RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 PTPN14Q15678 1187 aa11.81□□□□□ -0.52
LINC00963-202ENST00000419300 CFAP74Q9C0B2 1584 aa11.81□□□□□ -0.52
LINC00963-202ENST00000419300 GBP2P32456 591 aaPredicted RBP11.81□□□□□ -0.52
LINC00963-202ENST00000419300 CCDC83Q8IWF9 413 aa11.81□□□□□ -0.52
LINC00963-202ENST00000419300 SYCE3A1L190 88 aa11.81□□□□□ -0.52
LINC00963-202ENST00000419300 IMMTQ16891 758 aaKnown RBP11.81□□□□□ -0.52
LINC00963-202ENST00000419300 ZNF397Q8NF99 534 aaPredicted RBP11.81□□□□□ -0.52
LINC00963-202ENST00000419300 CDK5RAP3Q96JB5 506 aa11.81□□□□□ -0.52
LINC00963-202ENST00000419300 UPF3BQ9BZI7 483 aaKnown RBP11.81□□□□□ -0.52
LINC00963-202ENST00000419300 UVSSAQ2YD98 709 aa11.81□□□□□ -0.52
LINC00963-202ENST00000419300 GIMAP7Q8NHV1 300 aa11.81□□□□□ -0.52
LINC00963-202ENST00000419300 PRM3Q9NNZ6 103 aa11.81□□□□□ -0.52
LINC00963-202ENST00000419300 CCDC27Q2M243 656 aa11.81□□□□□ -0.52
LINC00963-202ENST00000419300 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
LINC00963-202ENST00000419300 DUOX2Q9NRD8 1548 aa11.8□□□□□ -0.52
LINC00963-202ENST00000419300 IVLP07476 585 aa11.8□□□□□ -0.52
LINC00963-202ENST00000419300 EZRP15311 586 aaKnown RBP11.8□□□□□ -0.52
LINC00963-202ENST00000419300 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
LINC00963-202ENST00000419300 MAGI1Q96QZ7 1491 aaPredicted RBP11.8□□□□□ -0.52
LINC00963-202ENST00000419300 LARP1BQ659C4 914 aaKnown RBP11.8□□□□□ -0.52
LINC00963-202ENST00000419300 CCDC171Q6TFL3 1326 aa11.8□□□□□ -0.52
LINC00963-202ENST00000419300 RAB11FIP3O75154 756 aa11.8□□□□□ -0.52
LINC00963-202ENST00000419300 CCAR1Q8IX12 1150 aaKnown RBP11.8□□□□□ -0.52
LINC00963-202ENST00000419300 CRACR2AQ9BSW2 395 aa11.8□□□□□ -0.52
LINC00963-202ENST00000419300 MINK1Q8N4C8 1332 aaPredicted RBP11.8□□□□□ -0.52
LINC00963-202ENST00000419300 FBXW7Q969H0 707 aa11.8□□□□□ -0.52
LINC00963-202ENST00000419300 RPGRIP1LQ68CZ1 1315 aa11.79□□□□□ -0.52
LINC00963-202ENST00000419300 ABCA5Q8WWZ7 1642 aa11.79□□□□□ -0.52
LINC00963-202ENST00000419300 SCAF11Q99590 1463 aaKnown RBP11.79□□□□□ -0.52
LINC00963-202ENST00000419300 GTF2E1P29083 439 aaPredicted RBP11.79□□□□□ -0.52
LINC00963-202ENST00000419300 KIF5CO60282 957 aa11.79□□□□□ -0.52
LINC00963-202ENST00000419300 EHBP1Q8NDI1 1231 aa11.79□□□□□ -0.52
LINC00963-202ENST00000419300 DNAJC2Q99543 621 aaKnown RBP11.79□□□□□ -0.52
LINC00963-202ENST00000419300 CLCN1P35523 988 aa11.79□□□□□ -0.52
LINC00963-202ENST00000419300 SYCP1Q15431 976 aa11.79□□□□□ -0.52
LINC00963-202ENST00000419300 ZSCAN25Q6NSZ9 544 aa11.79□□□□□ -0.52
LINC00963-202ENST00000419300 NSD3Q9BZ95 1437 aa11.79□□□□□ -0.52
LINC00963-202ENST00000419300 CASQ1P31415 396 aa11.78□□□□□ -0.52
LINC00963-202ENST00000419300 TWISTNBQ3B726 338 aaPredicted RBP11.78□□□□□ -0.52
LINC00963-202ENST00000419300 EPB41L2O43491 1005 aaKnown RBP11.78□□□□□ -0.52
LINC00963-202ENST00000419300 DYDC1Q8WWB3 177 aa11.78□□□□□ -0.52
LINC00963-202ENST00000419300 GTPBP4Q9BZE4 634 aaKnown RBP11.78□□□□□ -0.52
LINC00963-202ENST00000419300 PHAXQ9H814 394 aaKnown RBP11.78□□□□□ -0.52
LINC00963-202ENST00000419300 MTHFSP49914 203 aa11.78□□□□□ -0.52
LINC00963-202ENST00000419300 STX1AQ16623 288 aa11.78□□□□□ -0.52
LINC00963-202ENST00000419300 CTNNA3Q9UI47 895 aa11.78□□□□□ -0.52
LINC00963-202ENST00000419300 ARHGAP29Q52LW3 1261 aa11.78□□□□□ -0.52
LINC00963-202ENST00000419300 NBPF1Q3BBV0 1214 aa11.78□□□□□ -0.52
LINC00963-202ENST00000419300 SEPT7Q16181 437 aaKnown RBP11.78□□□□□ -0.52
LINC00963-202ENST00000419300 TIGD1Q96MW7 591 aa11.78□□□□□ -0.52
LINC00963-202ENST00000419300 PDE4CQ08493 712 aa11.78□□□□□ -0.52
LINC00963-202ENST00000419300 ELL2O00472 640 aaPredicted RBP11.78□□□□□ -0.52
LINC00963-202ENST00000419300 ANO10Q9NW15 660 aa11.77□□□□□ -0.52
LINC00963-202ENST00000419300 MLECQ14165 292 aa11.77□□□□□ -0.52
LINC00963-202ENST00000419300 JAKMIP3Q5VZ66 844 aa11.77□□□□□ -0.52
LINC00963-202ENST00000419300 SLFN5Q08AF3 891 aa11.77□□□□□ -0.53
LINC00963-202ENST00000419300 CTR9Q6PD62 1173 aa11.77□□□□□ -0.53
LINC00963-202ENST00000419300 CCDC150Q8NCX0 1101 aa11.77□□□□□ -0.53
LINC00963-202ENST00000419300 C11orf95C9JLR9 678 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-202ENST00000419300 HSP90AB3PQ58FF7 597 aa11.77□□□□□ -0.53
LINC00963-202ENST00000419300 KLHL40Q2TBA0 621 aa11.77□□□□□ -0.53
LINC00963-202ENST00000419300 TCHHQ07283 1943 aa11.77□□□□□ -0.53
LINC00963-202ENST00000419300 CCDC102AQ96A19 550 aa11.77□□□□□ -0.53
LINC00963-202ENST00000419300 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
LINC00963-202ENST00000419300 ENOX2Q16206 610 aaKnown RBP11.77□□□□□ -0.53
LINC00963-202ENST00000419300 NOL7Q9UMY1 257 aaKnown RBP11.77□□□□□ -0.53
LINC00963-202ENST00000419300 MYH10P35580 1976 aa11.77□□□□□ -0.53
LINC00963-202ENST00000419300 SHANK2Q9UPX8 1470 aa11.76□□□□□ -0.53
LINC00963-202ENST00000419300 EIF2S2P20042 333 aaKnown RBP11.76□□□□□ -0.53
LINC00963-202ENST00000419300 PDRG1Q9NUG6 133 aa11.76□□□□□ -0.53
LINC00963-202ENST00000419300 NACAP1Q9BZK3 213 aa11.76□□□□□ -0.53
LINC00963-202ENST00000419300 GNL3LQ9NVN8 582 aaKnown RBP11.76□□□□□ -0.53
LINC00963-202ENST00000419300 KRT222Q8N1A0 295 aa11.75□□□□□ -0.53
LINC00963-202ENST00000419300 BMP2KLQ5H9B9 411 aa11.75□□□□□ -0.53
LINC00963-202ENST00000419300 TTLL5Q6EMB2 1281 aa11.75□□□□□ -0.53
LINC00963-202ENST00000419300 RIC3Q7Z5B4 369 aa11.75□□□□□ -0.53
LINC00963-202ENST00000419300 CDCA7LQ96GN5 454 aa11.75□□□□□ -0.53
LINC00963-202ENST00000419300 PYM1Q9BRP8 204 aaKnown RBP11.75□□□□□ -0.53
LINC00963-202ENST00000419300 DDX19AQ9NUU7 478 aaKnown RBP11.75□□□□□ -0.53
LINC00963-202ENST00000419300 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
LINC00963-202ENST00000419300 CASTP20810 708 aaKnown RBP11.75□□□□□ -0.53
LINC00963-202ENST00000419300 BLOC1S2Q6QNY1 142 aa11.75□□□□□ -0.53
LINC00963-202ENST00000419300 FCHSD2O94868 740 aa11.75□□□□□ -0.53
LINC00963-202ENST00000419300 ZMYM3Q14202 1370 aa11.75□□□□□ -0.53
LINC00963-202ENST00000419300 LTV1Q96GA3 475 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-202ENST00000419300 KIAA1328Q86T90 577 aa11.74□□□□□ -0.53
LINC00963-202ENST00000419300 UBE2HP62256 183 aa11.74□□□□□ -0.53
LINC00963-202ENST00000419300 RPAP2Q8IXW5 612 aaPredicted RBP11.74□□□□□ -0.53
LINC00963-202ENST00000419300 SRRTQ9BXP5 876 aaKnown RBP11.74□□□□□ -0.53
LINC00963-202ENST00000419300 ERICH4A6NGS2 130 aa11.74□□□□□ -0.53
LINC00963-202ENST00000419300 FGFR1OPO95684 399 aaKnown RBP11.74□□□□□ -0.53
LINC00963-202ENST00000419300 KIAA0586Q9BVV6 1533 aa11.74□□□□□ -0.53
LINC00963-202ENST00000419300 PTPRCP08575 1304 aa11.74□□□□□ -0.53
LINC00963-202ENST00000419300 MSH5O43196 834 aa11.74□□□□□ -0.53
LINC00963-202ENST00000419300 WASHC4Q2M389 1173 aa11.74□□□□□ -0.53
LINC00963-202ENST00000419300 TBC1D32Q96NH3 1257 aa11.74□□□□□ -0.53
LINC00963-202ENST00000419300 SURF6O75683 361 aaKnown RBP11.74□□□□□ -0.53
LINC00963-202ENST00000419300 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
LINC00963-202ENST00000419300 CCDC91Q7Z6B0 441 aa11.74□□□□□ -0.53
LINC00963-202ENST00000419300 SYNMO15061 1565 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms