RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 ZNF500O60304 480 aaPredicted RBP26.14■■□□□ 1.77
USP48-205ENST00000421625 TERF1P54274 439 aa26.14■■□□□ 1.77
USP48-205ENST00000421625 SDSP20132 328 aa26.13■■□□□ 1.77
USP48-205ENST00000421625 CWC22Q9HCG8 908 aaKnown RBP26.13■■□□□ 1.77
USP48-205ENST00000421625 APBB1O00213 710 aa26.12■■□□□ 1.77
USP48-205ENST00000421625 FAM13BQ9NYF5 915 aa26.12■■□□□ 1.77
USP48-205ENST00000421625 TMEM63CQ9P1W3 806 aa26.12■■□□□ 1.77
USP48-205ENST00000421625 NSFL1CQ9UNZ2 370 aaKnown RBP26.12■■□□□ 1.77
USP48-205ENST00000421625 SMARCA5O60264 1052 aaPredicted RBP26.12■■□□□ 1.77
USP48-205ENST00000421625 CDK19Q9BWU1 502 aa26.12■■□□□ 1.77
USP48-205ENST00000421625 ST18O60284 1047 aa26.11■■□□□ 1.77
USP48-205ENST00000421625 FOXD4L5Q5VV16 416 aaPredicted RBP26.11■■□□□ 1.77
USP48-205ENST00000421625 FOXD4L4Q8WXT5 416 aaPredicted RBP26.11■■□□□ 1.77
USP48-205ENST00000421625 YTHDC2Q9H6S0 1430 aaKnown RBP26.11■■□□□ 1.77
USP48-205ENST00000421625 CLTCQ00610 1675 aaKnown RBP26.11■■□□□ 1.77
USP48-205ENST00000421625 SYCE3A1L190 88 aa26.1■■□□□ 1.77
USP48-205ENST00000421625 FAM83GA6ND36 823 aa26.1■■□□□ 1.77
USP48-205ENST00000421625 CFAP44Q96MT7 982 aa26.1■■□□□ 1.77
USP48-205ENST00000421625 SLC52A1Q9NWF4 448 aa26.1■■□□□ 1.77
USP48-205ENST00000421625 EMILIN1Q9Y6C2 1016 aa26.1■■□□□ 1.77
USP48-205ENST00000421625 STAG3Q9UJ98 1225 aa26.1■■□□□ 1.77
USP48-205ENST00000421625 ZKSCAN5Q9Y2L8 839 aa26.09■■□□□ 1.77
USP48-205ENST00000421625 ATP10DQ9P241 1426 aa26.08■■□□□ 1.77
USP48-205ENST00000421625 UQCRHLA0A096LP55 91 aa26.08■■□□□ 1.77
USP48-205ENST00000421625 UQCRHP07919 91 aa26.08■■□□□ 1.77
USP48-205ENST00000421625 LRSAM1Q6UWE0 723 aa26.08■■□□□ 1.77
USP48-205ENST00000421625 DCTN1Q14203 1278 aa26.07■■□□□ 1.76
USP48-205ENST00000421625 ANKRD44Q8N8A2 993 aa26.07■■□□□ 1.76
USP48-205ENST00000421625 MAP2P11137 1827 aaKnown RBP26.06■■□□□ 1.76
USP48-205ENST00000421625 IL13P35225 146 aa26.05■■□□□ 1.76
USP48-205ENST00000421625 PODXL2Q9NZ53 605 aa26.05■■□□□ 1.76
USP48-205ENST00000421625 KIF13AQ9H1H9 1805 aa26.05■■□□□ 1.76
USP48-205ENST00000421625 CEP85Q6P2H3 762 aa26.05■■□□□ 1.76
USP48-205ENST00000421625 CASC1Q6TDU7 716 aa26.05■■□□□ 1.76
USP48-205ENST00000421625 MYO5BQ9ULV0 1848 aa26.04■■□□□ 1.76
USP48-205ENST00000421625 KIF24Q5T7B8 1368 aa26.04■■□□□ 1.76
USP48-205ENST00000421625 RNF214Q8ND24 703 aa26.04■■□□□ 1.76
USP48-205ENST00000421625 DLG5Q8TDM6 1919 aa26.04■■□□□ 1.76
USP48-205ENST00000421625 RIMS2Q9UQ26 1411 aa26.03■■□□□ 1.76
USP48-205ENST00000421625 ARHGEF40Q8TER5 1519 aa26.03■■□□□ 1.76
USP48-205ENST00000421625 KRT24Q2M2I5 525 aa26.02■■□□□ 1.76
USP48-205ENST00000421625 PREX1Q8TCU6 1659 aa26.01■■□□□ 1.75
USP48-205ENST00000421625 REC8O95072 547 aa26.01■■□□□ 1.75
USP48-205ENST00000421625 RGS12O14924 1447 aa26■■□□□ 1.75
USP48-205ENST00000421625 RPAP2Q8IXW5 612 aaPredicted RBP26■■□□□ 1.75
USP48-205ENST00000421625 CCDC39Q9UFE4 941 aa26■■□□□ 1.75
USP48-205ENST00000421625 MSH6P52701 1360 aa25.99■■□□□ 1.75
USP48-205ENST00000421625 ZRANB1Q9UGI0 708 aa25.99■■□□□ 1.75
USP48-205ENST00000421625 ERC2O15083 957 aa25.99■■□□□ 1.75
USP48-205ENST00000421625 ARID3AQ99856 593 aa25.98■■□□□ 1.75
USP48-205ENST00000421625 LMOD3Q0VAK6 560 aa25.98■■□□□ 1.75
USP48-205ENST00000421625 TMX3Q96JJ7 454 aa25.98■■□□□ 1.75
USP48-205ENST00000421625 MEIS3Q99687 375 aa25.98■■□□□ 1.75
USP48-205ENST00000421625 RTL1A6NKG5 1358 aa25.98■■□□□ 1.75
USP48-205ENST00000421625 MCM5P33992 734 aa25.97■■□□□ 1.75
USP48-205ENST00000421625 NEK4P51957 841 aa25.97■■□□□ 1.75
USP48-205ENST00000421625 CSPP1Q1MSJ5 1256 aa25.97■■□□□ 1.75
USP48-205ENST00000421625 ESF1Q9H501 851 aaKnown RBP25.97■■□□□ 1.75
USP48-205ENST00000421625 MAP7D2Q96T17 732 aa25.97■■□□□ 1.75
USP48-205ENST00000421625 NME9Q86XW9 330 aa25.96■■□□□ 1.75
USP48-205ENST00000421625 MBD3O95983 291 aa25.94■■□□□ 1.74
USP48-205ENST00000421625 RRS1Q15050 365 aaKnown RBP25.94■■□□□ 1.74
USP48-205ENST00000421625 NOL8Q76FK4 1167 aaKnown RBP25.93■■□□□ 1.74
USP48-205ENST00000421625 BRD1O95696 1058 aa25.93■■□□□ 1.74
USP48-205ENST00000421625 PLPPR3Q6T4P5 718 aa25.93■■□□□ 1.74
USP48-205ENST00000421625 WAPLQ7Z5K2 1190 aa25.93■■□□□ 1.74
USP48-205ENST00000421625 TMEM131LA2VDJ0 1609 aa25.93■■□□□ 1.74
USP48-205ENST00000421625 DYNC1I1O14576 645 aa25.92■■□□□ 1.74
USP48-205ENST00000421625 SASS6Q6UVJ0 657 aa25.92■■□□□ 1.74
USP48-205ENST00000421625 CDK12Q9NYV4 1490 aaPredicted RBP25.92■■□□□ 1.74
USP48-205ENST00000421625 ZBTB7CA1YPR0 619 aa25.92■■□□□ 1.74
USP48-205ENST00000421625 TSHZ3Q63HK5 1081 aa25.92■■□□□ 1.74
USP48-205ENST00000421625 FOXD4L6Q3SYB3 417 aaPredicted RBP25.91■■□□□ 1.74
USP48-205ENST00000421625 FOXD4L3Q6VB84 417 aaPredicted RBP25.91■■□□□ 1.74
USP48-205ENST00000421625 AGLP35573 1532 aa25.91■■□□□ 1.74
USP48-205ENST00000421625 PTMAP06454 111 aaKnown RBP25.91■■□□□ 1.74
USP48-205ENST00000421625 TSPY26PQ9H489 355 aa25.91■■□□□ 1.74
USP48-205ENST00000421625 ATP7BP35670 1465 aa25.9■■□□□ 1.74
USP48-205ENST00000421625 ALKQ9UM73 1620 aa25.9■■□□□ 1.74
USP48-205ENST00000421625 PDE1AP54750 535 aa25.9■■□□□ 1.74
USP48-205ENST00000421625 CPSF1Q10570 1443 aaKnown RBP25.9■■□□□ 1.74
USP48-205ENST00000421625 PALD1Q9ULE6 856 aa25.89■■□□□ 1.74
USP48-205ENST00000421625 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.89■■□□□ 1.74
USP48-205ENST00000421625 PRDM4Q9UKN5 801 aa25.89■■□□□ 1.73
USP48-205ENST00000421625 MPNDQ8N594 471 aa25.88■■□□□ 1.73
USP48-205ENST00000421625 GDPD2Q9HCC8 539 aa25.88■■□□□ 1.73
USP48-205ENST00000421625 PPP6R1Q9UPN7 881 aa25.87■■□□□ 1.73
USP48-205ENST00000421625 CUL4AQ13619 759 aa25.87■■□□□ 1.73
USP48-205ENST00000421625 AEBP1Q8IUX7 1158 aa25.87■■□□□ 1.73
USP48-205ENST00000421625 GADD45BO75293 160 aaPredicted RBP25.86■■□□□ 1.73
USP48-205ENST00000421625 OSBPL3Q9H4L5 887 aa25.86■■□□□ 1.73
USP48-205ENST00000421625 KIAA2012Q0VF49 1180 aa25.85■■□□□ 1.73
USP48-205ENST00000421625 MCM10Q7L590 875 aa25.85■■□□□ 1.73
USP48-205ENST00000421625 TRHP20396 242 aaPredicted RBP25.85■■□□□ 1.73
USP48-205ENST00000421625 ESYT1Q9BSJ8 1104 aa25.85■■□□□ 1.73
USP48-205ENST00000421625 JARID2Q92833 1246 aaPredicted RBP25.84■■□□□ 1.73
USP48-205ENST00000421625 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.84■■□□□ 1.73
USP48-205ENST00000421625 EDC4Q6P2E9 1401 aaKnown RBP25.83■■□□□ 1.73
USP48-205ENST00000421625 PTPRCP08575 1304 aa25.83■■□□□ 1.73
USP48-205ENST00000421625 MCM2P49736 904 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms