RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 PTF1AQ7RTS3 328 aa29.09■■■□□ 2.25
FNDC3B-204ENST00000421757 KCNQ2O43526 872 aa29.07■■■□□ 2.24
FNDC3B-204ENST00000421757 NPC1L1Q9UHC9 1359 aa29.07■■■□□ 2.24
FNDC3B-204ENST00000421757 PARD3Q8TEW0 1356 aa29.06■■■□□ 2.24
FNDC3B-204ENST00000421757 ZEB1P37275 1124 aaPredicted RBP29.04■■■□□ 2.24
FNDC3B-204ENST00000421757 MTHFSP49914 203 aa29.04■■■□□ 2.24
FNDC3B-204ENST00000421757 NCAPD2Q15021 1401 aa29.03■■■□□ 2.24
FNDC3B-204ENST00000421757 PLSCR1O15162 318 aa29.02■■■□□ 2.24
FNDC3B-204ENST00000421757 PCDH11XQ9BZA7 1347 aa29.01■■■□□ 2.23
FNDC3B-204ENST00000421757 PCDH11YQ9BZA8 1340 aa29.01■■■□□ 2.23
FNDC3B-204ENST00000421757 SYTL4Q96C24 671 aaPredicted RBP29■■■□□ 2.23
FNDC3B-204ENST00000421757 NHSQ6T4R5 1651 aa28.99■■■□□ 2.23
FNDC3B-204ENST00000421757 IGSF1Q8N6C5 1336 aa28.99■■■□□ 2.23
FNDC3B-204ENST00000421757 SPG7Q9UQ90 795 aa28.99■■■□□ 2.23
FNDC3B-204ENST00000421757 SHANK3Q9BYB0 1731 aa28.98■■■□□ 2.23
FNDC3B-204ENST00000421757 PSDA5PKW4 1024 aaPredicted RBP28.96■■■□□ 2.23
FNDC3B-204ENST00000421757 PRIM1P49642 420 aaKnown RBP28.96■■■□□ 2.23
FNDC3B-204ENST00000421757 KAT6BQ8WYB5 2073 aa28.96■■■□□ 2.23
FNDC3B-204ENST00000421757 IL13P35225 146 aa28.95■■■□□ 2.22
FNDC3B-204ENST00000421757 CYP27B1O15528 508 aa28.94■■■□□ 2.22
FNDC3B-204ENST00000421757 NBPF14Q5TI25 921 aa28.94■■■□□ 2.22
FNDC3B-204ENST00000421757 RREB1Q92766 1687 aa28.93■■■□□ 2.22
FNDC3B-204ENST00000421757 R3HDM1Q15032 1099 aaKnown RBP28.93■■■□□ 2.22
FNDC3B-204ENST00000421757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.93■■■□□ 2.222e-35■□□□□ 8.8
FNDC3B-204ENST00000421757 SULT6B1Q6IMI4 303 aa28.92■■■□□ 2.22
FNDC3B-204ENST00000421757 RGPD3A6NKT7 1758 aaPredicted RBP28.91■■■□□ 2.22
FNDC3B-204ENST00000421757 RGPD4Q7Z3J3 1758 aa28.91■■■□□ 2.22
FNDC3B-204ENST00000421757 DIAPH1O60610 1272 aaKnown RBP28.91■■■□□ 2.22
FNDC3B-204ENST00000421757 TXNRD1Q16881 649 aa28.91■■■□□ 2.22
FNDC3B-204ENST00000421757 AEBP1Q8IUX7 1158 aa28.91■■■□□ 2.22
FNDC3B-204ENST00000421757 PKD1L3Q7Z443 1732 aa28.91■■■□□ 2.22
FNDC3B-204ENST00000421757 DOT1LQ8TEK3 1739 aa28.91■■■□□ 2.22
FNDC3B-204ENST00000421757 PROM2Q8N271 834 aa28.9■■■□□ 2.22
FNDC3B-204ENST00000421757 NUP188Q5SRE5 1749 aa28.89■■■□□ 2.22
FNDC3B-204ENST00000421757 BTAF1O14981 1849 aa28.89■■■□□ 2.22
FNDC3B-204ENST00000421757 PLEKHO1Q53GL0 409 aaPredicted RBP28.88■■■□□ 2.21
FNDC3B-204ENST00000421757 IFNL2Q8IZJ0 200 aa28.88■■■□□ 2.21
FNDC3B-204ENST00000421757 DDX10Q13206 875 aaKnown RBP28.87■■■□□ 2.21
FNDC3B-204ENST00000421757 PHKG2P15735 406 aa28.85■■■□□ 2.21
FNDC3B-204ENST00000421757 CFAP53Q96M91 514 aa28.85■■■□□ 2.21
FNDC3B-204ENST00000421757 PLEKHG2Q9H7P9 1386 aa28.85■■■□□ 2.21
FNDC3B-204ENST00000421757 HMOX1P09601 288 aa28.84■■■□□ 2.21
FNDC3B-204ENST00000421757 PPP2R1AP30153 589 aa28.84■■■□□ 2.21
FNDC3B-204ENST00000421757 NKX1-1Q15270 411 aaPredicted RBP28.84■■■□□ 2.21
FNDC3B-204ENST00000421757 AMOTQ4VCS5 1084 aa28.84■■■□□ 2.21
FNDC3B-204ENST00000421757 MPRIPQ6WCQ1 1025 aa28.84■■■□□ 2.21
FNDC3B-204ENST00000421757 KDRP35968 1356 aa28.83■■■□□ 2.21
FNDC3B-204ENST00000421757 U2SURPO15042 1029 aaKnown RBP28.82■■■□□ 2.2
FNDC3B-204ENST00000421757 ZNF530Q6P9A1 599 aaPredicted RBP28.81■■■□□ 2.2
FNDC3B-204ENST00000421757 C1orf141Q5JVX7 400 aa28.79■■■□□ 2.2
FNDC3B-204ENST00000421757 ANO8Q9HCE9 1232 aaPredicted RBP28.79■■■□□ 2.2
FNDC3B-204ENST00000421757 COL3A1P02461 1466 aaPredicted RBP28.78■■■□□ 2.2
FNDC3B-204ENST00000421757 HSP90AB1P08238 724 aaKnown RBP28.78■■■□□ 2.2
FNDC3B-204ENST00000421757 STK32BQ9NY57 414 aa28.78■■■□□ 2.2
FNDC3B-204ENST00000421757 SLC27A3Q5K4L6 730 aa28.76■■■□□ 2.19
FNDC3B-204ENST00000421757 TOGARAM1Q9Y4F4 1720 aa28.76■■■□□ 2.19
FNDC3B-204ENST00000421757 LRRC4BQ9NT99 713 aa28.75■■■□□ 2.19
FNDC3B-204ENST00000421757 TMOD3Q9NYL9 352 aa28.75■■■□□ 2.19
FNDC3B-204ENST00000421757 PIGBQ92521 554 aa28.74■■■□□ 2.19
FNDC3B-204ENST00000421757 DCAF5Q96JK2 942 aa28.74■■■□□ 2.19
FNDC3B-204ENST00000421757 NUDCQ9Y266 331 aa28.74■■■□□ 2.19
FNDC3B-204ENST00000421757 KCNQ4P56696 695 aa28.73■■■□□ 2.19
FNDC3B-204ENST00000421757 CCNL1Q9UK58 526 aaPredicted RBP28.73■■■□□ 2.19
FNDC3B-204ENST00000421757 SLC15A2Q16348 729 aa28.72■■■□□ 2.19
FNDC3B-204ENST00000421757 SMARCC1Q92922 1105 aaPredicted RBP28.71■■■□□ 2.19
FNDC3B-204ENST00000421757 ITGB4P16144 1822 aa28.71■■■□□ 2.19
FNDC3B-204ENST00000421757 PALLDQ8WX93 1383 aa28.7■■■□□ 2.18
FNDC3B-204ENST00000421757 ERVV-2B6SEH9 535 aa28.69■■■□□ 2.18
FNDC3B-204ENST00000421757 RALBP1Q15311 655 aa28.68■■■□□ 2.18
FNDC3B-204ENST00000421757 AKAP4Q5JQC9 854 aa28.68■■■□□ 2.18
FNDC3B-204ENST00000421757 LY75O60449 1722 aa28.67■■■□□ 2.18
FNDC3B-204ENST00000421757 U2AF1L5P0DN76 240 aaPredicted RBP28.67■■■□□ 2.18
FNDC3B-204ENST00000421757 CABP4P57796 275 aa28.67■■■□□ 2.18
FNDC3B-204ENST00000421757 U2AF1Q01081 240 aaKnown RBP eCLIP28.67■■■□□ 2.182e-8■■■□□ 17.4
FNDC3B-204ENST00000421757 SRCAPQ6ZRS2 3230 aa28.67■■■□□ 2.18
FNDC3B-204ENST00000421757 MTHFSDQ2M296 383 aaKnown RBP28.66■■■□□ 2.18
FNDC3B-204ENST00000421757 KDM6AO15550 1401 aaPredicted RBP28.66■■■□□ 2.18
FNDC3B-204ENST00000421757 ZNF827Q17R98 1081 aa28.65■■■□□ 2.18
FNDC3B-204ENST00000421757 PAPPAQ13219 1627 aa28.65■■■□□ 2.18
FNDC3B-204ENST00000421757 ASAP1Q9ULH1 1129 aa28.64■■■□□ 2.18
FNDC3B-204ENST00000421757 PRKAR2BP31323 418 aa28.62■■■□□ 2.17
FNDC3B-204ENST00000421757 AKT1S1Q96B36 256 aa28.62■■■□□ 2.17
FNDC3B-204ENST00000421757 PDGFDQ9GZP0 370 aaPredicted RBP28.62■■■□□ 2.17
FNDC3B-204ENST00000421757 RSPH6AQ9H0K4 717 aa28.61■■■□□ 2.17
FNDC3B-204ENST00000421757 ATG3Q9NT62 314 aa28.61■■■□□ 2.17
FNDC3B-204ENST00000421757 TFCP2L1Q9NZI6 479 aa28.61■■■□□ 2.17
FNDC3B-204ENST00000421757 HMGB2P26583 209 aaKnown RBP28.6■■■□□ 2.17
FNDC3B-204ENST00000421757 NFATC2IPQ8NCF5 419 aa28.6■■■□□ 2.17
FNDC3B-204ENST00000421757 LRP5O75197 1615 aa28.59■■■□□ 2.17
FNDC3B-204ENST00000421757 GAS2L2Q8NHY3 880 aa28.59■■■□□ 2.17
FNDC3B-204ENST00000421757 SPON1Q9HCB6 807 aa28.59■■■□□ 2.17
FNDC3B-204ENST00000421757 LOC102724428A0A0B4J2F2 783 aa28.58■■■□□ 2.17
FNDC3B-204ENST00000421757 ZNF316A6NFI3 1004 aaPredicted RBP28.58■■■□□ 2.17
FNDC3B-204ENST00000421757 SIK1P57059 783 aa28.58■■■□□ 2.17
FNDC3B-204ENST00000421757 LGR6Q9HBX8 967 aa28.58■■■□□ 2.17
FNDC3B-204ENST00000421757 RNMTO43148 476 aaKnown RBP28.57■■■□□ 2.16
FNDC3B-204ENST00000421757 FCHSD2O94868 740 aa28.57■■■□□ 2.16
FNDC3B-204ENST00000421757 ZBTB7AO95365 584 aa28.57■■■□□ 2.16
FNDC3B-204ENST00000421757 PHACTR3Q96KR7 559 aa28.56■■■□□ 2.16
FNDC3B-204ENST00000421757 RBM42Q9BTD8 480 aaKnown RBP28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms