RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 USP54Q70EL1 1684 aa20.36■□□□□ 0.85
CTSB-203ENST00000420692 NWD1Q149M9 1564 aa20.36■□□□□ 0.85
CTSB-203ENST00000420692 INTS3Q68E01 1043 aaKnown RBP20.36■□□□□ 0.85
CTSB-203ENST00000420692 CHMP4BQ9H444 224 aaKnown RBP20.35■□□□□ 0.85
CTSB-203ENST00000420692 UPF2Q9HAU5 1272 aaKnown RBP20.35■□□□□ 0.85
CTSB-203ENST00000420692 KIF24Q5T7B8 1368 aa20.35■□□□□ 0.85
CTSB-203ENST00000420692 GCC1Q96CN9 775 aa20.35■□□□□ 0.85
CTSB-203ENST00000420692 HOXC9P31274 260 aa20.34■□□□□ 0.85
CTSB-203ENST00000420692 ANKRD45Q5TZF3 282 aa20.34■□□□□ 0.85
CTSB-203ENST00000420692 RBM33Q96EV2 1170 aaKnown RBP20.34■□□□□ 0.85
CTSB-203ENST00000420692 TBC1D2Q9BYX2 928 aa20.33■□□□□ 0.84
CTSB-203ENST00000420692 MFAP1P55081 439 aaKnown RBP20.32■□□□□ 0.84
CTSB-203ENST00000420692 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
CTSB-203ENST00000420692 C22orf23Q9BZE7 217 aa20.31■□□□□ 0.84
CTSB-203ENST00000420692 BECN1Q14457 450 aa20.31■□□□□ 0.84
CTSB-203ENST00000420692 ANKLE2Q86XL3 938 aa20.3■□□□□ 0.84
CTSB-203ENST00000420692 ATP10DQ9P241 1426 aa20.3■□□□□ 0.84
CTSB-203ENST00000420692 FRAT2O75474 233 aaPredicted RBP20.3■□□□□ 0.84
CTSB-203ENST00000420692 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
CTSB-203ENST00000420692 BMP2KLQ5H9B9 411 aa20.29■□□□□ 0.84
CTSB-203ENST00000420692 G2E3Q7L622 706 aa20.29■□□□□ 0.84
CTSB-203ENST00000420692 TSPYL4Q9UJ04 414 aa20.29■□□□□ 0.84
CTSB-203ENST00000420692 PHF8Q9UPP1 1060 aa20.29■□□□□ 0.84
CTSB-203ENST00000420692 LRRC37A3O60309 1634 aa20.29■□□□□ 0.84
CTSB-203ENST00000420692 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
CTSB-203ENST00000420692 GAS2L2Q8NHY3 880 aa20.29■□□□□ 0.84
CTSB-203ENST00000420692 RTF1Q92541 710 aaKnown RBP20.29■□□□□ 0.84
CTSB-203ENST00000420692 ZNF142P52746 1687 aaPredicted RBP20.28■□□□□ 0.84
CTSB-203ENST00000420692 HAP1P54257 671 aaPredicted RBP20.28■□□□□ 0.84
CTSB-203ENST00000420692 PTPRCP08575 1304 aa20.28■□□□□ 0.84
CTSB-203ENST00000420692 DCTPP1Q9H773 170 aa20.27■□□□□ 0.84
CTSB-203ENST00000420692 MSH6P52701 1360 aa20.27■□□□□ 0.83
CTSB-203ENST00000420692 ANKRD44Q8N8A2 993 aa20.26■□□□□ 0.83
CTSB-203ENST00000420692 IL17REQ8NFR9 667 aa20.26■□□□□ 0.83
CTSB-203ENST00000420692 LTV1Q96GA3 475 aaPredicted RBP20.26■□□□□ 0.83
CTSB-203ENST00000420692 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
CTSB-203ENST00000420692 MEIS3Q99687 375 aa20.25■□□□□ 0.83
CTSB-203ENST00000420692 SLKQ9H2G2 1235 aaPredicted RBP20.25■□□□□ 0.83
CTSB-203ENST00000420692 RTL1A6NKG5 1358 aa20.25■□□□□ 0.83
CTSB-203ENST00000420692 LTN1O94822 1766 aa20.25■□□□□ 0.83
CTSB-203ENST00000420692 CEP85Q6P2H3 762 aa20.25■□□□□ 0.83
CTSB-203ENST00000420692 ADAMTSL3P82987 1691 aa20.24■□□□□ 0.83
CTSB-203ENST00000420692 GNAT3A8MTJ3 354 aa20.23■□□□□ 0.83
CTSB-203ENST00000420692 USHBP1Q8N6Y0 703 aa20.23■□□□□ 0.83
CTSB-203ENST00000420692 NFAT5O94916 1531 aa20.23■□□□□ 0.83
CTSB-203ENST00000420692 SETD1BQ9UPS6 1966 aaKnown RBP20.22■□□□□ 0.83
CTSB-203ENST00000420692 F6X3S4 739 aa20.22■□□□□ 0.83
CTSB-203ENST00000420692 RBM25P49756 843 aaKnown RBP20.22■□□□□ 0.83
CTSB-203ENST00000420692 C14orf37Q86TY3 774 aa20.22■□□□□ 0.83
CTSB-203ENST00000420692 PLEKHM2Q8IWE5 1019 aa20.22■□□□□ 0.83
CTSB-203ENST00000420692 C16orf71Q8IYS4 520 aaPredicted RBP20.22■□□□□ 0.83
CTSB-203ENST00000420692 ADGRL3Q9HAR2 1447 aa20.22■□□□□ 0.83
CTSB-203ENST00000420692 GSPT1P15170 499 aaKnown RBP20.21■□□□□ 0.83
CTSB-203ENST00000420692 RPAP2Q8IXW5 612 aaPredicted RBP20.21■□□□□ 0.83
CTSB-203ENST00000420692 IP6K1Q92551 441 aa20.21■□□□□ 0.83
CTSB-203ENST00000420692 BCL11AQ9H165 835 aa20.21■□□□□ 0.83
CTSB-203ENST00000420692 MAP3K5Q99683 1374 aa20.2■□□□□ 0.82
CTSB-203ENST00000420692 TBC1D9Q6ZT07 1266 aa20.2■□□□□ 0.82
CTSB-203ENST00000420692 ESCO1Q5FWF5 840 aa20.19■□□□□ 0.82
CTSB-203ENST00000420692 OTUD7AQ8TE49 926 aaPredicted RBP20.19■□□□□ 0.82
CTSB-203ENST00000420692 NBPF6Q5VWK0 638 aa20.18■□□□□ 0.82
CTSB-203ENST00000420692 NBPF4Q96M43 638 aa20.18■□□□□ 0.82
CTSB-203ENST00000420692 KIF2CQ99661 725 aa20.18■□□□□ 0.82
CTSB-203ENST00000420692 FAM208AQ9UK61 1670 aaKnown RBP20.18■□□□□ 0.82
CTSB-203ENST00000420692 RGPD2P0DJD1 1756 aa20.17■□□□□ 0.82
CTSB-203ENST00000420692 SPRYD3Q8NCJ5 442 aa20.17■□□□□ 0.82
CTSB-203ENST00000420692 PSME1Q06323 249 aa20.17■□□□□ 0.82
CTSB-203ENST00000420692 SLC4A10Q6U841 1118 aa20.17■□□□□ 0.82
CTSB-203ENST00000420692 GSE1Q14687 1217 aa20.16■□□□□ 0.82
CTSB-203ENST00000420692 TAF7Q15545 349 aaPredicted RBP20.16■□□□□ 0.82
CTSB-203ENST00000420692 NPHP4O75161 1426 aaPredicted RBP20.15■□□□□ 0.82
CTSB-203ENST00000420692 SMARCA5O60264 1052 aaPredicted RBP20.15■□□□□ 0.82
CTSB-203ENST00000420692 NECTIN2Q92692 538 aa20.15■□□□□ 0.82
CTSB-203ENST00000420692 ORAI2Q96SN7 254 aa20.15■□□□□ 0.82
CTSB-203ENST00000420692 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.81
CTSB-203ENST00000420692 FLIIQ13045 1269 aa20.14■□□□□ 0.81
CTSB-203ENST00000420692 CACNA1FO60840 1977 aa20.14■□□□□ 0.81
CTSB-203ENST00000420692 TTC22Q5TAA0 569 aa20.14■□□□□ 0.81
CTSB-203ENST00000420692 CEMIPQ8WUJ3 1361 aa20.13■□□□□ 0.81
CTSB-203ENST00000420692 CCDC30Q5VVM6 783 aa20.13■□□□□ 0.81
CTSB-203ENST00000420692 BABAM1Q9NWV8 329 aa20.13■□□□□ 0.81
CTSB-203ENST00000420692 PHRF1Q9P1Y6 1649 aaKnown RBP20.13■□□□□ 0.81
CTSB-203ENST00000420692 STK31Q9BXU1 1019 aa20.12■□□□□ 0.81
CTSB-203ENST00000420692 LGR6Q9HBX8 967 aa20.12■□□□□ 0.81
CTSB-203ENST00000420692 XPCQ01831 940 aaPredicted RBP20.12■□□□□ 0.81
CTSB-203ENST00000420692 CDC45O75419 566 aa20.11■□□□□ 0.81
CTSB-203ENST00000420692 SNX21Q969T3 373 aa20.11■□□□□ 0.81
CTSB-203ENST00000420692 LRRC59Q96AG4 307 aaKnown RBP20.11■□□□□ 0.81
CTSB-203ENST00000420692 MED1Q15648 1581 aaPredicted RBP20.11■□□□□ 0.81
CTSB-203ENST00000420692 APBB1O00213 710 aa20.11■□□□□ 0.81
CTSB-203ENST00000420692 NCOA3Q9Y6Q9 1424 aa20.1■□□□□ 0.81
CTSB-203ENST00000420692 FKBP5Q13451 457 aaPredicted RBP20.1■□□□□ 0.81
CTSB-203ENST00000420692 KCNH5Q8NCM2 988 aa20.1■□□□□ 0.81
CTSB-203ENST00000420692 ZBTB7CA1YPR0 619 aa20.09■□□□□ 0.81
CTSB-203ENST00000420692 SOS1Q07889 1333 aaPredicted RBP20.09■□□□□ 0.81
CTSB-203ENST00000420692 CD2BP2O95400 341 aaKnown RBP20.08■□□□□ 0.81
CTSB-203ENST00000420692 DDIT3P35638 169 aa20.08■□□□□ 0.81
CTSB-203ENST00000420692 ARHGEF25Q86VW2 580 aa20.08■□□□□ 0.81
CTSB-203ENST00000420692 GCP02774 474 aa20.08■□□□□ 0.8
CTSB-203ENST00000420692 N4BP2Q86UW6 1770 aaPredicted RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms