RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
MDC1-205ENST00000425072 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
MDC1-205ENST00000425072 E9PSI1 815 aa13.49□□□□□ -0.25
MDC1-205ENST00000425072 MTHFSDQ2M296 383 aaKnown RBP13.49□□□□□ -0.25
MDC1-205ENST00000425072 USHBP1Q8N6Y0 703 aa13.49□□□□□ -0.25
MDC1-205ENST00000425072 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
MDC1-205ENST00000425072 PLEKHG2Q9H7P9 1386 aa13.48□□□□□ -0.25
MDC1-205ENST00000425072 ABCA3Q99758 1704 aa13.48□□□□□ -0.25
MDC1-205ENST00000425072 IL16Q14005 1332 aa13.48□□□□□ -0.25
MDC1-205ENST00000425072 ZNF521Q96K83 1311 aa13.48□□□□□ -0.25
MDC1-205ENST00000425072 GNAT3A8MTJ3 354 aa13.48□□□□□ -0.25
MDC1-205ENST00000425072 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
MDC1-205ENST00000425072 LARP1Q6PKG0 1096 aaKnown RBP13.48□□□□□ -0.25
MDC1-205ENST00000425072 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
MDC1-205ENST00000425072 FAM208AQ9UK61 1670 aaKnown RBP13.47□□□□□ -0.25
MDC1-205ENST00000425072 SLFN5Q08AF3 891 aa13.47□□□□□ -0.25
MDC1-205ENST00000425072 MEX3CQ5U5Q3 659 aaKnown RBP13.47□□□□□ -0.25
MDC1-205ENST00000425072 CDCA7Q9BWT1 371 aaPredicted RBP13.47□□□□□ -0.25
MDC1-205ENST00000425072 IL2RBP14784 551 aa13.46□□□□□ -0.25
MDC1-205ENST00000425072 AKAP4Q5JQC9 854 aa13.46□□□□□ -0.25
MDC1-205ENST00000425072 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
MDC1-205ENST00000425072 FNBP4Q8N3X1 1017 aaPredicted RBP13.46□□□□□ -0.25
MDC1-205ENST00000425072 MYH16Q9H6N6 1097 aa13.46□□□□□ -0.25
MDC1-205ENST00000425072 THRAP3Q9Y2W1 955 aaKnown RBP13.46□□□□□ -0.25
MDC1-205ENST00000425072 COL5A2P05997 1499 aaPredicted RBP13.46□□□□□ -0.25
MDC1-205ENST00000425072 NCAPD2Q15021 1401 aa13.46□□□□□ -0.26
MDC1-205ENST00000425072 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
MDC1-205ENST00000425072 LMO7Q8WWI1 1683 aa13.45□□□□□ -0.26
MDC1-205ENST00000425072 UNC5CLQ8IV45 518 aa13.45□□□□□ -0.26
MDC1-205ENST00000425072 TRMT2AQ8IZ69 625 aaKnown RBP13.45□□□□□ -0.26
MDC1-205ENST00000425072 C8orf37Q96NL8 207 aa13.45□□□□□ -0.26
MDC1-205ENST00000425072 CRB1P82279 1406 aa13.45□□□□□ -0.26
MDC1-205ENST00000425072 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
MDC1-205ENST00000425072 GNAI1P63096 354 aa13.44□□□□□ -0.26
MDC1-205ENST00000425072 ZNF530Q6P9A1 599 aaPredicted RBP13.44□□□□□ -0.26
MDC1-205ENST00000425072 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
MDC1-205ENST00000425072 ZCRB1Q8TBF4 217 aaKnown RBP13.44□□□□□ -0.26
MDC1-205ENST00000425072 CDCA7LQ96GN5 454 aa13.44□□□□□ -0.26
MDC1-205ENST00000425072 BABAM1Q9NWV8 329 aa13.43□□□□□ -0.26
MDC1-205ENST00000425072 EXOC5O00471 708 aa13.42□□□□□ -0.26
MDC1-205ENST00000425072 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
MDC1-205ENST00000425072 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
MDC1-205ENST00000425072 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
MDC1-205ENST00000425072 USP21Q9UK80 565 aa13.42□□□□□ -0.26
MDC1-205ENST00000425072 CCDC9Q9Y3X0 531 aaKnown RBP13.42□□□□□ -0.26
MDC1-205ENST00000425072 TAF7Q15545 349 aaPredicted RBP13.41□□□□□ -0.26
MDC1-205ENST00000425072 VPS72Q15906 364 aa13.41□□□□□ -0.26
MDC1-205ENST00000425072 DUSP27Q5VZP5 1158 aa13.41□□□□□ -0.26
MDC1-205ENST00000425072 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
MDC1-205ENST00000425072 SLIT2O94813 1529 aa13.4□□□□□ -0.26
MDC1-205ENST00000425072 NWD2Q9ULI1 1742 aa13.4□□□□□ -0.26
MDC1-205ENST00000425072 ZBTB22O15209 634 aa13.4□□□□□ -0.26
MDC1-205ENST00000425072 CT47B1P0C2W7 299 aaPredicted RBP13.4□□□□□ -0.26
MDC1-205ENST00000425072 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
MDC1-205ENST00000425072 MCM10Q7L590 875 aa13.4□□□□□ -0.26
MDC1-205ENST00000425072 LAS1LQ9Y4W2 734 aaKnown RBP13.4□□□□□ -0.26
MDC1-205ENST00000425072 MAP3K5Q99683 1374 aa13.4□□□□□ -0.26
MDC1-205ENST00000425072 SPATA31A1Q5TZJ5 1347 aa13.39□□□□□ -0.27
MDC1-205ENST00000425072 SPATA31A5Q5VU36 1347 aa13.39□□□□□ -0.27
MDC1-205ENST00000425072 SPATA31A7Q8IWB4 1347 aa13.39□□□□□ -0.27
MDC1-205ENST00000425072 ZNF853P0CG23 659 aa13.39□□□□□ -0.27
MDC1-205ENST00000425072 IL17REQ8NFR9 667 aa13.39□□□□□ -0.27
MDC1-205ENST00000425072 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
MDC1-205ENST00000425072 CHL1O00533 1208 aa13.38□□□□□ -0.27
MDC1-205ENST00000425072 PHKG2P15735 406 aa13.38□□□□□ -0.27
MDC1-205ENST00000425072 TEFQ10587 303 aa13.38□□□□□ -0.27
MDC1-205ENST00000425072 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
MDC1-205ENST00000425072 CHMP4AQ9BY43 222 aa13.38□□□□□ -0.27
MDC1-205ENST00000425072 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
MDC1-205ENST00000425072 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
MDC1-205ENST00000425072 PCDH11YQ9BZA8 1340 aa13.38□□□□□ -0.27
MDC1-205ENST00000425072 RNMTO43148 476 aaKnown RBP13.37□□□□□ -0.27
MDC1-205ENST00000425072 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
MDC1-205ENST00000425072 MPRIPQ6WCQ1 1025 aa13.37□□□□□ -0.27
MDC1-205ENST00000425072 THUMPD2Q9BTF0 503 aaKnown RBP13.37□□□□□ -0.27
MDC1-205ENST00000425072 LGR6Q9HBX8 967 aa13.37□□□□□ -0.27
MDC1-205ENST00000425072 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
MDC1-205ENST00000425072 DDX54Q8TDD1 881 aaKnown RBP13.36□□□□□ -0.27
MDC1-205ENST00000425072 ZNF428Q96B54 188 aa13.36□□□□□ -0.27
MDC1-205ENST00000425072 RCAN3Q9UKA8 241 aa13.36□□□□□ -0.27
MDC1-205ENST00000425072 OVOS2A0A0G2JMS6 1433 aa13.36□□□□□ -0.27
MDC1-205ENST00000425072 AFF2P51816 1311 aa13.36□□□□□ -0.27
MDC1-205ENST00000425072 BCL9LQ86UU0 1499 aa13.36□□□□□ -0.27
MDC1-205ENST00000425072 PLCH1Q4KWH8 1693 aa13.35□□□□□ -0.27
MDC1-205ENST00000425072 ERVV-2B6SEH9 535 aa13.35□□□□□ -0.27
MDC1-205ENST00000425072 CYP27B1O15528 508 aa13.35□□□□□ -0.27
MDC1-205ENST00000425072 DDB1Q16531 1140 aa13.35□□□□□ -0.27
MDC1-205ENST00000425072 ZNF772Q68DY9 489 aaPredicted RBP13.35□□□□□ -0.27
MDC1-205ENST00000425072 QTRT2Q9H974 415 aaKnown RBP13.35□□□□□ -0.27
MDC1-205ENST00000425072 GJD4Q96KN9 370 aaPredicted RBP13.34□□□□□ -0.27
MDC1-205ENST00000425072 MBIPQ9NS73 344 aa13.34□□□□□ -0.27
MDC1-205ENST00000425072 TSPYL4Q9UJ04 414 aa13.34□□□□□ -0.27
MDC1-205ENST00000425072 MEGF6O75095 1541 aa13.34□□□□□ -0.27
MDC1-205ENST00000425072 CEMIPQ8WUJ3 1361 aa13.33□□□□□ -0.27
MDC1-205ENST00000425072 PARP4Q9UKK3 1724 aaKnown RBP13.33□□□□□ -0.27
MDC1-205ENST00000425072 BTBD11A6QL63 1104 aa13.33□□□□□ -0.28
MDC1-205ENST00000425072 CABP4P57796 275 aa13.33□□□□□ -0.28
MDC1-205ENST00000425072 EXOSC9Q06265 439 aaKnown RBP13.33□□□□□ -0.28
MDC1-205ENST00000425072 TSR2Q969E8 191 aaKnown RBP13.33□□□□□ -0.28
MDC1-205ENST00000425072 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms