RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 AEBP1Q8IUX7 1158 aa27.57■■■□□ 2
PMS1-211ENST00000424766 TNS2Q63HR2 1409 aa27.57■■■□□ 2
PMS1-211ENST00000424766 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.56■■■□□ 23e-7■■□□□ 13.4
PMS1-211ENST00000424766 HMOX1P09601 288 aa27.55■■■□□ 2
PMS1-211ENST00000424766 U2AF1L5P0DN76 240 aaPredicted RBP27.54■■■□□ 2
PMS1-211ENST00000424766 U2AF1Q01081 240 aaKnown RBP eCLIP27.54■■■□□ 2
PMS1-211ENST00000424766 DIEXFQ68CQ4 756 aaKnown RBP27.54■■■□□ 2
PMS1-211ENST00000424766 PKD1L3Q7Z443 1732 aa27.53■■■□□ 2
PMS1-211ENST00000424766 SPG7Q9UQ90 795 aa27.53■■■□□ 2
PMS1-211ENST00000424766 MARCH10Q8NA82 808 aaPredicted RBP27.52■■■□□ 2
PMS1-211ENST00000424766 SHANK3Q9BYB0 1731 aa27.51■■□□□ 1.99
PMS1-211ENST00000424766 FCHSD2O94868 740 aa27.51■■□□□ 1.99
PMS1-211ENST00000424766 AMOTQ4VCS5 1084 aa27.51■■□□□ 1.99
PMS1-211ENST00000424766 PLEKHO1Q53GL0 409 aaPredicted RBP27.51■■□□□ 1.99
PMS1-211ENST00000424766 FAM196AQ6ZSG2 479 aa27.5■■□□□ 1.99
PMS1-211ENST00000424766 DDX54Q8TDD1 881 aaKnown RBP27.5■■□□□ 1.99
PMS1-211ENST00000424766 PCDH11XQ9BZA7 1347 aa27.48■■□□□ 1.99
PMS1-211ENST00000424766 PCDH11YQ9BZA8 1340 aa27.48■■□□□ 1.99
PMS1-211ENST00000424766 FAM182BQ5T319 152 aa27.48■■□□□ 1.99
PMS1-211ENST00000424766 RSPH6AQ9H0K4 717 aa27.48■■□□□ 1.99
PMS1-211ENST00000424766 CCDC184Q52MB2 194 aa27.46■■□□□ 1.99
PMS1-211ENST00000424766 BCL9O00512 1426 aa27.46■■□□□ 1.99
PMS1-211ENST00000424766 PNNQ9H307 717 aaKnown RBP27.45■■□□□ 1.98
PMS1-211ENST00000424766 CYP27B1O15528 508 aa27.44■■□□□ 1.98
PMS1-211ENST00000424766 PRKAR2BP31323 418 aa27.44■■□□□ 1.98
PMS1-211ENST00000424766 WDR43Q15061 677 aaKnown RBP eCLIP27.44■■□□□ 1.98
PMS1-211ENST00000424766 KAT6BQ8WYB5 2073 aa27.44■■□□□ 1.98
PMS1-211ENST00000424766 SBF2Q86WG5 1849 aa27.44■■□□□ 1.98
PMS1-211ENST00000424766 IFNL2Q8IZJ0 200 aa27.43■■□□□ 1.98
PMS1-211ENST00000424766 MRS2Q9HD23 443 aa27.43■■□□□ 1.98
PMS1-211ENST00000424766 NKX1-1Q15270 411 aaPredicted RBP27.41■■□□□ 1.98
PMS1-211ENST00000424766 PHKG2P15735 406 aa27.4■■□□□ 1.98
PMS1-211ENST00000424766 ZNF530Q6P9A1 599 aaPredicted RBP27.4■■□□□ 1.98
PMS1-211ENST00000424766 ADAMTS8Q9UP79 889 aa27.39■■□□□ 1.98
PMS1-211ENST00000424766 NEFMP07197 916 aa27.38■■□□□ 1.97
PMS1-211ENST00000424766 MTHFSDQ2M296 383 aaKnown RBP27.38■■□□□ 1.97
PMS1-211ENST00000424766 CCDC125Q86Z20 511 aa27.38■■□□□ 1.97
PMS1-211ENST00000424766 PHACTR3Q96KR7 559 aa27.38■■□□□ 1.97
PMS1-211ENST00000424766 PLEKHF1Q96S99 279 aa27.38■■□□□ 1.97
PMS1-211ENST00000424766 HSP90AB1P08238 724 aaKnown RBP27.37■■□□□ 1.97
PMS1-211ENST00000424766 C1orf141Q5JVX7 400 aa27.37■■□□□ 1.97
PMS1-211ENST00000424766 GAS2L2Q8NHY3 880 aa27.37■■□□□ 1.97
PMS1-211ENST00000424766 PNISRQ8TF01 805 aaKnown RBP27.37■■□□□ 1.97
PMS1-211ENST00000424766 AKAP4Q5JQC9 854 aa27.36■■□□□ 1.97
PMS1-211ENST00000424766 UPF1Q92900 1129 aaKnown RBP eCLIP27.36■■□□□ 1.97
PMS1-211ENST00000424766 CCER2I3L3R5 266 aa27.35■■□□□ 1.97
PMS1-211ENST00000424766 TRIM37O94972 964 aa27.34■■□□□ 1.97
PMS1-211ENST00000424766 SOCS7O14512 581 aa27.33■■□□□ 1.97
PMS1-211ENST00000424766 DCAF5Q96JK2 942 aa27.33■■□□□ 1.97
PMS1-211ENST00000424766 BCL11BQ9C0K0 894 aaPredicted RBP27.32■■□□□ 1.96
PMS1-211ENST00000424766 MIER1Q8N108 512 aa27.31■■□□□ 1.96
PMS1-211ENST00000424766 ACSBG1Q96GR2 724 aa27.31■■□□□ 1.96
PMS1-211ENST00000424766 MAPK8IP3Q9UPT6 1336 aa27.31■■□□□ 1.96
PMS1-211ENST00000424766 NHSQ6T4R5 1651 aa27.3■■□□□ 1.96
PMS1-211ENST00000424766 DOT1LQ8TEK3 1739 aa27.3■■□□□ 1.96
PMS1-211ENST00000424766 RUNDC1Q96C34 613 aa27.3■■□□□ 1.96
PMS1-211ENST00000424766 ITGB4P16144 1822 aa27.3■■□□□ 1.96
PMS1-211ENST00000424766 VIRMAQ69YN4 1812 aaKnown RBP27.3■■□□□ 1.96
PMS1-211ENST00000424766 KCNQ2O43526 872 aa27.29■■□□□ 1.96
PMS1-211ENST00000424766 PRIM1P49642 420 aaKnown RBP27.29■■□□□ 1.96
PMS1-211ENST00000424766 SF3B2Q13435 895 aaKnown RBP27.29■■□□□ 1.96
PMS1-211ENST00000424766 SCN11AQ9UI33 1791 aa27.29■■□□□ 1.96
PMS1-211ENST00000424766 GNAT3A8MTJ3 354 aa27.28■■□□□ 1.96
PMS1-211ENST00000424766 EP400Q96L91 3159 aa27.27■■□□□ 1.96
PMS1-211ENST00000424766 ERVV-2B6SEH9 535 aa27.27■■□□□ 1.96
PMS1-211ENST00000424766 MPRIPQ6WCQ1 1025 aa27.27■■□□□ 1.96
PMS1-211ENST00000424766 DLG5Q8TDM6 1919 aa27.27■■□□□ 1.96
PMS1-211ENST00000424766 TNS1Q9HBL0 1735 aaKnown RBP27.27■■□□□ 1.96
PMS1-211ENST00000424766 TOGARAM1Q9Y4F4 1720 aa27.27■■□□□ 1.96
PMS1-211ENST00000424766 MAP3K5Q99683 1374 aa27.26■■□□□ 1.95
PMS1-211ENST00000424766 NFE2L2Q16236 605 aa27.26■■□□□ 1.95
PMS1-211ENST00000424766 CCDC146Q8IYE0 955 aa27.26■■□□□ 1.95
PMS1-211ENST00000424766 HTATSF1O43719 755 aaKnown RBP27.25■■□□□ 1.95
PMS1-211ENST00000424766 PTF1AQ7RTS3 328 aa27.25■■□□□ 1.95
PMS1-211ENST00000424766 SYTL4Q96C24 671 aaPredicted RBP27.25■■□□□ 1.95
PMS1-211ENST00000424766 KDM6AO15550 1401 aaPredicted RBP27.24■■□□□ 1.95
PMS1-211ENST00000424766 RNMTO43148 476 aaKnown RBP27.24■■□□□ 1.95
PMS1-211ENST00000424766 ADAMTS7Q9UKP4 1686 aa27.24■■□□□ 1.95
PMS1-211ENST00000424766 BTAF1O14981 1849 aa27.23■■□□□ 1.95
PMS1-211ENST00000424766 APBA3O96018 575 aa27.23■■□□□ 1.95
PMS1-211ENST00000424766 LGR6Q9HBX8 967 aa27.23■■□□□ 1.95
PMS1-211ENST00000424766 TMPOP42166 694 aaKnown RBP27.21■■□□□ 1.95
PMS1-211ENST00000424766 BAG6P46379 1132 aa27.21■■□□□ 1.95
PMS1-211ENST00000424766 FAM9BQ8IZU0 186 aa27.21■■□□□ 1.95
PMS1-211ENST00000424766 CABP4P57796 275 aa27.2■■□□□ 1.94
PMS1-211ENST00000424766 IL17REQ8NFR9 667 aa27.2■■□□□ 1.94
PMS1-211ENST00000424766 RTF1Q92541 710 aaKnown RBP27.2■■□□□ 1.94
PMS1-211ENST00000424766 TMOD3Q9NYL9 352 aa27.2■■□□□ 1.94
PMS1-211ENST00000424766 PLSCR1O15162 318 aa27.19■■□□□ 1.94
PMS1-211ENST00000424766 PIGBQ92521 554 aa27.19■■□□□ 1.94
PMS1-211ENST00000424766 RIPK4P57078 832 aa27.18■■□□□ 1.94
PMS1-211ENST00000424766 SLC52A2Q9HAB3 445 aa27.17■■□□□ 1.94
PMS1-211ENST00000424766 APAF1O14727 1248 aa27.16■■□□□ 1.94
PMS1-211ENST00000424766 NFATC2IPQ8NCF5 419 aa27.16■■□□□ 1.94
PMS1-211ENST00000424766 CEMIPQ8WUJ3 1361 aa27.16■■□□□ 1.94
PMS1-211ENST00000424766 RGPD3A6NKT7 1758 aaPredicted RBP27.14■■□□□ 1.94
PMS1-211ENST00000424766 RGPD4Q7Z3J3 1758 aa27.14■■□□□ 1.94
PMS1-211ENST00000424766 LMOD3Q0VAK6 560 aa27.14■■□□□ 1.94
PMS1-211ENST00000424766 DEFB132Q7Z7B7 95 aa27.14■■□□□ 1.94
PMS1-211ENST00000424766 CAMKK2Q96RR4 588 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms