RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 LRRC59Q96AG4 307 aaKnown RBP19.6■□□□□ 0.73
ACTB-204ENST00000425660 LRRC37A3O60309 1634 aa19.6■□□□□ 0.73
ACTB-204ENST00000425660 ALDH1L2Q3SY69 923 aa19.6■□□□□ 0.73
ACTB-204ENST00000425660 RTF1Q92541 710 aaKnown RBP19.6■□□□□ 0.73
ACTB-204ENST00000425660 GNAT3A8MTJ3 354 aa19.59■□□□□ 0.73
ACTB-204ENST00000425660 BRPF1P55201 1214 aaPredicted RBP19.59■□□□□ 0.73
ACTB-204ENST00000425660 RGPD2P0DJD1 1756 aa19.59■□□□□ 0.73
ACTB-204ENST00000425660 MAP3K5Q99683 1374 aa19.58■□□□□ 0.73
ACTB-204ENST00000425660 SSH1Q8WYL5 1049 aa19.58■□□□□ 0.73
ACTB-204ENST00000425660 KIAA0232Q92628 1395 aa19.58■□□□□ 0.72
ACTB-204ENST00000425660 VAMP4O75379 141 aa19.57■□□□□ 0.72
ACTB-204ENST00000425660 BCL2L13Q9BXK5 485 aa19.57■□□□□ 0.72
ACTB-204ENST00000425660 PLEKHG2Q9H7P9 1386 aa19.56■□□□□ 0.72
ACTB-204ENST00000425660 PIP4K2BP78356 416 aa19.56■□□□□ 0.72
ACTB-204ENST00000425660 SMC4Q9NTJ3 1288 aa19.56■□□□□ 0.72
ACTB-204ENST00000425660 RGPD5Q99666 1765 aa19.56■□□□□ 0.72
ACTB-204ENST00000425660 CANXP27824 592 aaKnown RBP19.55■□□□□ 0.72
ACTB-204ENST00000425660 AMOTQ4VCS5 1084 aa19.55■□□□□ 0.72
ACTB-204ENST00000425660 FRAT1Q92837 279 aaPredicted RBP19.55■□□□□ 0.72
ACTB-204ENST00000425660 FAM208AQ9UK61 1670 aaKnown RBP19.55■□□□□ 0.72
ACTB-204ENST00000425660 TSPYL6Q8N831 410 aa19.55■□□□□ 0.72
ACTB-204ENST00000425660 CEMIPQ8WUJ3 1361 aa19.54■□□□□ 0.72
ACTB-204ENST00000425660 UBAP1LF5GYI3 381 aa19.54■□□□□ 0.72
ACTB-204ENST00000425660 AHDC1Q5TGY3 1603 aaPredicted RBP19.54■□□□□ 0.72
ACTB-204ENST00000425660 KIF16BQ96L93 1317 aa19.54■□□□□ 0.72
ACTB-204ENST00000425660 ABCA3Q99758 1704 aa19.53■□□□□ 0.72
ACTB-204ENST00000425660 TWISTNBQ3B726 338 aaPredicted RBP19.53■□□□□ 0.72
ACTB-204ENST00000425660 ZKSCAN2Q63HK3 967 aa19.53■□□□□ 0.72
ACTB-204ENST00000425660 C8orf58Q8NAV2 365 aa19.53■□□□□ 0.72
ACTB-204ENST00000425660 IL17REQ8NFR9 667 aa19.53■□□□□ 0.72
ACTB-204ENST00000425660 ROBO1Q9Y6N7 1651 aa19.53■□□□□ 0.72
ACTB-204ENST00000425660 PLEKHO1Q53GL0 409 aaPredicted RBP19.53■□□□□ 0.72
ACTB-204ENST00000425660 BABAM1Q9NWV8 329 aa19.53■□□□□ 0.72
ACTB-204ENST00000425660 MS4A1P11836 297 aa19.51■□□□□ 0.71
ACTB-204ENST00000425660 HAP1P54257 671 aaPredicted RBP19.51■□□□□ 0.71
ACTB-204ENST00000425660 CHRNA2Q15822 529 aa19.51■□□□□ 0.71
ACTB-204ENST00000425660 AKAP4Q5JQC9 854 aa19.51■□□□□ 0.71
ACTB-204ENST00000425660 PANK1Q8TE04 598 aa19.51■□□□□ 0.71
ACTB-204ENST00000425660 AAMPQ13685 434 aa19.51■□□□□ 0.71
ACTB-204ENST00000425660 RLBP1P12271 317 aa19.5■□□□□ 0.71
ACTB-204ENST00000425660 ATF7IPQ6VMQ6 1270 aa19.5■□□□□ 0.71
ACTB-204ENST00000425660 TOM1O60784 492 aa19.49■□□□□ 0.71
ACTB-204ENST00000425660 TRIM27P14373 513 aa19.49■□□□□ 0.71
ACTB-204ENST00000425660 OVOS2A0A0G2JMS6 1433 aa19.49■□□□□ 0.71
ACTB-204ENST00000425660 IPO8O15397 1037 aaKnown RBP19.48■□□□□ 0.71
ACTB-204ENST00000425660 PRDM11Q9NQV5 511 aa19.48■□□□□ 0.71
ACTB-204ENST00000425660 NLRP2Q9NX02 1062 aa19.48■□□□□ 0.71
ACTB-204ENST00000425660 TSPYL4Q9UJ04 414 aa19.48■□□□□ 0.71
ACTB-204ENST00000425660 NOB1Q9ULX3 412 aaKnown RBP19.48■□□□□ 0.71
ACTB-204ENST00000425660 DZIP1LQ8IYY4 767 aaKnown RBP19.48■□□□□ 0.71
ACTB-204ENST00000425660 MRPL50Q8N5N7 158 aaKnown RBP19.48■□□□□ 0.71
ACTB-204ENST00000425660 ARHGAP45Q92619 1136 aa19.48■□□□□ 0.71
ACTB-204ENST00000425660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.48■□□□□ 0.71
ACTB-204ENST00000425660 COG6Q9Y2V7 657 aa19.48■□□□□ 0.71
ACTB-204ENST00000425660 ELL2O00472 640 aaPredicted RBP19.47■□□□□ 0.71
ACTB-204ENST00000425660 ZNF530Q6P9A1 599 aaPredicted RBP19.47■□□□□ 0.71
ACTB-204ENST00000425660 TNNQ9UQP3 1299 aa19.47■□□□□ 0.71
ACTB-204ENST00000425660 TAF7Q15545 349 aaPredicted RBP19.46■□□□□ 0.71
ACTB-204ENST00000425660 COL5A2P05997 1499 aaPredicted RBP19.46■□□□□ 0.71
ACTB-204ENST00000425660 CSB-PGBD3P0DP91 1061 aa19.46■□□□□ 0.71
ACTB-204ENST00000425660 RAPGEF4Q8WZA2 1011 aa19.46■□□□□ 0.71
ACTB-204ENST00000425660 WDR17Q8IZU2 1322 aa19.46■□□□□ 0.71
ACTB-204ENST00000425660 MVPQ14764 893 aaKnown RBP19.45■□□□□ 0.7
ACTB-204ENST00000425660 KRT24Q2M2I5 525 aa19.45■□□□□ 0.7
ACTB-204ENST00000425660 FTSJ3Q8IY81 847 aaKnown RBP19.45■□□□□ 0.7
ACTB-204ENST00000425660 MIS18AQ9NYP9 233 aa19.45■□□□□ 0.7
ACTB-204ENST00000425660 SOS1Q07889 1333 aaPredicted RBP19.45■□□□□ 0.7
ACTB-204ENST00000425660 COL22A1Q8NFW1 1626 aaPredicted RBP19.45■□□□□ 0.7
ACTB-204ENST00000425660 ADAMTS7Q9UKP4 1686 aa19.45■□□□□ 0.7
ACTB-204ENST00000425660 MEGF6O75095 1541 aa19.44■□□□□ 0.7
ACTB-204ENST00000425660 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
ACTB-204ENST00000425660 CLUAP1Q96AJ1 413 aa19.44■□□□□ 0.7
ACTB-204ENST00000425660 KDM2BQ8NHM5 1336 aa19.44■□□□□ 0.7
ACTB-204ENST00000425660 LGR6Q9HBX8 967 aa19.43■□□□□ 0.7
ACTB-204ENST00000425660 TATP17735 454 aaPredicted RBP19.42■□□□□ 0.7
ACTB-204ENST00000425660 RNMTO43148 476 aaKnown RBP19.41■□□□□ 0.7
ACTB-204ENST00000425660 SPG7Q9UQ90 795 aa19.41■□□□□ 0.7
ACTB-204ENST00000425660 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
ACTB-204ENST00000425660 CENPQQ7L2Z9 268 aaPredicted RBP19.4■□□□□ 0.7
ACTB-204ENST00000425660 PKD1L3Q7Z443 1732 aa19.4■□□□□ 0.7
ACTB-204ENST00000425660 DDX19BQ9UMR2 479 aa19.39■□□□□ 0.7
ACTB-204ENST00000425660 COL16A1Q07092 1604 aaPredicted RBP19.39■□□□□ 0.69
ACTB-204ENST00000425660 ABCC4O15439 1325 aa19.38■□□□□ 0.69
ACTB-204ENST00000425660 KDM3BQ7LBC6 1761 aa19.38■□□□□ 0.69
ACTB-204ENST00000425660 TEFQ10587 303 aa19.38■□□□□ 0.69
ACTB-204ENST00000425660 CARD10Q9BWT7 1032 aa19.38■□□□□ 0.69
ACTB-204ENST00000425660 PHKG2P15735 406 aa19.37■□□□□ 0.69
ACTB-204ENST00000425660 TMEM57Q8N5G2 664 aa19.37■□□□□ 0.69
ACTB-204ENST00000425660 TOM1L2Q6ZVM7 507 aa19.37■□□□□ 0.69
ACTB-204ENST00000425660 API5Q9BZZ5 524 aaKnown RBP19.37■□□□□ 0.69
ACTB-204ENST00000425660 TCERG1O14776 1098 aaKnown RBP19.36■□□□□ 0.69
ACTB-204ENST00000425660 IFNL2Q8IZJ0 200 aa19.36■□□□□ 0.69
ACTB-204ENST00000425660 PTPRCP08575 1304 aa19.35■□□□□ 0.69
ACTB-204ENST00000425660 PARP4Q9UKK3 1724 aaKnown RBP19.35■□□□□ 0.69
ACTB-204ENST00000425660 KDM6AO15550 1401 aaPredicted RBP19.35■□□□□ 0.69
ACTB-204ENST00000425660 HOXB7P09629 217 aa19.35■□□□□ 0.69
ACTB-204ENST00000425660 EIF4A1P60842 406 aaKnown RBP19.35■□□□□ 0.69
ACTB-204ENST00000425660 ITPRIPQ8IWB1 547 aa19.35■□□□□ 0.69
ACTB-204ENST00000425660 TSHZ2Q9NRE2 1034 aa19.35■□□□□ 0.69
ACTB-204ENST00000425660 SIPA1L3O60292 1781 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms