RNA–Protein interactions for RNA: ENST00000420410.5

LPP-204, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-204ENST00000420410 SBF2Q86WG5 1849 aa25.99■■□□□ 1.75
LPP-204ENST00000420410 MTHFSP49914 203 aa25.98■■□□□ 1.75
LPP-204ENST00000420410 BCL11BQ9C0K0 894 aaPredicted RBP25.98■■□□□ 1.75
LPP-204ENST00000420410 NCAPD2Q15021 1401 aa25.97■■□□□ 1.75
LPP-204ENST00000420410 KCNQ2O43526 872 aa25.96■■□□□ 1.75
LPP-204ENST00000420410 CAMKK2Q96RR4 588 aa25.96■■□□□ 1.75
LPP-204ENST00000420410 SHANK3Q9BYB0 1731 aa25.93■■□□□ 1.74
LPP-204ENST00000420410 IGSF1Q8N6C5 1336 aa25.92■■□□□ 1.74
LPP-204ENST00000420410 KAT6BQ8WYB5 2073 aa25.91■■□□□ 1.74
LPP-204ENST00000420410 IL13P35225 146 aa25.9■■□□□ 1.74
LPP-204ENST00000420410 PARD3Q8TEW0 1356 aa25.9■■□□□ 1.74
LPP-204ENST00000420410 PCDH11XQ9BZA7 1347 aa25.89■■□□□ 1.74
LPP-204ENST00000420410 PCDH11YQ9BZA8 1340 aa25.89■■□□□ 1.74
LPP-204ENST00000420410 NHSQ6T4R5 1651 aa25.89■■□□□ 1.73
LPP-204ENST00000420410 SYTL4Q96C24 671 aaPredicted RBP25.88■■□□□ 1.73
LPP-204ENST00000420410 PLSCR1O15162 318 aa25.87■■□□□ 1.73
LPP-204ENST00000420410 CYP27B1O15528 508 aa25.87■■□□□ 1.73
LPP-204ENST00000420410 DDX10Q13206 875 aaKnown RBP25.87■■□□□ 1.73
LPP-204ENST00000420410 AEBP1Q8IUX7 1158 aa25.87■■□□□ 1.73
LPP-204ENST00000420410 SPG7Q9UQ90 795 aa25.87■■□□□ 1.73
LPP-204ENST00000420410 PRIM1P49642 420 aaKnown RBP25.86■■□□□ 1.73
LPP-204ENST00000420410 SULT6B1Q6IMI4 303 aa25.85■■□□□ 1.73
LPP-204ENST00000420410 PKD1L3Q7Z443 1732 aa25.85■■□□□ 1.73
LPP-204ENST00000420410 DIAPH1O60610 1272 aaKnown RBP25.84■■□□□ 1.73
LPP-204ENST00000420410 DOT1LQ8TEK3 1739 aa25.83■■□□□ 1.73
LPP-204ENST00000420410 PSDA5PKW4 1024 aaPredicted RBP25.83■■□□□ 1.73
LPP-204ENST00000420410 PPP2R1AP30153 589 aa25.82■■□□□ 1.72
LPP-204ENST00000420410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.82■■□□□ 1.72
LPP-204ENST00000420410 RREB1Q92766 1687 aa25.82■■□□□ 1.72
LPP-204ENST00000420410 BTAF1O14981 1849 aa25.81■■□□□ 1.72
LPP-204ENST00000420410 HMOX1P09601 288 aa25.8■■□□□ 1.72
LPP-204ENST00000420410 PROM2Q8N271 834 aa25.8■■□□□ 1.72
LPP-204ENST00000420410 NUP188Q5SRE5 1749 aa25.8■■□□□ 1.72
LPP-204ENST00000420410 RGPD3A6NKT7 1758 aaPredicted RBP25.79■■□□□ 1.72
LPP-204ENST00000420410 RGPD4Q7Z3J3 1758 aa25.79■■□□□ 1.72
LPP-204ENST00000420410 COL3A1P02461 1466 aaPredicted RBP25.79■■□□□ 1.72
LPP-204ENST00000420410 R3HDM1Q15032 1099 aaKnown RBP25.79■■□□□ 1.72
LPP-204ENST00000420410 TXNRD1Q16881 649 aa25.79■■□□□ 1.72
LPP-204ENST00000420410 PLEKHO1Q53GL0 409 aaPredicted RBP25.78■■□□□ 1.72
LPP-204ENST00000420410 KDRP35968 1356 aa25.78■■□□□ 1.72
LPP-204ENST00000420410 U2SURPO15042 1029 aaKnown RBP25.77■■□□□ 1.72
LPP-204ENST00000420410 PHKG2P15735 406 aa25.77■■□□□ 1.72
LPP-204ENST00000420410 IFNL2Q8IZJ0 200 aa25.77■■□□□ 1.72
LPP-204ENST00000420410 CFAP53Q96M91 514 aa25.77■■□□□ 1.72
LPP-204ENST00000420410 NKX1-1Q15270 411 aaPredicted RBP25.76■■□□□ 1.71
LPP-204ENST00000420410 NBPF14Q5TI25 921 aa25.76■■□□□ 1.71
LPP-204ENST00000420410 PLEKHG2Q9H7P9 1386 aa25.75■■□□□ 1.71
LPP-204ENST00000420410 AMOTQ4VCS5 1084 aa25.75■■□□□ 1.71
LPP-204ENST00000420410 ZNF530Q6P9A1 599 aaPredicted RBP25.75■■□□□ 1.71
LPP-204ENST00000420410 MPRIPQ6WCQ1 1025 aa25.75■■□□□ 1.71
LPP-204ENST00000420410 TOGARAM1Q9Y4F4 1720 aa25.73■■□□□ 1.71
LPP-204ENST00000420410 ANO8Q9HCE9 1232 aaPredicted RBP25.71■■□□□ 1.71
LPP-204ENST00000420410 C1orf141Q5JVX7 400 aa25.7■■□□□ 1.7
LPP-204ENST00000420410 KCNQ4P56696 695 aa25.68■■□□□ 1.7
LPP-204ENST00000420410 PIGBQ92521 554 aa25.68■■□□□ 1.7
LPP-204ENST00000420410 LRRC4BQ9NT99 713 aa25.68■■□□□ 1.7
LPP-204ENST00000420410 HSP90AB1P08238 724 aaKnown RBP25.67■■□□□ 1.7
LPP-204ENST00000420410 TMOD3Q9NYL9 352 aa25.67■■□□□ 1.7
LPP-204ENST00000420410 NUDCQ9Y266 331 aa25.67■■□□□ 1.7
LPP-204ENST00000420410 ITGB4P16144 1822 aa25.66■■□□□ 1.7
LPP-204ENST00000420410 DCAF5Q96JK2 942 aa25.66■■□□□ 1.7
LPP-204ENST00000420410 RALBP1Q15311 655 aa25.65■■□□□ 1.7
LPP-204ENST00000420410 STK32BQ9NY57 414 aa25.65■■□□□ 1.7
LPP-204ENST00000420410 KDM6AO15550 1401 aaPredicted RBP25.64■■□□□ 1.7
LPP-204ENST00000420410 U2AF1L5P0DN76 240 aaPredicted RBP25.64■■□□□ 1.7
LPP-204ENST00000420410 U2AF1Q01081 240 aaKnown RBP eCLIP25.64■■□□□ 1.7
LPP-204ENST00000420410 SLC27A3Q5K4L6 730 aa25.64■■□□□ 1.7
LPP-204ENST00000420410 SRCAPQ6ZRS2 3230 aa25.63■■□□□ 1.69
LPP-204ENST00000420410 MTHFSDQ2M296 383 aaKnown RBP25.63■■□□□ 1.69
LPP-204ENST00000420410 CCNL1Q9UK58 526 aaPredicted RBP25.63■■□□□ 1.69
LPP-204ENST00000420410 PALLDQ8WX93 1383 aa25.63■■□□□ 1.69
LPP-204ENST00000420410 ZNF316A6NFI3 1004 aaPredicted RBP25.62■■□□□ 1.69
LPP-204ENST00000420410 ERVV-2B6SEH9 535 aa25.61■■□□□ 1.69
LPP-204ENST00000420410 SLC15A2Q16348 729 aa25.61■■□□□ 1.69
LPP-204ENST00000420410 AKAP4Q5JQC9 854 aa25.61■■□□□ 1.69
LPP-204ENST00000420410 LY75O60449 1722 aa25.6■■□□□ 1.69
LPP-204ENST00000420410 PRKAR2BP31323 418 aa25.6■■□□□ 1.69
LPP-204ENST00000420410 CABP4P57796 275 aa25.6■■□□□ 1.69
LPP-204ENST00000420410 SMARCC1Q92922 1105 aaPredicted RBP25.6■■□□□ 1.69
LPP-204ENST00000420410 RSPH6AQ9H0K4 717 aa25.6■■□□□ 1.69
LPP-204ENST00000420410 ASAP1Q9ULH1 1129 aa25.6■■□□□ 1.69
LPP-204ENST00000420410 ZNF827Q17R98 1081 aa25.59■■□□□ 1.69
LPP-204ENST00000420410 PAPPAQ13219 1627 aa25.59■■□□□ 1.69
LPP-204ENST00000420410 PDGFDQ9GZP0 370 aaPredicted RBP25.57■■□□□ 1.68
LPP-204ENST00000420410 PHACTR3Q96KR7 559 aa25.56■■□□□ 1.68
LPP-204ENST00000420410 LGR6Q9HBX8 967 aa25.56■■□□□ 1.68
LPP-204ENST00000420410 ATG3Q9NT62 314 aa25.56■■□□□ 1.68
LPP-204ENST00000420410 MYBBP1AQ9BQG0 1328 aaKnown RBP25.56■■□□□ 1.68
LPP-204ENST00000420410 NFATC2IPQ8NCF5 419 aa25.54■■□□□ 1.68
LPP-204ENST00000420410 GAS2L2Q8NHY3 880 aa25.54■■□□□ 1.68
LPP-204ENST00000420410 AKT1S1Q96B36 256 aa25.54■■□□□ 1.68
LPP-204ENST00000420410 LOC102724428A0A0B4J2F2 783 aa25.53■■□□□ 1.68
LPP-204ENST00000420410 RNMTO43148 476 aaKnown RBP25.53■■□□□ 1.68
LPP-204ENST00000420410 FCHSD2O94868 740 aa25.53■■□□□ 1.68
LPP-204ENST00000420410 SIK1P57059 783 aa25.53■■□□□ 1.68
LPP-204ENST00000420410 PRKRIP1Q9H875 184 aaPredicted RBP25.52■■□□□ 1.68
LPP-204ENST00000420410 SCN11AQ9UI33 1791 aa25.51■■□□□ 1.67
LPP-204ENST00000420410 TFCP2L1Q9NZI6 479 aa25.51■■□□□ 1.67
LPP-204ENST00000420410 MAP3K5Q99683 1374 aa25.5■■□□□ 1.67
LPP-204ENST00000420410 GNAT3A8MTJ3 354 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms