RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 KRT28Q7Z3Y7 464 aa9.24□□□□□ -0.93
CPS1-202ENST00000417946 POLKQ9UBT6 870 aa9.24□□□□□ -0.93
CPS1-202ENST00000417946 COL22A1Q8NFW1 1626 aaPredicted RBP9.23□□□□□ -0.93
CPS1-202ENST00000417946 MTHFSP49914 203 aa9.23□□□□□ -0.93
CPS1-202ENST00000417946 CDAN1Q8IWY9 1227 aa9.23□□□□□ -0.93
CPS1-202ENST00000417946 COG3Q96JB2 828 aa9.23□□□□□ -0.93
CPS1-202ENST00000417946 TAOK2Q9UL54 1235 aa9.23□□□□□ -0.93
CPS1-202ENST00000417946 EMILIN1Q9Y6C2 1016 aa9.23□□□□□ -0.93
CPS1-202ENST00000417946 SPATA31A3Q5VYP0 1347 aa9.23□□□□□ -0.93
CPS1-202ENST00000417946 NPHP3Q7Z494 1330 aa9.23□□□□□ -0.93
CPS1-202ENST00000417946 PSME1Q06323 249 aa9.22□□□□□ -0.93
CPS1-202ENST00000417946 NUTM2GQ5VZR2 741 aa9.22□□□□□ -0.93
CPS1-202ENST00000417946 PHLPP1O60346 1717 aa9.22□□□□□ -0.93
CPS1-202ENST00000417946 RGPD5Q99666 1765 aa9.22□□□□□ -0.93
CPS1-202ENST00000417946 CAMTA1Q9Y6Y1 1673 aa9.21□□□□□ -0.93
CPS1-202ENST00000417946 NLRP6P59044 892 aa9.21□□□□□ -0.94
CPS1-202ENST00000417946 RRS1Q15050 365 aaKnown RBP9.21□□□□□ -0.94
CPS1-202ENST00000417946 MAP3K19Q56UN5 1328 aa9.21□□□□□ -0.94
CPS1-202ENST00000417946 LMO7Q8WWI1 1683 aa9.2□□□□□ -0.94
CPS1-202ENST00000417946 RGPD2P0DJD1 1756 aa9.2□□□□□ -0.94
CPS1-202ENST00000417946 TOM1O60784 492 aa9.2□□□□□ -0.94
CPS1-202ENST00000417946 ABTB2Q8N961 1025 aa9.2□□□□□ -0.94
CPS1-202ENST00000417946 ABCC6O95255 1503 aa9.2□□□□□ -0.94
CPS1-202ENST00000417946 FAM9BQ8IZU0 186 aa9.19□□□□□ -0.94
CPS1-202ENST00000417946 BOLA1Q9Y3E2 137 aa9.19□□□□□ -0.94
CPS1-202ENST00000417946 RTL1A6NKG5 1358 aa9.19□□□□□ -0.94
CPS1-202ENST00000417946 ARHGEF10O15013 1369 aa9.19□□□□□ -0.94
CPS1-202ENST00000417946 IL13P35225 146 aa9.18□□□□□ -0.94
CPS1-202ENST00000417946 FLT4P35916 1363 aa9.18□□□□□ -0.94
CPS1-202ENST00000417946 KIF24Q5T7B8 1368 aa9.18□□□□□ -0.94
CPS1-202ENST00000417946 YTHDC1Q96MU7 727 aaKnown RBP9.18□□□□□ -0.94
CPS1-202ENST00000417946 ADAMTS8Q9UP79 889 aa9.18□□□□□ -0.94
CPS1-202ENST00000417946 NCAPD2Q15021 1401 aa9.17□□□□□ -0.94
CPS1-202ENST00000417946 UBAP1LF5GYI3 381 aa9.17□□□□□ -0.94
CPS1-202ENST00000417946 RIOK3O14730 519 aaKnown RBP9.17□□□□□ -0.94
CPS1-202ENST00000417946 SOX12O15370 315 aa9.17□□□□□ -0.94
CPS1-202ENST00000417946 ILDR1Q86SU0 546 aaPredicted RBP9.17□□□□□ -0.94
CPS1-202ENST00000417946 FAM208AQ9UK61 1670 aaKnown RBP9.16□□□□□ -0.94
CPS1-202ENST00000417946 CPDO75976 1380 aa9.16□□□□□ -0.94
CPS1-202ENST00000417946 GCP02774 474 aa9.16□□□□□ -0.94
CPS1-202ENST00000417946 HOXC9P31274 260 aa9.16□□□□□ -0.94
CPS1-202ENST00000417946 EIF4A2Q14240 407 aaKnown RBP9.16□□□□□ -0.94
CPS1-202ENST00000417946 HSP90AB2PQ58FF8 381 aa9.16□□□□□ -0.94
CPS1-202ENST00000417946 ARHGEF25Q86VW2 580 aa9.16□□□□□ -0.94
CPS1-202ENST00000417946 CABLES1Q8TDN4 633 aa9.15□□□□□ -0.94
CPS1-202ENST00000417946 CFAP53Q96M91 514 aa9.15□□□□□ -0.94
CPS1-202ENST00000417946 DLG5Q8TDM6 1919 aa9.14□□□□□ -0.95
CPS1-202ENST00000417946 DIAPH1O60610 1272 aaKnown RBP9.14□□□□□ -0.95
CPS1-202ENST00000417946 KCNH5Q8NCM2 988 aa9.14□□□□□ -0.95
CPS1-202ENST00000417946 PLEKHF1Q96S99 279 aa9.14□□□□□ -0.95
CPS1-202ENST00000417946 KDRP35968 1356 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 KIAA0232Q92628 1395 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 IGSF1Q8N6C5 1336 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 SENP3-EIF4A1A0A087X0R7 540 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 PPM1GO15355 546 aaPredicted RBP9.13□□□□□ -0.95
CPS1-202ENST00000417946 EMP3P54852 163 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 LMOD2Q6P5Q4 547 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 CCDC146Q8IYE0 955 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 IP6K1Q92551 441 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 RSPH6AQ9H0K4 717 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 AXIN2Q9Y2T1 843 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 NRAPQ86VF7 1730 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 PLCH1Q4KWH8 1693 aa9.13□□□□□ -0.95
CPS1-202ENST00000417946 COL14A1Q05707 1796 aaKnown RBP9.12□□□□□ -0.95
CPS1-202ENST00000417946 ZBED9Q6R2W3 1325 aa9.12□□□□□ -0.95
CPS1-202ENST00000417946 ZNF521Q96K83 1311 aa9.12□□□□□ -0.95
CPS1-202ENST00000417946 HNRNPUQ00839 825 aaKnown RBP eCLIP9.12□□□□□ -0.95
CPS1-202ENST00000417946 WDR43Q15061 677 aaKnown RBP eCLIP9.12□□□□□ -0.95
CPS1-202ENST00000417946 AEBP1Q8IUX7 1158 aa9.12□□□□□ -0.95
CPS1-202ENST00000417946 ZNF710Q8N1W2 664 aa9.12□□□□□ -0.95
CPS1-202ENST00000417946 EFCAB3Q8N7B9 438 aa9.12□□□□□ -0.95
CPS1-202ENST00000417946 RIMBP2O15034 1052 aa9.11□□□□□ -0.95
CPS1-202ENST00000417946 U2AF1L5P0DN76 240 aaPredicted RBP9.11□□□□□ -0.95
CPS1-202ENST00000417946 PIP4K2BP78356 416 aa9.11□□□□□ -0.95
CPS1-202ENST00000417946 U2AF1Q01081 240 aaKnown RBP eCLIP9.11□□□□□ -0.95
CPS1-202ENST00000417946 COL5A2P05997 1499 aaPredicted RBP9.1□□□□□ -0.95
CPS1-202ENST00000417946 LRP6O75581 1613 aa9.1□□□□□ -0.95
CPS1-202ENST00000417946 U2SURPO15042 1029 aaKnown RBP9.1□□□□□ -0.95
CPS1-202ENST00000417946 AMPHP49418 695 aa9.1□□□□□ -0.95
CPS1-202ENST00000417946 ZC3H6P61129 1189 aaKnown RBP9.1□□□□□ -0.95
CPS1-202ENST00000417946 DPY19L2Q6NUT2 758 aa9.1□□□□□ -0.95
CPS1-202ENST00000417946 FBXO41Q8TF61 875 aa9.1□□□□□ -0.95
CPS1-202ENST00000417946 MARVELD3Q96A59 401 aa9.1□□□□□ -0.95
CPS1-202ENST00000417946 LRRC59Q96AG4 307 aaKnown RBP9.1□□□□□ -0.95
CPS1-202ENST00000417946 EYA1Q99502 592 aa9.1□□□□□ -0.95
CPS1-202ENST00000417946 WNK3Q9BYP7 1800 aa9.1□□□□□ -0.95
CPS1-202ENST00000417946 LRRC37A3O60309 1634 aa9.09□□□□□ -0.95
CPS1-202ENST00000417946 ERBB3P21860 1342 aa9.09□□□□□ -0.95
CPS1-202ENST00000417946 SHANK3Q9BYB0 1731 aa9.09□□□□□ -0.95
CPS1-202ENST00000417946 APAF1O14727 1248 aa9.09□□□□□ -0.95
CPS1-202ENST00000417946 CHRNA2Q15822 529 aa9.09□□□□□ -0.95
CPS1-202ENST00000417946 DOK7Q18PE1 504 aa9.09□□□□□ -0.95
CPS1-202ENST00000417946 RUNDC1Q96C34 613 aa9.09□□□□□ -0.95
CPS1-202ENST00000417946 PHACTR3Q96KR7 559 aa9.09□□□□□ -0.95
CPS1-202ENST00000417946 PKD1L3Q7Z443 1732 aa9.08□□□□□ -0.96
CPS1-202ENST00000417946 NWD2Q9ULI1 1742 aa9.08□□□□□ -0.96
CPS1-202ENST00000417946 FCHSD2O94868 740 aa9.08□□□□□ -0.96
CPS1-202ENST00000417946 HMOX1P09601 288 aa9.08□□□□□ -0.96
CPS1-202ENST00000417946 PRKAR2BP31323 418 aa9.08□□□□□ -0.96
CPS1-202ENST00000417946 NBPF6Q5VWK0 638 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms