RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RIMS2Q9UQ26 1411 aa9.25□□□□□ -0.93
SMARCC1-202ENST00000425518 TSHZ3Q63HK5 1081 aa9.25□□□□□ -0.93
SMARCC1-202ENST00000425518 NOL8Q76FK4 1167 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-202ENST00000425518 FAM69CQ0P6D2 419 aa9.25□□□□□ -0.93
SMARCC1-202ENST00000425518 HSP90AB2PQ58FF8 381 aa9.25□□□□□ -0.93
SMARCC1-202ENST00000425518 ALKQ9UM73 1620 aa9.25□□□□□ -0.93
SMARCC1-202ENST00000425518 HAP1P54257 671 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 CCDC173Q0VFZ6 552 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 RBM27Q9P2N5 1060 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 NEO1Q92859 1461 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 CHL1O00533 1208 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 REC8O95072 547 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 HSP90AA2PQ14568 343 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 NECTIN2Q92692 538 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 FOXO3O43524 673 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 NEK4P51957 841 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 EDC4Q6P2E9 1401 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 G2E3Q7L622 706 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 LMBRD1Q9NUN5 540 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 EXOC6BQ9Y2D4 811 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 CFAP74Q9C0B2 1584 aa9.24□□□□□ -0.93
SMARCC1-202ENST00000425518 DIP2CQ9Y2E4 1556 aa9.23□□□□□ -0.93
SMARCC1-202ENST00000425518 HMMRO75330 724 aa9.23□□□□□ -0.93
SMARCC1-202ENST00000425518 ERC2O15083 957 aa9.23□□□□□ -0.93
SMARCC1-202ENST00000425518 ZSCAN23Q3MJ62 389 aa9.23□□□□□ -0.93
SMARCC1-202ENST00000425518 FOXD4L6Q3SYB3 417 aaPredicted RBP9.23□□□□□ -0.93
SMARCC1-202ENST00000425518 FOXD4L3Q6VB84 417 aaPredicted RBP9.23□□□□□ -0.93
SMARCC1-202ENST00000425518 MSH6P52701 1360 aa9.23□□□□□ -0.93
SMARCC1-202ENST00000425518 MSNP26038 577 aaKnown RBP9.23□□□□□ -0.93
SMARCC1-202ENST00000425518 RTF1Q92541 710 aaKnown RBP9.23□□□□□ -0.93
SMARCC1-202ENST00000425518 CLEC17AQ6ZS10 378 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 ESF1Q9H501 851 aaKnown RBP9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 CWC22Q9HCG8 908 aaKnown RBP9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 TSPYL4Q9UJ04 414 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 RTL1A6NKG5 1358 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 METP08581 1390 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 ATP7BP35670 1465 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 RILPL2Q969X0 211 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 AATKQ6ZMQ8 1374 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 RBSNQ9H1K0 784 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 TMEM131LA2VDJ0 1609 aa9.22□□□□□ -0.93
SMARCC1-202ENST00000425518 PDE1AP54750 535 aa9.21□□□□□ -0.93
SMARCC1-202ENST00000425518 ZSCAN30Q86W11 494 aa9.21□□□□□ -0.93
SMARCC1-202ENST00000425518 CPSF1Q10570 1443 aaKnown RBP9.21□□□□□ -0.93
SMARCC1-202ENST00000425518 PPP1R9BQ96SB3 815 aa9.21□□□□□ -0.94
SMARCC1-202ENST00000425518 ZDHHC9Q9Y397 364 aa9.21□□□□□ -0.94
SMARCC1-202ENST00000425518 PTPRCP08575 1304 aa9.21□□□□□ -0.94
SMARCC1-202ENST00000425518 KIF24Q5T7B8 1368 aa9.21□□□□□ -0.94
SMARCC1-202ENST00000425518 PRR36Q9H6K5 1346 aa9.21□□□□□ -0.94
SMARCC1-202ENST00000425518 MYO5BQ9ULV0 1848 aa9.21□□□□□ -0.94
SMARCC1-202ENST00000425518 CYP2E1P05181 493 aaPredicted RBP9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 KIAA1211Q6ZU35 1233 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 GPT2Q8TD30 523 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 TTC21BQ7Z4L5 1316 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 ATP10DQ9P241 1426 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 CDK12Q9NYV4 1490 aaPredicted RBP9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 ZNF445P59923 1031 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 RNF214Q8ND24 703 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 ANO2Q9NQ90 1003 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 SYCE3A1L190 88 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 GNAI2P04899 355 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 TMX3Q96JJ7 454 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 MAP2P11137 1827 aaKnown RBP9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 ACEP12821 1306 aa9.2□□□□□ -0.94
SMARCC1-202ENST00000425518 CPS1P31327 1500 aa9.19□□□□□ -0.94
SMARCC1-202ENST00000425518 CDC42BPGQ6DT37 1551 aa9.19□□□□□ -0.94
SMARCC1-202ENST00000425518 FKBP5Q13451 457 aaPredicted RBP9.19□□□□□ -0.94
SMARCC1-202ENST00000425518 MTHFSDQ2M296 383 aaKnown RBP9.19□□□□□ -0.94
SMARCC1-202ENST00000425518 STK31Q9BXU1 1019 aa9.19□□□□□ -0.94
SMARCC1-202ENST00000425518 NSFL1CQ9UNZ2 370 aaKnown RBP9.19□□□□□ -0.94
SMARCC1-202ENST00000425518 GLIPR1L2Q4G1C9 344 aa9.19□□□□□ -0.94
SMARCC1-202ENST00000425518 CCT4P50991 539 aaKnown RBP9.19□□□□□ -0.94
SMARCC1-202ENST00000425518 UPF3BQ9BZI7 483 aaKnown RBP9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 TMEM63CQ9P1W3 806 aa9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 A2ML1A8K2U0 1454 aa9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 MCCP23508 829 aa9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 LRRCC1Q9C099 1032 aa9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 PALD1Q9ULE6 856 aa9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 ANKRD26Q9UPS8 1709 aa9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 AK9Q5TCS8 1911 aa9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 RGS12O14924 1447 aa9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 HDGFP51858 240 aaKnown RBP9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 PLPPR3Q6T4P5 718 aa9.18□□□□□ -0.94
SMARCC1-202ENST00000425518 PNMA6EA0A0J9YXQ4 647 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 RRP9O43818 475 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 AMPHP49418 695 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 ESYT1Q9BSJ8 1104 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 IL1RAPL2Q9NP60 686 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 PREX1Q8TCU6 1659 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 KIAA0232Q92628 1395 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 MAP3K19Q56UN5 1328 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 MX1P20591 662 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 VSIG10Q8N0Z9 540 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 GDPD2Q9HCC8 539 aa9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 R3HCC1Q9Y3T6 440 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-202ENST00000425518 KIF20BQ96Q89 1820 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms