RNA–Protein interactions for RNA: ENST00000419004.2

SNX5-203, Transcript of sorting nexin 5, humanhuman

TSL 5

Gene SNX5, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-203ENST00000419004 TNRC6CQ9HCJ0 1690 aaKnown RBP21.59■■□□□ 1.05
SNX5-203ENST00000419004 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
SNX5-203ENST00000419004 MINK1Q8N4C8 1332 aaPredicted RBP21.56■■□□□ 1.04
SNX5-203ENST00000419004 ITSN1Q15811 1721 aa21.56■■□□□ 1.04
SNX5-203ENST00000419004 CFAP44Q96MT7 982 aa21.56■■□□□ 1.04
SNX5-203ENST00000419004 CSB-PGBD3P0DP91 1061 aa21.55■■□□□ 1.04
SNX5-203ENST00000419004 BCS1LQ9Y276 419 aa21.55■■□□□ 1.04
SNX5-203ENST00000419004 TNRC18O15417 2968 aaPredicted RBP21.55■■□□□ 1.04
SNX5-203ENST00000419004 STAC3Q96MF2 364 aa21.54■■□□□ 1.04
SNX5-203ENST00000419004 CREBZFQ9NS37 354 aa21.53■■□□□ 1.04
SNX5-203ENST00000419004 ABCC6O95255 1503 aa21.52■■□□□ 1.04
SNX5-203ENST00000419004 NBPF1Q3BBV0 1214 aa21.51■■□□□ 1.03
SNX5-203ENST00000419004 FLAD1Q8NFF5 587 aa21.51■■□□□ 1.03
SNX5-203ENST00000419004 AXIN2Q9Y2T1 843 aa21.51■■□□□ 1.03
SNX5-203ENST00000419004 PKD1L3Q7Z443 1732 aa21.51■■□□□ 1.03
SNX5-203ENST00000419004 NUDT16Q96DE0 195 aaKnown RBP21.5■■□□□ 1.03
SNX5-203ENST00000419004 CCDC7Q96M83 1385 aa21.49■■□□□ 1.03
SNX5-203ENST00000419004 ADGRB1O14514 1584 aa21.49■■□□□ 1.03
SNX5-203ENST00000419004 WBP1LQ9NX94 342 aa21.49■■□□□ 1.03
SNX5-203ENST00000419004 CCNL1Q9UK58 526 aaPredicted RBP21.49■■□□□ 1.03
SNX5-203ENST00000419004 ACEP12821 1306 aa21.49■■□□□ 1.03
SNX5-203ENST00000419004 PPIP5K1Q6PFW1 1433 aa21.48■■□□□ 1.03
SNX5-203ENST00000419004 HSPA8P11142 646 aaKnown RBP21.48■■□□□ 1.03
SNX5-203ENST00000419004 COL18A1P39060 1754 aa21.48■■□□□ 1.03
SNX5-203ENST00000419004 POLR3AO14802 1390 aaPredicted RBP21.48■■□□□ 1.03
SNX5-203ENST00000419004 PRPF38BQ5VTL8 546 aaKnown RBP21.46■■□□□ 1.03
SNX5-203ENST00000419004 LY75O60449 1722 aa21.46■■□□□ 1.03
SNX5-203ENST00000419004 VEGFAP15692 232 aaPredicted RBP21.45■■□□□ 1.02
SNX5-203ENST00000419004 RNF181Q9P0P0 153 aa21.45■■□□□ 1.02
SNX5-203ENST00000419004 CNTNAP1P78357 1384 aa21.45■■□□□ 1.02
SNX5-203ENST00000419004 TONSLQ96HA7 1378 aa21.43■■□□□ 1.02
SNX5-203ENST00000419004 FCHSD2O94868 740 aa21.42■■□□□ 1.02
SNX5-203ENST00000419004 RGPD5Q99666 1765 aa21.41■■□□□ 1.02
SNX5-203ENST00000419004 SYTL4Q96C24 671 aaPredicted RBP21.41■■□□□ 1.02
SNX5-203ENST00000419004 TGFB2P61812 414 aa21.4■■□□□ 1.02
SNX5-203ENST00000419004 N4BP2Q86UW6 1770 aaPredicted RBP21.39■■□□□ 1.01
SNX5-203ENST00000419004 A0A0G2JLW4 131 aa21.38■■□□□ 1.01
SNX5-203ENST00000419004 VEGFBP49765 207 aa21.38■■□□□ 1.01
SNX5-203ENST00000419004 IL2RBP14784 551 aa21.37■■□□□ 1.01
SNX5-203ENST00000419004 NLRP6P59044 892 aa21.37■■□□□ 1.01
SNX5-203ENST00000419004 HMGB2P26583 209 aaKnown RBP21.36■■□□□ 1.01
SNX5-203ENST00000419004 USP54Q70EL1 1684 aa21.36■■□□□ 1.01
SNX5-203ENST00000419004 PLEKHG3A1L390 1219 aa21.35■■□□□ 1.01
SNX5-203ENST00000419004 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
SNX5-203ENST00000419004 CPSF1Q10570 1443 aaKnown RBP21.35■■□□□ 1.01
SNX5-203ENST00000419004 ROCK2O75116 1388 aaKnown RBP21.35■■□□□ 1.01
SNX5-203ENST00000419004 SLIT3O75094 1523 aa21.34■■□□□ 1.01
SNX5-203ENST00000419004 VIRMAQ69YN4 1812 aaKnown RBP21.34■■□□□ 1.01
SNX5-203ENST00000419004 CCDC61Q9Y6R9 512 aa21.34■■□□□ 1.01
SNX5-203ENST00000419004 KIAA1551Q9HCM1 1747 aa21.33■■□□□ 1.01
SNX5-203ENST00000419004 KIF13BQ9NQT8 1826 aa21.32■■□□□ 1
SNX5-203ENST00000419004 MAP2K1Q02750 393 aaPredicted RBP21.32■■□□□ 1
SNX5-203ENST00000419004 CDK19Q9BWU1 502 aa21.32■■□□□ 1
SNX5-203ENST00000419004 CENPJQ9HC77 1338 aaPredicted RBP21.31■■□□□ 1
SNX5-203ENST00000419004 QRICH2Q9H0J4 1663 aa21.31■■□□□ 1
SNX5-203ENST00000419004 ARHGEF25Q86VW2 580 aa21.31■■□□□ 1
SNX5-203ENST00000419004 ARFGEF1Q9Y6D6 1849 aa21.31■■□□□ 1
SNX5-203ENST00000419004 C5P01031 1676 aa21.31■■□□□ 1
SNX5-203ENST00000419004 GLTPD2A6NH11 291 aa21.3■■□□□ 1
SNX5-203ENST00000419004 SMIM5Q71RC9 77 aa21.3■■□□□ 1
SNX5-203ENST00000419004 DDX54Q8TDD1 881 aaKnown RBP21.3■■□□□ 1
SNX5-203ENST00000419004 ANKRD36BQ8N2N9 1353 aa21.3■■□□□ 1
SNX5-203ENST00000419004 SBF1O95248 1867 aa21.3■■□□□ 1
SNX5-203ENST00000419004 ERBB3P21860 1342 aa21.29■■□□□ 1
SNX5-203ENST00000419004 ZC3H4Q9UPT8 1303 aaKnown RBP21.29■■□□□ 1
SNX5-203ENST00000419004 CCER1Q8TC90 406 aaPredicted RBP21.29■■□□□ 1
SNX5-203ENST00000419004 DPEP1P16444 411 aa21.28■■□□□ 1
SNX5-203ENST00000419004 SRPK2P78362 688 aaKnown RBP21.28■■□□□ 1
SNX5-203ENST00000419004 CARD11Q9BXL7 1154 aa21.28■■□□□ 1
SNX5-203ENST00000419004 USP47Q96K76 1375 aa21.27■■□□□ 1
SNX5-203ENST00000419004 MCOLN1Q9GZU1 580 aa21.27■■□□□ 1
SNX5-203ENST00000419004 NLRP2Q9NX02 1062 aa21.27■■□□□ 1
SNX5-203ENST00000419004 BRCA1P38398 1863 aaKnown RBP21.26■□□□□ 0.99
SNX5-203ENST00000419004 PHF14O94880 888 aa21.26■□□□□ 0.99
SNX5-203ENST00000419004 CHADLQ6NUI6 762 aa21.26■□□□□ 0.99
SNX5-203ENST00000419004 GCC1Q96CN9 775 aa21.26■□□□□ 0.99
SNX5-203ENST00000419004 CABP2Q9NPB3 220 aa21.26■□□□□ 0.99
SNX5-203ENST00000419004 NSD2O96028 1365 aa21.25■□□□□ 0.99
SNX5-203ENST00000419004 AK7Q96M32 723 aa21.25■□□□□ 0.99
SNX5-203ENST00000419004 DLL1O00548 723 aa21.24■□□□□ 0.99
SNX5-203ENST00000419004 MMP10P09238 476 aa21.23■□□□□ 0.99
SNX5-203ENST00000419004 KCNH5Q8NCM2 988 aa21.23■□□□□ 0.99
SNX5-203ENST00000419004 DCAF5Q96JK2 942 aa21.23■□□□□ 0.99
SNX5-203ENST00000419004 DOT1LQ8TEK3 1739 aa21.22■□□□□ 0.99
SNX5-203ENST00000419004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.22■□□□□ 0.99
SNX5-203ENST00000419004 TAF1LQ8IZX4 1826 aa21.21■□□□□ 0.99
SNX5-203ENST00000419004 BEGAINQ9BUH8 593 aa21.21■□□□□ 0.99
SNX5-203ENST00000419004 SOX12O15370 315 aa21.2■□□□□ 0.98
SNX5-203ENST00000419004 AMIGO3Q86WK7 504 aa21.2■□□□□ 0.98
SNX5-203ENST00000419004 PIM2Q9P1W9 311 aa21.2■□□□□ 0.98
SNX5-203ENST00000419004 NSD3Q9BZ95 1437 aa21.2■□□□□ 0.98
SNX5-203ENST00000419004 TMEM88BA6NKF7 163 aa21.19■□□□□ 0.98
SNX5-203ENST00000419004 DALRD3Q5D0E6 543 aaKnown RBP21.19■□□□□ 0.98
SNX5-203ENST00000419004 POTECB2RU33 542 aa21.18■□□□□ 0.98
SNX5-203ENST00000419004 UBR3Q6ZT12 1888 aa21.17■□□□□ 0.98
SNX5-203ENST00000419004 C4BP0C0L5 1744 aa21.16■□□□□ 0.98
SNX5-203ENST00000419004 TOGARAM1Q9Y4F4 1720 aa21.16■□□□□ 0.98
SNX5-203ENST00000419004 EVC2Q86UK5 1308 aa21.16■□□□□ 0.98
SNX5-203ENST00000419004 KCNA3P22001 575 aa21.16■□□□□ 0.98
SNX5-203ENST00000419004 CCDC87Q9NVE4 849 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms