RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 EIF3CLB5ME19 914 aaKnown RBP8.15□□□□□ -1.1
CNOT4-205ENST00000423368 PSMD2Q13200 908 aa8.15□□□□□ -1.1
CNOT4-205ENST00000423368 GNL2Q13823 731 aaKnown RBP8.15□□□□□ -1.1
CNOT4-205ENST00000423368 PLEKHO1Q53GL0 409 aaPredicted RBP8.15□□□□□ -1.1
CNOT4-205ENST00000423368 PABPN1Q86U42 306 aaKnown RBP eCLIP8.15□□□□□ -1.1
CNOT4-205ENST00000423368 MORC1Q86VD1 984 aa8.15□□□□□ -1.1
CNOT4-205ENST00000423368 CCAR2Q8N163 923 aaKnown RBP8.15□□□□□ -1.1
CNOT4-205ENST00000423368 PSMD1Q99460 953 aa8.15□□□□□ -1.1
CNOT4-205ENST00000423368 EIF3CQ99613 913 aaKnown RBP8.15□□□□□ -1.1
CNOT4-205ENST00000423368 KIF2CQ99661 725 aa8.15□□□□□ -1.1
CNOT4-205ENST00000423368 CGNL1Q0VF96 1302 aa8.15□□□□□ -1.1
CNOT4-205ENST00000423368 BRD4O60885 1362 aaPredicted RBP8.15□□□□□ -1.1
CNOT4-205ENST00000423368 PNMA6AP0CW24 399 aaPredicted RBP8.15□□□□□ -1.11
CNOT4-205ENST00000423368 OAS2P29728 719 aaKnown RBP8.15□□□□□ -1.11
CNOT4-205ENST00000423368 PLA2G4AP47712 749 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 LIG3P49916 1009 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 NUBP1P53384 320 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 ARID5BQ14865 1188 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 ARHGAP29Q52LW3 1261 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 RYDENQ9NUL5 291 aaKnown RBP8.14□□□□□ -1.11
CNOT4-205ENST00000423368 USP47Q96K76 1375 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 KIF15Q9NS87 1388 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 CLCN6P51797 869 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 NUCB2P80303 420 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 CCDC18Q5T9S5 1454 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 MFSD4BQ5TF39 518 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 GIMAP7Q8NHV1 300 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 MPHOSPH9Q99550 1183 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 HTATSF1O43719 755 aaKnown RBP8.14□□□□□ -1.11
CNOT4-205ENST00000423368 CCDC27Q2M243 656 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 MCTP2Q6DN12 878 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 FAM184AQ8NB25 1140 aa8.14□□□□□ -1.11
CNOT4-205ENST00000423368 ARHGEF1Q92888 912 aaKnown RBP8.14□□□□□ -1.11
CNOT4-205ENST00000423368 AP1G2O75843 785 aa8.13□□□□□ -1.11
CNOT4-205ENST00000423368 SNX1Q13596 522 aa8.13□□□□□ -1.11
CNOT4-205ENST00000423368 CAMK4Q16566 473 aa8.13□□□□□ -1.11
CNOT4-205ENST00000423368 FBXW10Q5XX13 1052 aa8.13□□□□□ -1.11
CNOT4-205ENST00000423368 LEKR1Q6ZMV7 388 aa8.13□□□□□ -1.11
CNOT4-205ENST00000423368 FAM177A1Q8N128 213 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-205ENST00000423368 FBXW7Q969H0 707 aa8.13□□□□□ -1.11
CNOT4-205ENST00000423368 PPP1R12AO14974 1030 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-205ENST00000423368 EIF2S2P20042 333 aaKnown RBP8.13□□□□□ -1.11
CNOT4-205ENST00000423368 ANAPC15P60006 121 aa8.13□□□□□ -1.11
CNOT4-205ENST00000423368 MAP9Q49MG5 647 aa8.13□□□□□ -1.11
CNOT4-205ENST00000423368 ITPRIPQ8IWB1 547 aa8.13□□□□□ -1.11
CNOT4-205ENST00000423368 TRIM5Q9C035 493 aa8.13□□□□□ -1.11
CNOT4-205ENST00000423368 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.13□□□□□ -1.11
CNOT4-205ENST00000423368 IBTKQ9P2D0 1353 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-205ENST00000423368 KDM4AO75164 1064 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 FILIP1Q7Z7B0 1213 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 MNS1Q8NEH6 495 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 MED4Q9NPJ6 270 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 ATG3Q9NT62 314 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 ZDHHC9Q9Y397 364 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 FHOD1Q9Y613 1164 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 RTEL1-TNFRSF6BF6WH68 1400 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 MCM2P49736 904 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 TPM4P67936 248 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 CPSF2Q9P2I0 782 aaKnown RBP8.12□□□□□ -1.11
CNOT4-205ENST00000423368 FIBPO43427 364 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 ECEL1O95672 775 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 TMCO3Q6UWJ1 677 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 SNX21Q969T3 373 aa8.12□□□□□ -1.11
CNOT4-205ENST00000423368 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
CNOT4-205ENST00000423368 SLFN5Q08AF3 891 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 BARGINQ6ZT62 677 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 LUZP1Q86V48 1076 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 KIF1BPQ96EK5 621 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 SGIP1Q9BQI5 828 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 LARP6Q9BRS8 491 aaKnown RBP8.11□□□□□ -1.11
CNOT4-205ENST00000423368 CENPHQ9H3R5 247 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 VPS18Q9P253 973 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 NAP1L1P55209 391 aaKnown RBP8.11□□□□□ -1.11
CNOT4-205ENST00000423368 PTPN14Q15678 1187 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 ANKRD45Q5TZF3 282 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 ARL10Q8N8L6 244 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 SYAP1Q96A49 352 aaPredicted RBP8.11□□□□□ -1.11
CNOT4-205ENST00000423368 ZSWIM4Q9H7M6 989 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 TERF2IPQ9NYB0 399 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 SCRIBQ14160 1630 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 MAGEA9P43362 315 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 MCM6Q14566 821 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 AK7Q96M32 723 aa8.11□□□□□ -1.11
CNOT4-205ENST00000423368 KAT6BQ8WYB5 2073 aa8.1□□□□□ -1.11
CNOT4-205ENST00000423368 KIF1CO43896 1103 aaKnown RBP8.1□□□□□ -1.11
CNOT4-205ENST00000423368 TPM1P09493 284 aa8.1□□□□□ -1.11
CNOT4-205ENST00000423368 CASTP20810 708 aaKnown RBP8.1□□□□□ -1.11
CNOT4-205ENST00000423368 FBXO18Q8NFZ0 1043 aa8.1□□□□□ -1.11
CNOT4-205ENST00000423368 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
CNOT4-205ENST00000423368 ADAM21Q9UKJ8 722 aa8.1□□□□□ -1.11
CNOT4-205ENST00000423368 ROCK2O75116 1388 aaKnown RBP8.1□□□□□ -1.11
CNOT4-205ENST00000423368 MROH2BQ7Z745 1585 aa8.1□□□□□ -1.11
CNOT4-205ENST00000423368 SMC2O95347 1197 aa8.1□□□□□ -1.11
CNOT4-205ENST00000423368 CPLX2Q6PUV4 134 aaKnown RBP8.1□□□□□ -1.11
CNOT4-205ENST00000423368 DNAJC14Q6Y2X3 702 aaPredicted RBP8.1□□□□□ -1.11
CNOT4-205ENST00000423368 GBP6Q6ZN66 633 aa8.1□□□□□ -1.11
CNOT4-205ENST00000423368 USP48Q86UV5 1035 aa8.1□□□□□ -1.11
CNOT4-205ENST00000423368 CEP120Q8N960 986 aa8.1□□□□□ -1.11
CNOT4-205ENST00000423368 N4BP2L2Q92802 583 aaPredicted RBP8.1□□□□□ -1.11
CNOT4-205ENST00000423368 SMC1AQ14683 1233 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms