RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 GIGYF1O75420 1035 aaPredicted RBP19.34■□□□□ 0.69
VEGFB-202ENST00000426086 POLD1P28340 1107 aa19.34■□□□□ 0.69
VEGFB-202ENST00000426086 SYTL4Q96C24 671 aaPredicted RBP19.34■□□□□ 0.69
VEGFB-202ENST00000426086 RGPD2P0DJD1 1756 aa19.34■□□□□ 0.69
VEGFB-202ENST00000426086 ANKRD36BQ8N2N9 1353 aa19.33■□□□□ 0.69
VEGFB-202ENST00000426086 HDGFL2Q7Z4V5 671 aaPredicted RBP19.32■□□□□ 0.68
VEGFB-202ENST00000426086 COL23A1Q86Y22 540 aaPredicted RBP19.31■□□□□ 0.68
VEGFB-202ENST00000426086 MEGF6O75095 1541 aa19.3■□□□□ 0.68
VEGFB-202ENST00000426086 MAP3K19Q56UN5 1328 aa19.29■□□□□ 0.68
VEGFB-202ENST00000426086 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
VEGFB-202ENST00000426086 HOXC9P31274 260 aa19.28■□□□□ 0.68
VEGFB-202ENST00000426086 MSL1Q68DK7 614 aa19.28■□□□□ 0.68
VEGFB-202ENST00000426086 CCNL1Q9UK58 526 aaPredicted RBP19.28■□□□□ 0.68
VEGFB-202ENST00000426086 ZCRB1Q8TBF4 217 aaKnown RBP19.27■□□□□ 0.68
VEGFB-202ENST00000426086 IFFO2Q5TF58 517 aa19.26■□□□□ 0.67
VEGFB-202ENST00000426086 TERF2IPQ9NYB0 399 aa19.26■□□□□ 0.67
VEGFB-202ENST00000426086 MSH5O43196 834 aa19.25■□□□□ 0.67
VEGFB-202ENST00000426086 USHBP1Q8N6Y0 703 aa19.24■□□□□ 0.67
VEGFB-202ENST00000426086 AMPHP49418 695 aa19.23■□□□□ 0.67
VEGFB-202ENST00000426086 NBPF6Q5VWK0 638 aa19.23■□□□□ 0.67
VEGFB-202ENST00000426086 NBPF4Q96M43 638 aa19.23■□□□□ 0.67
VEGFB-202ENST00000426086 ATP10DQ9P241 1426 aa19.23■□□□□ 0.67
VEGFB-202ENST00000426086 GRIN3BO60391 1043 aa19.22■□□□□ 0.67
VEGFB-202ENST00000426086 USP47Q96K76 1375 aa19.21■□□□□ 0.67
VEGFB-202ENST00000426086 RRS1Q15050 365 aaKnown RBP19.21■□□□□ 0.67
VEGFB-202ENST00000426086 AMIGO3Q86WK7 504 aa19.21■□□□□ 0.67
VEGFB-202ENST00000426086 COG3Q96JB2 828 aa19.21■□□□□ 0.67
VEGFB-202ENST00000426086 C5P01031 1676 aa19.2■□□□□ 0.66
VEGFB-202ENST00000426086 SMIM5Q71RC9 77 aa19.2■□□□□ 0.66
VEGFB-202ENST00000426086 PUS7Q96PZ0 661 aaKnown RBP19.2■□□□□ 0.66
VEGFB-202ENST00000426086 TESK2Q96S53 571 aa19.2■□□□□ 0.66
VEGFB-202ENST00000426086 TAF1LQ8IZX4 1826 aa19.18■□□□□ 0.66
VEGFB-202ENST00000426086 TOGARAM1Q9Y4F4 1720 aa19.17■□□□□ 0.66
VEGFB-202ENST00000426086 WWC3Q9ULE0 1092 aa19.17■□□□□ 0.66
VEGFB-202ENST00000426086 ADCY9O60503 1353 aa19.17■□□□□ 0.66
VEGFB-202ENST00000426086 CD2APQ9Y5K6 639 aa19.16■□□□□ 0.66
VEGFB-202ENST00000426086 PALLDQ8WX93 1383 aa19.16■□□□□ 0.66
VEGFB-202ENST00000426086 ZNF526Q8TF50 670 aaPredicted RBP19.15■□□□□ 0.66
VEGFB-202ENST00000426086 GGNBP2Q9H3C7 697 aa19.15■□□□□ 0.66
VEGFB-202ENST00000426086 RTL1A6NKG5 1358 aa19.15■□□□□ 0.66
VEGFB-202ENST00000426086 ST20-MTHFSA0A0A6YYL1 179 aa19.14■□□□□ 0.65
VEGFB-202ENST00000426086 FYB1O15117 783 aa19.14■□□□□ 0.65
VEGFB-202ENST00000426086 C4BP0C0L5 1744 aa19.14■□□□□ 0.65
VEGFB-202ENST00000426086 CYP27B1O15528 508 aa19.13■□□□□ 0.65
VEGFB-202ENST00000426086 HSP90AB2PQ58FF8 381 aa19.13■□□□□ 0.65
VEGFB-202ENST00000426086 MPRIPQ6WCQ1 1025 aa19.13■□□□□ 0.65
VEGFB-202ENST00000426086 RAPGEF4Q8WZA2 1011 aa19.13■□□□□ 0.65
VEGFB-202ENST00000426086 GPBP1L1Q9HC44 474 aaPredicted RBP19.13■□□□□ 0.65
VEGFB-202ENST00000426086 GOLGB1Q14789 3259 aaKnown RBP19.12■□□□□ 0.65
VEGFB-202ENST00000426086 ITGB4P16144 1822 aa19.11■□□□□ 0.65
VEGFB-202ENST00000426086 CGNL1Q0VF96 1302 aa19.11■□□□□ 0.65
VEGFB-202ENST00000426086 TATP17735 454 aaPredicted RBP19.11■□□□□ 0.65
VEGFB-202ENST00000426086 UBR3Q6ZT12 1888 aa19.1■□□□□ 0.65
VEGFB-202ENST00000426086 IGSF1Q8N6C5 1336 aa19.1■□□□□ 0.65
VEGFB-202ENST00000426086 PCDH11XQ9BZA7 1347 aa19.1■□□□□ 0.65
VEGFB-202ENST00000426086 PCDH11YQ9BZA8 1340 aa19.1■□□□□ 0.65
VEGFB-202ENST00000426086 HSPA6P17066 643 aa19.1■□□□□ 0.65
VEGFB-202ENST00000426086 PHF14O94880 888 aa19.09■□□□□ 0.65
VEGFB-202ENST00000426086 FLAD1Q8NFF5 587 aa19.09■□□□□ 0.65
VEGFB-202ENST00000426086 INSRP06213 1382 aa19.08■□□□□ 0.65
VEGFB-202ENST00000426086 MAP2P11137 1827 aaKnown RBP19.07■□□□□ 0.64
VEGFB-202ENST00000426086 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.07■□□□□ 0.64
VEGFB-202ENST00000426086 PIGBQ92521 554 aa19.07■□□□□ 0.64
VEGFB-202ENST00000426086 AK7Q96M32 723 aa19.07■□□□□ 0.64
VEGFB-202ENST00000426086 SMG6Q86US8 1419 aaKnown RBP19.07■□□□□ 0.64
VEGFB-202ENST00000426086 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
VEGFB-202ENST00000426086 KIF3CO14782 793 aa19.06■□□□□ 0.64
VEGFB-202ENST00000426086 LINC00116Q8NCU8 138 aa19.06■□□□□ 0.64
VEGFB-202ENST00000426086 PKD1L3Q7Z443 1732 aa19.05■□□□□ 0.64
VEGFB-202ENST00000426086 EMILIN1Q9Y6C2 1016 aa19.04■□□□□ 0.64
VEGFB-202ENST00000426086 FLT4P35916 1363 aa19.04■□□□□ 0.64
VEGFB-202ENST00000426086 KIF20BQ96Q89 1820 aa19.03■□□□□ 0.64
VEGFB-202ENST00000426086 ITPK1Q13572 414 aa19.03■□□□□ 0.64
VEGFB-202ENST00000426086 SMARCC1Q92922 1105 aaPredicted RBP19.03■□□□□ 0.64
VEGFB-202ENST00000426086 NCAPD2Q15021 1401 aa19.01■□□□□ 0.63
VEGFB-202ENST00000426086 KIAA1551Q9HCM1 1747 aa19.01■□□□□ 0.63
VEGFB-202ENST00000426086 LOC102724428A0A0B4J2F2 783 aa19.01■□□□□ 0.63
VEGFB-202ENST00000426086 SIK1P57059 783 aa19.01■□□□□ 0.63
VEGFB-202ENST00000426086 NKX1-1Q15270 411 aaPredicted RBP19.01■□□□□ 0.63
VEGFB-202ENST00000426086 ASAP1Q9ULH1 1129 aa19.01■□□□□ 0.63
VEGFB-202ENST00000426086 CEP350Q5VT06 3117 aa19.01■□□□□ 0.63
VEGFB-202ENST00000426086 CICQ96RK0 1608 aaPredicted RBP19■□□□□ 0.63
VEGFB-202ENST00000426086 SSFA2P28290 1259 aa19■□□□□ 0.63
VEGFB-202ENST00000426086 CARD14Q9BXL6 1004 aa19■□□□□ 0.63
VEGFB-202ENST00000426086 PXDNLA1KZ92 1463 aa18.99■□□□□ 0.63
VEGFB-202ENST00000426086 KIF24Q5T7B8 1368 aa18.98■□□□□ 0.63
VEGFB-202ENST00000426086 GNPATO15228 680 aa18.98■□□□□ 0.63
VEGFB-202ENST00000426086 N4BP2Q86UW6 1770 aaPredicted RBP18.97■□□□□ 0.63
VEGFB-202ENST00000426086 MMP10P09238 476 aa18.97■□□□□ 0.63
VEGFB-202ENST00000426086 NSD3Q9BZ95 1437 aa18.97■□□□□ 0.63
VEGFB-202ENST00000426086 TMF1P82094 1093 aa18.96■□□□□ 0.63
VEGFB-202ENST00000426086 KIF13BQ9NQT8 1826 aa18.95■□□□□ 0.62
VEGFB-202ENST00000426086 PPM1GO15355 546 aaPredicted RBP18.95■□□□□ 0.62
VEGFB-202ENST00000426086 HMGB2P26583 209 aaKnown RBP18.95■□□□□ 0.62
VEGFB-202ENST00000426086 ATP6V1AP38606 617 aa18.95■□□□□ 0.62
VEGFB-202ENST00000426086 EYA1Q99502 592 aa18.95■□□□□ 0.62
VEGFB-202ENST00000426086 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
VEGFB-202ENST00000426086 ANKRD26Q9UPS8 1709 aa18.94■□□□□ 0.62
VEGFB-202ENST00000426086 SLC4A9Q96Q91 983 aa18.94■□□□□ 0.62
VEGFB-202ENST00000426086 TMOD3Q9NYL9 352 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms