RNA–Protein interactions for RNA: ENST00000418897.5

DDX39B-204, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-204ENST00000418897 NLRP2Q9NX02 1062 aa17.47■□□□□ 0.39
DDX39B-204ENST00000418897 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
DDX39B-204ENST00000418897 CCNL1Q9UK58 526 aaPredicted RBP17.46■□□□□ 0.39
DDX39B-204ENST00000418897 ABCC6O95255 1503 aa17.46■□□□□ 0.39
DDX39B-204ENST00000418897 TTC21BQ7Z4L5 1316 aa17.46■□□□□ 0.38
DDX39B-204ENST00000418897 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
DDX39B-204ENST00000418897 PRIM1P49642 420 aaKnown RBP17.43■□□□□ 0.38
DDX39B-204ENST00000418897 DDX54Q8TDD1 881 aaKnown RBP17.43■□□□□ 0.38
DDX39B-204ENST00000418897 ERBB3P21860 1342 aa17.41■□□□□ 0.38
DDX39B-204ENST00000418897 NFAT5O94916 1531 aa17.41■□□□□ 0.38
DDX39B-204ENST00000418897 CENPJQ9HC77 1338 aaPredicted RBP17.4■□□□□ 0.38
DDX39B-204ENST00000418897 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
DDX39B-204ENST00000418897 NSD2O96028 1365 aa17.38■□□□□ 0.37
DDX39B-204ENST00000418897 SMC1BQ8NDV3 1235 aa17.37■□□□□ 0.37
DDX39B-204ENST00000418897 ANKRD24Q8TF21 1146 aa17.37■□□□□ 0.37
DDX39B-204ENST00000418897 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
DDX39B-204ENST00000418897 KDM2BQ8NHM5 1336 aa17.36■□□□□ 0.37
DDX39B-204ENST00000418897 BCS1LQ9Y276 419 aa17.35■□□□□ 0.37
DDX39B-204ENST00000418897 ANKRD36BQ8N2N9 1353 aa17.35■□□□□ 0.37
DDX39B-204ENST00000418897 LY75O60449 1722 aa17.34■□□□□ 0.37
DDX39B-204ENST00000418897 TTC21AQ8NDW8 1320 aa17.34■□□□□ 0.37
DDX39B-204ENST00000418897 USP47Q96K76 1375 aa17.34■□□□□ 0.37
DDX39B-204ENST00000418897 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
DDX39B-204ENST00000418897 SMIM5Q71RC9 77 aa17.32■□□□□ 0.36
DDX39B-204ENST00000418897 AMIGO3Q86WK7 504 aa17.32■□□□□ 0.36
DDX39B-204ENST00000418897 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
DDX39B-204ENST00000418897 C9orf131Q5VYM1 1079 aa17.31■□□□□ 0.36
DDX39B-204ENST00000418897 QRICH2Q9H0J4 1663 aa17.31■□□□□ 0.36
DDX39B-204ENST00000418897 PLEKHG2Q9H7P9 1386 aa17.3■□□□□ 0.36
DDX39B-204ENST00000418897 TGFB2P61812 414 aa17.3■□□□□ 0.36
DDX39B-204ENST00000418897 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
DDX39B-204ENST00000418897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.29■□□□□ 0.36
DDX39B-204ENST00000418897 AK7Q96M32 723 aa17.29■□□□□ 0.36
DDX39B-204ENST00000418897 KIAA1210Q9ULL0 1709 aa17.28■□□□□ 0.36
DDX39B-204ENST00000418897 NME9Q86XW9 330 aa17.28■□□□□ 0.36
DDX39B-204ENST00000418897 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
DDX39B-204ENST00000418897 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
DDX39B-204ENST00000418897 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
DDX39B-204ENST00000418897 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
DDX39B-204ENST00000418897 EVC2Q86UK5 1308 aa17.27■□□□□ 0.36
DDX39B-204ENST00000418897 FCHSD2O94868 740 aa17.27■□□□□ 0.36
DDX39B-204ENST00000418897 LTV1Q96GA3 475 aaPredicted RBP17.26■□□□□ 0.35
DDX39B-204ENST00000418897 C10orf71Q711Q0 1435 aa17.25■□□□□ 0.35
DDX39B-204ENST00000418897 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
DDX39B-204ENST00000418897 PHF14O94880 888 aa17.25■□□□□ 0.35
DDX39B-204ENST00000418897 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
DDX39B-204ENST00000418897 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
DDX39B-204ENST00000418897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.24■□□□□ 0.35
DDX39B-204ENST00000418897 MLLT1Q03111 559 aaPredicted RBP17.24■□□□□ 0.35
DDX39B-204ENST00000418897 IP6K1Q92551 441 aa17.23■□□□□ 0.35
DDX39B-204ENST00000418897 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
DDX39B-204ENST00000418897 KCPQ6ZWJ8 1503 aa17.22■□□□□ 0.35
DDX39B-204ENST00000418897 LTN1O94822 1766 aa17.22■□□□□ 0.35
DDX39B-204ENST00000418897 FOXN1O15353 648 aa17.21■□□□□ 0.35
DDX39B-204ENST00000418897 SSFA2P28290 1259 aa17.21■□□□□ 0.35
DDX39B-204ENST00000418897 CTCFP49711 727 aaPredicted RBP17.21■□□□□ 0.35
DDX39B-204ENST00000418897 AIDAQ96BJ3 306 aa17.21■□□□□ 0.35
DDX39B-204ENST00000418897 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
DDX39B-204ENST00000418897 MMP10P09238 476 aa17.2■□□□□ 0.34
DDX39B-204ENST00000418897 VEGFAP15692 232 aaPredicted RBP17.2■□□□□ 0.34
DDX39B-204ENST00000418897 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
DDX39B-204ENST00000418897 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
DDX39B-204ENST00000418897 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
DDX39B-204ENST00000418897 ABHD8Q96I13 439 aa17.19■□□□□ 0.34
DDX39B-204ENST00000418897 C5P01031 1676 aa17.19■□□□□ 0.34
DDX39B-204ENST00000418897 DPEP1P16444 411 aa17.18■□□□□ 0.34
DDX39B-204ENST00000418897 SMARCC1Q92922 1105 aaPredicted RBP17.18■□□□□ 0.34
DDX39B-204ENST00000418897 FBLN1P23142 703 aa17.17■□□□□ 0.34
DDX39B-204ENST00000418897 TAF1LQ8IZX4 1826 aa17.17■□□□□ 0.34
DDX39B-204ENST00000418897 MEGF6O75095 1541 aa17.16■□□□□ 0.34
DDX39B-204ENST00000418897 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
DDX39B-204ENST00000418897 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
DDX39B-204ENST00000418897 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
DDX39B-204ENST00000418897 MKRN1Q9UHC7 482 aaKnown RBP17.16■□□□□ 0.34
DDX39B-204ENST00000418897 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
DDX39B-204ENST00000418897 CREBZFQ9NS37 354 aa17.15■□□□□ 0.34
DDX39B-204ENST00000418897 PIM2Q9P1W9 311 aa17.15■□□□□ 0.34
DDX39B-204ENST00000418897 CD163L1Q9NR16 1453 aa17.15■□□□□ 0.34
DDX39B-204ENST00000418897 C4BP0C0L5 1744 aa17.14■□□□□ 0.33
DDX39B-204ENST00000418897 MON2Q7Z3U7 1717 aa17.14■□□□□ 0.33
DDX39B-204ENST00000418897 NBPF6Q5VWK0 638 aa17.14■□□□□ 0.33
DDX39B-204ENST00000418897 NLGN1Q8N2Q7 840 aa17.14■□□□□ 0.33
DDX39B-204ENST00000418897 NBPF4Q96M43 638 aa17.14■□□□□ 0.33
DDX39B-204ENST00000418897 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
DDX39B-204ENST00000418897 HOXC9P31274 260 aa17.13■□□□□ 0.33
DDX39B-204ENST00000418897 RGS19P49795 217 aa17.13■□□□□ 0.33
DDX39B-204ENST00000418897 DALRD3Q5D0E6 543 aaKnown RBP17.13■□□□□ 0.33
DDX39B-204ENST00000418897 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
DDX39B-204ENST00000418897 UBR3Q6ZT12 1888 aa17.12■□□□□ 0.33
DDX39B-204ENST00000418897 TMF1P82094 1093 aa17.12■□□□□ 0.33
DDX39B-204ENST00000418897 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
DDX39B-204ENST00000418897 LINC00116Q8NCU8 138 aa17.12■□□□□ 0.33
DDX39B-204ENST00000418897 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
DDX39B-204ENST00000418897 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
DDX39B-204ENST00000418897 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
DDX39B-204ENST00000418897 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
DDX39B-204ENST00000418897 GLTPD2A6NH11 291 aa17.11■□□□□ 0.33
DDX39B-204ENST00000418897 CCDC85CA6NKD9 419 aa17.11■□□□□ 0.33
DDX39B-204ENST00000418897 KCNA3P22001 575 aa17.11■□□□□ 0.33
DDX39B-204ENST00000418897 LBX1P52954 281 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms