RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 ERCC4Q92889 916 aaPredicted RBP13.17□□□□□ -0.3
FN1-207ENST00000421182 KIAA0556O60303 1618 aa13.17□□□□□ -0.3
FN1-207ENST00000421182 NGLY1Q96IV0 654 aa13.17□□□□□ -0.3
FN1-207ENST00000421182 DCTN1Q14203 1278 aa13.17□□□□□ -0.3
FN1-207ENST00000421182 ASXL2Q76L83 1435 aa13.17□□□□□ -0.3
FN1-207ENST00000421182 MYL6BP14649 208 aa13.16□□□□□ -0.3
FN1-207ENST00000421182 PPP2R1AP30153 589 aa13.16□□□□□ -0.3
FN1-207ENST00000421182 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
FN1-207ENST00000421182 UBAC1Q9BSL1 405 aa13.16□□□□□ -0.3
FN1-207ENST00000421182 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
FN1-207ENST00000421182 DUOX2Q9NRD8 1548 aa13.16□□□□□ -0.3
FN1-207ENST00000421182 TDO2P48775 406 aa13.16□□□□□ -0.3
FN1-207ENST00000421182 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
FN1-207ENST00000421182 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
FN1-207ENST00000421182 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
FN1-207ENST00000421182 RPGRQ92834 1020 aaKnown RBP13.15□□□□□ -0.3
FN1-207ENST00000421182 PPP4R3AQ6IN85 833 aa13.15□□□□□ -0.3
FN1-207ENST00000421182 NUDT16Q96DE0 195 aaKnown RBP13.15□□□□□ -0.3
FN1-207ENST00000421182 MPHOSPH6Q99547 160 aaKnown RBP13.15□□□□□ -0.3
FN1-207ENST00000421182 EHMT1Q9H9B1 1298 aa13.15□□□□□ -0.3
FN1-207ENST00000421182 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.3
FN1-207ENST00000421182 MTMR7Q9Y216 660 aa13.15□□□□□ -0.3
FN1-207ENST00000421182 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.31
FN1-207ENST00000421182 CEP131Q9UPN4 1083 aa13.15□□□□□ -0.31
FN1-207ENST00000421182 LARP1Q6PKG0 1096 aaKnown RBP13.14□□□□□ -0.31
FN1-207ENST00000421182 HSP90B2PQ58FF3 399 aa13.14□□□□□ -0.31
FN1-207ENST00000421182 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
FN1-207ENST00000421182 CAGE1Q8TC20 777 aa13.14□□□□□ -0.31
FN1-207ENST00000421182 SMC2O95347 1197 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
FN1-207ENST00000421182 ZNF76P36508 570 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 A0A087WZG4 1122 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 FAM13BQ9NYF5 915 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 ZNF592Q92610 1267 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 ANKIB1Q9P2G1 1089 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 CFAP45Q9UL16 551 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 CCDC196A0A1B0GTZ2 297 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 NSD2O96028 1365 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
FN1-207ENST00000421182 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
FN1-207ENST00000421182 AK9Q5TCS8 1911 aa13.12□□□□□ -0.31
FN1-207ENST00000421182 IFIT1P09914 478 aaKnown RBP13.12□□□□□ -0.31
FN1-207ENST00000421182 NSD3Q9BZ95 1437 aa13.12□□□□□ -0.31
FN1-207ENST00000421182 ADAMTS8Q9UP79 889 aa13.12□□□□□ -0.31
FN1-207ENST00000421182 MNS1Q8NEH6 495 aa13.12□□□□□ -0.31
FN1-207ENST00000421182 STK38Q15208 465 aa13.12□□□□□ -0.31
FN1-207ENST00000421182 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
FN1-207ENST00000421182 PDCL3Q9H2J4 239 aa13.11□□□□□ -0.31
FN1-207ENST00000421182 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
FN1-207ENST00000421182 KDM5BQ9UGL1 1544 aa13.11□□□□□ -0.31
FN1-207ENST00000421182 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
FN1-207ENST00000421182 NOB1Q9ULX3 412 aaKnown RBP13.11□□□□□ -0.31
FN1-207ENST00000421182 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
FN1-207ENST00000421182 IMMTQ16891 758 aaKnown RBP13.1□□□□□ -0.31
FN1-207ENST00000421182 PANK1Q8TE04 598 aa13.1□□□□□ -0.31
FN1-207ENST00000421182 NFE2L2Q16236 605 aa13.1□□□□□ -0.31
FN1-207ENST00000421182 FOSBP53539 338 aa13.1□□□□□ -0.31
FN1-207ENST00000421182 RAB34Q9BZG1 259 aa13.1□□□□□ -0.31
FN1-207ENST00000421182 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
FN1-207ENST00000421182 AIDAQ96BJ3 306 aa13.1□□□□□ -0.31
FN1-207ENST00000421182 EXOC5O00471 708 aa13.1□□□□□ -0.31
FN1-207ENST00000421182 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
FN1-207ENST00000421182 UBAP1LF5GYI3 381 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 PDILTQ8N807 584 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 METTL24Q5JXM2 366 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 GSE1Q14687 1217 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 TNRQ92752 1358 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 NCOA1Q15788 1441 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 MATR3P43243 847 aaKnown RBP eCLIP13.09□□□□□ -0.319e-7■■□□□ 13.9
FN1-207ENST00000421182 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.09□□□□□ -0.31
FN1-207ENST00000421182 AACSQ86V21 672 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
FN1-207ENST00000421182 SRGAP3O43295 1099 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 SLC5A1P13866 664 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
FN1-207ENST00000421182 IQCEQ6IPM2 695 aa13.08□□□□□ -0.31
FN1-207ENST00000421182 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.08□□□□□ -0.32
FN1-207ENST00000421182 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
FN1-207ENST00000421182 USP5P45974 858 aa13.08□□□□□ -0.32
FN1-207ENST00000421182 ST5P78524 1137 aa13.08□□□□□ -0.32
FN1-207ENST00000421182 CCDC150Q8NCX0 1101 aa13.08□□□□□ -0.32
FN1-207ENST00000421182 MYO1BO43795 1136 aa13.08□□□□□ -0.32
FN1-207ENST00000421182 IFIT5Q13325 482 aaKnown RBP13.08□□□□□ -0.32
FN1-207ENST00000421182 WDR33Q9C0J8 1336 aaKnown RBP13.08□□□□□ -0.32
FN1-207ENST00000421182 CDC5LQ99459 802 aaKnown RBP13.08□□□□□ -0.32
FN1-207ENST00000421182 NEK4P51957 841 aa13.07□□□□□ -0.32
FN1-207ENST00000421182 BLOC1S2Q6QNY1 142 aa13.07□□□□□ -0.32
FN1-207ENST00000421182 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
FN1-207ENST00000421182 CUL5Q93034 780 aa13.07□□□□□ -0.32
FN1-207ENST00000421182 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
FN1-207ENST00000421182 MAP3K12Q12852 859 aa13.07□□□□□ -0.32
FN1-207ENST00000421182 SPTY2D1Q68D10 685 aaPredicted RBP13.07□□□□□ -0.32
FN1-207ENST00000421182 CCDC39Q9UFE4 941 aa13.07□□□□□ -0.32
FN1-207ENST00000421182 CBFA2T2O43439 604 aa13.07□□□□□ -0.32
FN1-207ENST00000421182 KIF1BPQ96EK5 621 aa13.07□□□□□ -0.32
FN1-207ENST00000421182 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms