP33.63■■■□□ 2.97
HERPUD2-205ENST00000427455 U2AF1Q01081 240 aaKnown RBP eCLIP33.63■■■□□ 2.97
HERPUD2-205ENST00000427455 EZH2Q15910 746 aaKnown RBP33.63■■■□□ 2.97
HERPUD2-205ENST00000427455 HSP90AB1P08238 724 aaKnown RBP33.61■■■□□ 2.97
HERPUD2-205ENST00000427455 C1orf141Q5JVX7 400 aa33.6■■■□□ 2.97
HERPUD2-205ENST00000427455 RSPH6AQ9H0K4 717 aa33.6■■■□□ 2.97
HERPUD2-205ENST00000427455 ITGB4P16144 1822 aa33.59■■■□□ 2.97
HERPUD2-205ENST00000427455 NUP188Q5SRE5 1749 aa33.57■■■□□ 2.96
HERPUD2-205ENST00000427455 PRKAR2BP31323 418 aa33.57■■■□□ 2.96
HERPUD2-205ENST00000427455 FCHSD2O94868 740 aa33.56■■■□□ 2.96
HERPUD2-205ENST00000427455 DCAF5Q96JK2 942 aa33.56■■■□□ 2.96
HERPUD2-205ENST00000427455 KDM6AO15550 1401 aaPredicted RBP33.55■■■□□ 2.96
HERPUD2-205ENST00000427455 MTHFSDQ2M296 383 aaKnown RBP33.54■■■□□ 2.96
HERPUD2-205ENST00000427455 AKAP4Q5JQC9 854 aa33.54■■■□□ 2.96
HERPUD2-205ENST00000427455 MPRIPQ6WCQ1 1025 aa33.52■■■□□ 2.96
HERPUD2-205ENST00000427455 ANP32CO43423 234 aa33.51■■■□□ 2.95
HERPUD2-205ENST00000427455 GAS2L2Q8NHY3 880 aa33.51■■■□□ 2.95
HERPUD2-205ENST00000427455 SCN11AQ9UI33 1791 aa33.5■■■□□ 2.95
HERPUD2-205ENST00000427455 ERVV-2B6SEH9 535 aa33.49■■■□□ 2.95
HERPUD2-205ENST00000427455 LY75O60449 1722 aa33.49■■■□□ 2.95
HERPUD2-205ENST00000427455 TMOD3Q9NYL9 352 aa33.49■■■□□ 2.95
HERPUD2-205ENST00000427455 TXNRD1Q16881 649 aa33.48■■■□□ 2.95
HERPUD2-205ENST00000427455 PHACTR3Q96KR7 559 aa33.48■■■□□ 2.95
HERPUD2-205ENST00000427455 ADAMTS7Q9UKP4 1686 aa33.48■■■□□ 2.95
HERPUD2-205ENST00000427455 PROM2Q8N271 834 aa33.47■■■□□ 2.95
HERPUD2-205ENST00000427455 PIGBQ92521 554 aa33.47■■■□□ 2.95
HERPUD2-205ENST00000427455 VIRMAQ69YN4 1812 aaKnown RBP33.46■■■□□ 2.95
HERPUD2-205ENST00000427455 MAP3K5Q99683 1374 aa33.46■■■□□ 2.95
HERPUD2-205ENST00000427455 MRC1P22897 1456 aa33.44■■■□□ 2.94
HERPUD2-205ENST00000427455 PNNQ9H307 717 aaKnown RBP33.43■■■□□ 2.94
HERPUD2-205ENST00000427455 NEFMP07197 916 aa33.42■■■□□ 2.94
HERPUD2-205ENST00000427455 PALLDQ8WX93 1383 aa33.42■■■□□ 2.94
HERPUD2-205ENST00000427455 CABP4P57796 275 aa33.41■■■□□ 2.94
HERPUD2-205ENST00000427455 WDR43Q15061 677 aaKnown RBP eCLIP33.41■■■□□ 2.94
HERPUD2-205ENST00000427455 SLC27A3Q5K4L6 730 aa33.41■■■□□ 2.94
HERPUD2-205ENST00000427455 SMARCC1Q92922 1105 aaPredicted RBP33.41■■■□□ 2.94
HERPUD2-205ENST00000427455 PAPPAQ13219 1627 aa33.4■■■□□ 2.94
HERPUD2-205ENST00000427455 GNAT3A8MTJ3 354 aa33.4■■■□□ 2.94
HERPUD2-205ENST00000427455 RNMTO43148 476 aaKnown RBP33.4■■■□□ 2.94
HERPUD2-205ENST00000427455 PLEKHF1Q96S99 279 aa33.4■■■□□ 2.94
HERPUD2-205ENST00000427455 NBPF14Q5TI25 921 aa33.38■■■□□ 2.93
HERPUD2-205ENST00000427455 LGR6Q9HBX8 967 aa33.38■■■□□ 2.93
HERPUD2-205ENST00000427455 MAPK8IP3Q9UPT6 1336 aa33.37■■■□□ 2.93
HERPUD2-205ENST00000427455 SLC52A2Q9HAB3 445 aa33.35■■■□□ 2.93
HERPUD2-205ENST00000427455 LRRC4BQ9NT99 713 aa33.35■■■□□ 2.93
HERPUD2-205ENST00000427455 CCNL1Q9UK58 526 aaPredicted RBP33.35■■■□□ 2.93
HERPUD2-205ENST00000427455 NFATC2IPQ8NCF5 419 aa33.34■■■□□ 2.93
HERPUD2-205ENST00000427455 ASAP1Q9ULH1 1129 aa33.34■■■□□ 2.93
HERPUD2-205ENST00000427455 ANO8Q9HCE9 1232 aaPredicted RBP33.33■■■□□ 2.93
HERPUD2-205ENST00000427455 ATG3Q9NT62 314 aa33.33■■■□□ 2.93
HERPUD2-205ENST00000427455 CEMIPQ8WUJ3 1361 aa33.32■■■□□ 2.92
HERPUD2-205ENST00000427455 R3HDM1Q15032 1099 aaKnown RBP33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms