RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 RGPD2P0DJD1 1756 aa21.37■■□□□ 1.01
HDAC11-210ENST00000425430 PNPLA7Q6ZV29 1317 aa21.36■■□□□ 1.01
HDAC11-210ENST00000425430 SHANK3Q9BYB0 1731 aa21.36■■□□□ 1.01
HDAC11-210ENST00000425430 KCNQ4P56696 695 aa21.36■■□□□ 1.01
HDAC11-210ENST00000425430 LY75O60449 1722 aa21.35■■□□□ 1.01
HDAC11-210ENST00000425430 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
HDAC11-210ENST00000425430 SLC16A10Q8TF71 515 aa21.35■■□□□ 1.01
HDAC11-210ENST00000425430 TFCP2L1Q9NZI6 479 aa21.35■■□□□ 1.01
HDAC11-210ENST00000425430 ANKRD36BQ8N2N9 1353 aa21.35■■□□□ 1.01
HDAC11-210ENST00000425430 MAP3K19Q56UN5 1328 aa21.34■■□□□ 1.01
HDAC11-210ENST00000425430 PRIM1P49642 420 aaKnown RBP21.34■■□□□ 1.01
HDAC11-210ENST00000425430 COG3Q96JB2 828 aa21.34■■□□□ 1.01
HDAC11-210ENST00000425430 PUS7Q96PZ0 661 aaKnown RBP21.34■■□□□ 1.01
HDAC11-210ENST00000425430 COL24A1Q17RW2 1714 aa21.34■■□□□ 1.01
HDAC11-210ENST00000425430 AMPHP49418 695 aa21.33■■□□□ 1.01
HDAC11-210ENST00000425430 MEGF6O75095 1541 aa21.33■■□□□ 1
HDAC11-210ENST00000425430 HOXC9P31274 260 aa21.32■■□□□ 1
HDAC11-210ENST00000425430 NSD2O96028 1365 aa21.32■■□□□ 1
HDAC11-210ENST00000425430 C1QTNF8P60827 252 aa21.31■■□□□ 1
HDAC11-210ENST00000425430 FBLN1P23142 703 aa21.3■■□□□ 1
HDAC11-210ENST00000425430 ZCRB1Q8TBF4 217 aaKnown RBP21.3■■□□□ 1
HDAC11-210ENST00000425430 GOLGB1Q14789 3259 aaKnown RBP21.29■■□□□ 1
HDAC11-210ENST00000425430 MSH5O43196 834 aa21.29■■□□□ 1
HDAC11-210ENST00000425430 NLGN2Q8NFZ4 835 aa21.29■■□□□ 1
HDAC11-210ENST00000425430 CCNL1Q9UK58 526 aaPredicted RBP21.29■■□□□ 1
HDAC11-210ENST00000425430 TMF1P82094 1093 aa21.28■■□□□ 1
HDAC11-210ENST00000425430 RTL1A6NKG5 1358 aa21.27■■□□□ 1
HDAC11-210ENST00000425430 USHBP1Q8N6Y0 703 aa21.26■□□□□ 0.99
HDAC11-210ENST00000425430 SMG6Q86US8 1419 aaKnown RBP21.26■□□□□ 0.99
HDAC11-210ENST00000425430 GIGYF1O75420 1035 aaPredicted RBP21.25■□□□□ 0.99
HDAC11-210ENST00000425430 RRS1Q15050 365 aaKnown RBP21.25■□□□□ 0.99
HDAC11-210ENST00000425430 C5P01031 1676 aa21.24■□□□□ 0.99
HDAC11-210ENST00000425430 MSL1Q68DK7 614 aa21.24■□□□□ 0.99
HDAC11-210ENST00000425430 RAPGEF4Q8WZA2 1011 aa21.23■□□□□ 0.99
HDAC11-210ENST00000425430 SLC24A1O60721 1099 aa21.22■□□□□ 0.99
HDAC11-210ENST00000425430 NBPF6Q5VWK0 638 aa21.22■□□□□ 0.99
HDAC11-210ENST00000425430 COL23A1Q86Y22 540 aaPredicted RBP21.22■□□□□ 0.99
HDAC11-210ENST00000425430 NBPF4Q96M43 638 aa21.22■□□□□ 0.99
HDAC11-210ENST00000425430 KIF20BQ96Q89 1820 aa21.21■□□□□ 0.99
HDAC11-210ENST00000425430 HSPA5P11021 654 aaKnown RBP21.21■□□□□ 0.99
HDAC11-210ENST00000425430 GGNBP2Q9H3C7 697 aa21.21■□□□□ 0.99
HDAC11-210ENST00000425430 CGNL1Q0VF96 1302 aa21.2■□□□□ 0.98
HDAC11-210ENST00000425430 YBX3P16989 372 aaKnown RBP eCLIP21.19■□□□□ 0.98
HDAC11-210ENST00000425430 TATP17735 454 aaPredicted RBP21.19■□□□□ 0.98
HDAC11-210ENST00000425430 PCDH11XQ9BZA7 1347 aa21.18■□□□□ 0.98
HDAC11-210ENST00000425430 PCDH11YQ9BZA8 1340 aa21.18■□□□□ 0.98
HDAC11-210ENST00000425430 TAF1LQ8IZX4 1826 aa21.18■□□□□ 0.98
HDAC11-210ENST00000425430 GRIN3BO60391 1043 aa21.17■□□□□ 0.98
HDAC11-210ENST00000425430 EIF4G2P78344 907 aaKnown RBP eCLIP21.17■□□□□ 0.98
HDAC11-210ENST00000425430 PALLDQ8WX93 1383 aa21.17■□□□□ 0.98
HDAC11-210ENST00000425430 TOGARAM1Q9Y4F4 1720 aa21.16■□□□□ 0.98
HDAC11-210ENST00000425430 FYB1O15117 783 aa21.16■□□□□ 0.98
HDAC11-210ENST00000425430 CARD14Q9BXL6 1004 aa21.16■□□□□ 0.98
HDAC11-210ENST00000425430 INSRP06213 1382 aa21.14■□□□□ 0.98
HDAC11-210ENST00000425430 FLT4P35916 1363 aa21.14■□□□□ 0.98
HDAC11-210ENST00000425430 CDCA8Q53HL2 280 aa21.14■□□□□ 0.97
HDAC11-210ENST00000425430 HSP90AB2PQ58FF8 381 aa21.14■□□□□ 0.97
HDAC11-210ENST00000425430 MPRIPQ6WCQ1 1025 aa21.14■□□□□ 0.97
HDAC11-210ENST00000425430 ITGB4P16144 1822 aa21.13■□□□□ 0.97
HDAC11-210ENST00000425430 C4BP0C0L5 1744 aa21.13■□□□□ 0.97
HDAC11-210ENST00000425430 ATP10DQ9P241 1426 aa21.12■□□□□ 0.97
HDAC11-210ENST00000425430 PKD1L3Q7Z443 1732 aa21.12■□□□□ 0.97
HDAC11-210ENST00000425430 FLAD1Q8NFF5 587 aa21.11■□□□□ 0.97
HDAC11-210ENST00000425430 AK7Q96M32 723 aa21.11■□□□□ 0.97
HDAC11-210ENST00000425430 POLR3GLQ9BT43 218 aa21.1■□□□□ 0.97
HDAC11-210ENST00000425430 CYP27B1O15528 508 aa21.09■□□□□ 0.97
HDAC11-210ENST00000425430 PHF14O94880 888 aa21.09■□□□□ 0.97
HDAC11-210ENST00000425430 CD2APQ9Y5K6 639 aa21.09■□□□□ 0.97
HDAC11-210ENST00000425430 NSD3Q9BZ95 1437 aa21.09■□□□□ 0.97
HDAC11-210ENST00000425430 KIF24Q5T7B8 1368 aa21.09■□□□□ 0.97
HDAC11-210ENST00000425430 HMGB2P26583 209 aaKnown RBP21.08■□□□□ 0.97
HDAC11-210ENST00000425430 UBR3Q6ZT12 1888 aa21.08■□□□□ 0.97
HDAC11-210ENST00000425430 SMARCC1Q92922 1105 aaPredicted RBP21.07■□□□□ 0.96
HDAC11-210ENST00000425430 EMILIN1Q9Y6C2 1016 aa21.07■□□□□ 0.96
HDAC11-210ENST00000425430 WWC3Q9ULE0 1092 aa21.06■□□□□ 0.96
HDAC11-210ENST00000425430 PPM1GO15355 546 aaPredicted RBP21.05■□□□□ 0.96
HDAC11-210ENST00000425430 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
HDAC11-210ENST00000425430 AMIGO3Q86WK7 504 aa21.05■□□□□ 0.96
HDAC11-210ENST00000425430 ZNF526Q8TF50 670 aaPredicted RBP21.05■□□□□ 0.96
HDAC11-210ENST00000425430 PIGBQ92521 554 aa21.04■□□□□ 0.96
HDAC11-210ENST00000425430 GPBP1L1Q9HC44 474 aaPredicted RBP21.04■□□□□ 0.96
HDAC11-210ENST00000425430 ANKRD26Q9UPS8 1709 aa21.04■□□□□ 0.96
HDAC11-210ENST00000425430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.03■□□□□ 0.96
HDAC11-210ENST00000425430 IGSF1Q8N6C5 1336 aa21.03■□□□□ 0.96
HDAC11-210ENST00000425430 MAP2P11137 1827 aaKnown RBP21.02■□□□□ 0.96
HDAC11-210ENST00000425430 ADCY9O60503 1353 aa21.02■□□□□ 0.96
HDAC11-210ENST00000425430 CEP350Q5VT06 3117 aa21.02■□□□□ 0.96
HDAC11-210ENST00000425430 NCAPD2Q15021 1401 aa21.02■□□□□ 0.96
HDAC11-210ENST00000425430 SPG7Q9UQ90 795 aa21.01■□□□□ 0.95
HDAC11-210ENST00000425430 LOC102724428A0A0B4J2F2 783 aa21■□□□□ 0.95
HDAC11-210ENST00000425430 SIK1P57059 783 aa21■□□□□ 0.95
HDAC11-210ENST00000425430 LINC00116Q8NCU8 138 aa21■□□□□ 0.95
HDAC11-210ENST00000425430 SSFA2P28290 1259 aa20.99■□□□□ 0.95
HDAC11-210ENST00000425430 PANK3Q9H999 370 aa20.99■□□□□ 0.95
HDAC11-210ENST00000425430 TMOD3Q9NYL9 352 aa20.99■□□□□ 0.95
HDAC11-210ENST00000425430 GNPATO15228 680 aa20.98■□□□□ 0.95
HDAC11-210ENST00000425430 KIF7Q2M1P5 1343 aa20.98■□□□□ 0.95
HDAC11-210ENST00000425430 NKX1-1Q15270 411 aaPredicted RBP20.97■□□□□ 0.95
HDAC11-210ENST00000425430 EYA1Q99502 592 aa20.96■□□□□ 0.95
HDAC11-210ENST00000425430 ASAP1Q9ULH1 1129 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms