RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 EIF4A2Q14240 407 aaKnown RBP35.97■■■■□ 3.35
CDK9-202ENST00000421939 CC2D1BQ5T0F9 858 aaKnown RBP35.97■■■■□ 3.35
CDK9-202ENST00000421939 PTF1AQ7RTS3 328 aa35.97■■■■□ 3.35
CDK9-202ENST00000421939 RREB1Q92766 1687 aa35.97■■■■□ 3.35
CDK9-202ENST00000421939 RGPD3A6NKT7 1758 aaPredicted RBP35.97■■■■□ 3.35
CDK9-202ENST00000421939 RGPD4Q7Z3J3 1758 aa35.97■■■■□ 3.35
CDK9-202ENST00000421939 EYA1Q99502 592 aa35.95■■■■□ 3.35
CDK9-202ENST00000421939 ACSBG1Q96GR2 724 aa35.92■■■■□ 3.34
CDK9-202ENST00000421939 KCNQ2O43526 872 aa35.9■■■■□ 3.34
CDK9-202ENST00000421939 NUP188Q5SRE5 1749 aa35.89■■■■□ 3.34
CDK9-202ENST00000421939 PKD1L3Q7Z443 1732 aa35.89■■■■□ 3.34
CDK9-202ENST00000421939 PLSCR1O15162 318 aa35.88■■■■□ 3.33
CDK9-202ENST00000421939 IGSF1Q8N6C5 1336 aa35.87■■■■□ 3.33
CDK9-202ENST00000421939 PCDH11XQ9BZA7 1347 aa35.86■■■■□ 3.33
CDK9-202ENST00000421939 PCDH11YQ9BZA8 1340 aa35.86■■■■□ 3.33
CDK9-202ENST00000421939 DOT1LQ8TEK3 1739 aa35.86■■■■□ 3.33
CDK9-202ENST00000421939 CNGB1Q14028 1251 aaPredicted RBP35.85■■■■□ 3.33
CDK9-202ENST00000421939 BTAF1O14981 1849 aa35.84■■■■□ 3.33
CDK9-202ENST00000421939 MTHFSP49914 203 aa35.83■■■■□ 3.33
CDK9-202ENST00000421939 KAT6BQ8WYB5 2073 aa35.82■■■■□ 3.33
CDK9-202ENST00000421939 PLEKHG2Q9H7P9 1386 aa35.8■■■■□ 3.32
CDK9-202ENST00000421939 SPG7Q9UQ90 795 aa35.78■■■■□ 3.32
CDK9-202ENST00000421939 PSDA5PKW4 1024 aaPredicted RBP35.77■■■■□ 3.32
CDK9-202ENST00000421939 CYP27B1O15528 508 aa35.77■■■■□ 3.32
CDK9-202ENST00000421939 IL13P35225 146 aa35.77■■■■□ 3.32
CDK9-202ENST00000421939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.77■■■■□ 3.32
CDK9-202ENST00000421939 SRCAPQ6ZRS2 3230 aa35.76■■■■□ 3.32
CDK9-202ENST00000421939 PRIM1P49642 420 aaKnown RBP35.75■■■■□ 3.31
CDK9-202ENST00000421939 SYTL4Q96C24 671 aaPredicted RBP35.75■■■■□ 3.31
CDK9-202ENST00000421939 R3HDM1Q15032 1099 aaKnown RBP35.74■■■■□ 3.31
CDK9-202ENST00000421939 ZEB1P37275 1124 aaPredicted RBP35.73■■■■□ 3.31
CDK9-202ENST00000421939 NBPF14Q5TI25 921 aa35.73■■■■□ 3.31
CDK9-202ENST00000421939 PROM2Q8N271 834 aa35.73■■■■□ 3.31
CDK9-202ENST00000421939 TXNRD1Q16881 649 aa35.72■■■■□ 3.31
CDK9-202ENST00000421939 AEBP1Q8IUX7 1158 aa35.71■■■■□ 3.31
CDK9-202ENST00000421939 KDRP35968 1356 aa35.7■■■■□ 3.31
CDK9-202ENST00000421939 TOGARAM1Q9Y4F4 1720 aa35.7■■■■□ 3.31
CDK9-202ENST00000421939 COL3A1P02461 1466 aaPredicted RBP35.69■■■■□ 3.3
CDK9-202ENST00000421939 SULT6B1Q6IMI4 303 aa35.68■■■■□ 3.3
CDK9-202ENST00000421939 DIAPH1O60610 1272 aaKnown RBP35.66■■■■□ 3.3
CDK9-202ENST00000421939 NKX1-1Q15270 411 aaPredicted RBP35.66■■■■□ 3.3
CDK9-202ENST00000421939 PHKG2P15735 406 aa35.65■■■■□ 3.3
CDK9-202ENST00000421939 ANO8Q9HCE9 1232 aaPredicted RBP35.65■■■■□ 3.3
CDK9-202ENST00000421939 IFNL2Q8IZJ0 200 aa35.64■■■■□ 3.3
CDK9-202ENST00000421939 PLEKHO1Q53GL0 409 aaPredicted RBP35.62■■■■□ 3.29
CDK9-202ENST00000421939 AMOTQ4VCS5 1084 aa35.61■■■■□ 3.29
CDK9-202ENST00000421939 PAPPAQ13219 1627 aa35.61■■■■□ 3.29
CDK9-202ENST00000421939 LY75O60449 1722 aa35.6■■■■□ 3.29
CDK9-202ENST00000421939 ITGB4P16144 1822 aa35.6■■■■□ 3.29
CDK9-202ENST00000421939 PPP2R1AP30153 589 aa35.59■■■■□ 3.29
CDK9-202ENST00000421939 ZNF530Q6P9A1 599 aaPredicted RBP35.58■■■■□ 3.29
CDK9-202ENST00000421939 LRP5O75197 1615 aa35.57■■■■□ 3.29
CDK9-202ENST00000421939 CFAP53Q96M91 514 aa35.57■■■■□ 3.28
CDK9-202ENST00000421939 HMOX1P09601 288 aa35.56■■■■□ 3.28
CDK9-202ENST00000421939 SLC27A3Q5K4L6 730 aa35.56■■■■□ 3.28
CDK9-202ENST00000421939 MPRIPQ6WCQ1 1025 aa35.56■■■■□ 3.28
CDK9-202ENST00000421939 LRRC4BQ9NT99 713 aa35.55■■■■□ 3.28
CDK9-202ENST00000421939 STK32BQ9NY57 414 aa35.55■■■■□ 3.28
CDK9-202ENST00000421939 HSP90AB1P08238 724 aaKnown RBP35.53■■■■□ 3.28
CDK9-202ENST00000421939 DDX10Q13206 875 aaKnown RBP35.52■■■■□ 3.28
CDK9-202ENST00000421939 U2SURPO15042 1029 aaKnown RBP35.51■■■■□ 3.28
CDK9-202ENST00000421939 PALLDQ8WX93 1383 aa35.51■■■■□ 3.27
CDK9-202ENST00000421939 SLC15A2Q16348 729 aa35.5■■■■□ 3.27
CDK9-202ENST00000421939 C1orf141Q5JVX7 400 aa35.5■■■■□ 3.27
CDK9-202ENST00000421939 PIGBQ92521 554 aa35.5■■■■□ 3.27
CDK9-202ENST00000421939 TMOD3Q9NYL9 352 aa35.5■■■■□ 3.27
CDK9-202ENST00000421939 KDM6AO15550 1401 aaPredicted RBP35.49■■■■□ 3.27
CDK9-202ENST00000421939 DCAF5Q96JK2 942 aa35.49■■■■□ 3.27
CDK9-202ENST00000421939 CCNL1Q9UK58 526 aaPredicted RBP35.48■■■■□ 3.27
CDK9-202ENST00000421939 CASZ1Q86V15 1759 aa35.48■■■■□ 3.27
CDK9-202ENST00000421939 KCNQ4P56696 695 aa35.46■■■■□ 3.27
CDK9-202ENST00000421939 SMARCC1Q92922 1105 aaPredicted RBP35.46■■■■□ 3.27
CDK9-202ENST00000421939 ZNF827Q17R98 1081 aa35.44■■■■□ 3.26
CDK9-202ENST00000421939 ERVV-2B6SEH9 535 aa35.43■■■■□ 3.26
CDK9-202ENST00000421939 NUDCQ9Y266 331 aa35.43■■■■□ 3.26
CDK9-202ENST00000421939 AKAP4Q5JQC9 854 aa35.41■■■■□ 3.26
CDK9-202ENST00000421939 AKT1S1Q96B36 256 aa35.4■■■■□ 3.26
CDK9-202ENST00000421939 C5P01031 1676 aa35.39■■■■□ 3.26
CDK9-202ENST00000421939 SCN11AQ9UI33 1791 aa35.38■■■■□ 3.25
CDK9-202ENST00000421939 MTHFSDQ2M296 383 aaKnown RBP35.38■■■■□ 3.25
CDK9-202ENST00000421939 PDGFDQ9GZP0 370 aaPredicted RBP35.38■■■■□ 3.25
CDK9-202ENST00000421939 CABP4P57796 275 aa35.37■■■■□ 3.25
CDK9-202ENST00000421939 RALBP1Q15311 655 aa35.37■■■■□ 3.25
CDK9-202ENST00000421939 ASAP1Q9ULH1 1129 aa35.37■■■■□ 3.25
CDK9-202ENST00000421939 QSER1Q2KHR3 1735 aa35.36■■■■□ 3.25
CDK9-202ENST00000421939 TAF1LQ8IZX4 1826 aa35.34■■■■□ 3.25
CDK9-202ENST00000421939 U2AF1L5P0DN76 240 aaPredicted RBP35.34■■■■□ 3.25
CDK9-202ENST00000421939 U2AF1Q01081 240 aaKnown RBP eCLIP35.34■■■■□ 3.25
CDK9-202ENST00000421939 RSPH6AQ9H0K4 717 aa35.34■■■■□ 3.25
CDK9-202ENST00000421939 ATG3Q9NT62 314 aa35.34■■■■□ 3.25
CDK9-202ENST00000421939 TUBGCP6Q96RT7 1819 aa35.34■■■■□ 3.25
CDK9-202ENST00000421939 SPON1Q9HCB6 807 aa35.33■■■■□ 3.25
CDK9-202ENST00000421939 LOC102724428A0A0B4J2F2 783 aa35.32■■■■□ 3.24
CDK9-202ENST00000421939 HMGB2P26583 209 aaKnown RBP35.32■■■■□ 3.24
CDK9-202ENST00000421939 PRKAR2BP31323 418 aa35.32■■■■□ 3.24
CDK9-202ENST00000421939 SIK1P57059 783 aa35.32■■■■□ 3.24
CDK9-202ENST00000421939 ADAMTS7Q9UKP4 1686 aa35.31■■■■□ 3.24
CDK9-202ENST00000421939 MRC1P22897 1456 aa35.3■■■■□ 3.24
CDK9-202ENST00000421939 ZBTB7AO95365 584 aa35.3■■■■□ 3.24
CDK9-202ENST00000421939 GAS2L2Q8NHY3 880 aa35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms