RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 PCDH11XQ9BZA7 1347 aa19.29■□□□□ 0.68
SLC13A3-205ENST00000417157 PCDH11YQ9BZA8 1340 aa19.29■□□□□ 0.68
SLC13A3-205ENST00000417157 PLSCR1O15162 318 aa19.29■□□□□ 0.68
SLC13A3-205ENST00000417157 EIF4A2Q14240 407 aaKnown RBP19.29■□□□□ 0.68
SLC13A3-205ENST00000417157 SBF2Q86WG5 1849 aa19.29■□□□□ 0.68
SLC13A3-205ENST00000417157 NHSQ6T4R5 1651 aa19.29■□□□□ 0.68
SLC13A3-205ENST00000417157 CC2D1BQ5T0F9 858 aaKnown RBP19.28■□□□□ 0.68
SLC13A3-205ENST00000417157 EYA1Q99502 592 aa19.27■□□□□ 0.68
SLC13A3-205ENST00000417157 RREB1Q92766 1687 aa19.26■□□□□ 0.67
SLC13A3-205ENST00000417157 IGSF1Q8N6C5 1336 aa19.25■□□□□ 0.67
SLC13A3-205ENST00000417157 ZEB1P37275 1124 aaPredicted RBP19.25■□□□□ 0.67
SLC13A3-205ENST00000417157 NBPF14Q5TI25 921 aa19.25■□□□□ 0.67
SLC13A3-205ENST00000417157 ACSBG1Q96GR2 724 aa19.25■□□□□ 0.67
SLC13A3-205ENST00000417157 SPG7Q9UQ90 795 aa19.25■□□□□ 0.67
SLC13A3-205ENST00000417157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.24■□□□□ 0.67
SLC13A3-205ENST00000417157 SHANK3Q9BYB0 1731 aa19.23■□□□□ 0.67
SLC13A3-205ENST00000417157 PKD1L3Q7Z443 1732 aa19.22■□□□□ 0.67
SLC13A3-205ENST00000417157 KCNQ2O43526 872 aa19.22■□□□□ 0.67
SLC13A3-205ENST00000417157 MTHFSP49914 203 aa19.21■□□□□ 0.67
SLC13A3-205ENST00000417157 NUP188Q5SRE5 1749 aa19.21■□□□□ 0.67
SLC13A3-205ENST00000417157 PTF1AQ7RTS3 328 aa19.21■□□□□ 0.67
SLC13A3-205ENST00000417157 SYTL4Q96C24 671 aaPredicted RBP19.21■□□□□ 0.67
SLC13A3-205ENST00000417157 DOT1LQ8TEK3 1739 aa19.2■□□□□ 0.66
SLC13A3-205ENST00000417157 IL13P35225 146 aa19.18■□□□□ 0.66
SLC13A3-205ENST00000417157 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
SLC13A3-205ENST00000417157 TXNRD1Q16881 649 aa19.18■□□□□ 0.66
SLC13A3-205ENST00000417157 BTAF1O14981 1849 aa19.17■□□□□ 0.66
SLC13A3-205ENST00000417157 PSDA5PKW4 1024 aaPredicted RBP19.17■□□□□ 0.66
SLC13A3-205ENST00000417157 CYP27B1O15528 508 aa19.17■□□□□ 0.66
SLC13A3-205ENST00000417157 PRIM1P49642 420 aaKnown RBP19.17■□□□□ 0.66
SLC13A3-205ENST00000417157 R3HDM1Q15032 1099 aaKnown RBP19.17■□□□□ 0.66
SLC13A3-205ENST00000417157 KDRP35968 1356 aa19.17■□□□□ 0.66
SLC13A3-205ENST00000417157 DIAPH1O60610 1272 aaKnown RBP19.16■□□□□ 0.66
SLC13A3-205ENST00000417157 AMOTQ4VCS5 1084 aa19.16■□□□□ 0.66
SLC13A3-205ENST00000417157 PLEKHO1Q53GL0 409 aaPredicted RBP19.16■□□□□ 0.66
SLC13A3-205ENST00000417157 IFNL2Q8IZJ0 200 aa19.16■□□□□ 0.66
SLC13A3-205ENST00000417157 NKX1-1Q15270 411 aaPredicted RBP19.15■□□□□ 0.66
SLC13A3-205ENST00000417157 CFAP53Q96M91 514 aa19.15■□□□□ 0.66
SLC13A3-205ENST00000417157 HSP90AB1P08238 724 aaKnown RBP19.14■□□□□ 0.65
SLC13A3-205ENST00000417157 SLC27A3Q5K4L6 730 aa19.14■□□□□ 0.65
SLC13A3-205ENST00000417157 SULT6B1Q6IMI4 303 aa19.14■□□□□ 0.65
SLC13A3-205ENST00000417157 PHKG2P15735 406 aa19.13■□□□□ 0.65
SLC13A3-205ENST00000417157 HMGB2P26583 209 aaKnown RBP19.13■□□□□ 0.65
SLC13A3-205ENST00000417157 PROM2Q8N271 834 aa19.13■□□□□ 0.65
SLC13A3-205ENST00000417157 STK32BQ9NY57 414 aa19.13■□□□□ 0.65
SLC13A3-205ENST00000417157 AEBP1Q8IUX7 1158 aa19.12■□□□□ 0.65
SLC13A3-205ENST00000417157 COL3A1P02461 1466 aaPredicted RBP19.1■□□□□ 0.65
SLC13A3-205ENST00000417157 C1orf141Q5JVX7 400 aa19.1■□□□□ 0.65
SLC13A3-205ENST00000417157 ZNF530Q6P9A1 599 aaPredicted RBP19.09■□□□□ 0.65
SLC13A3-205ENST00000417157 MPRIPQ6WCQ1 1025 aa19.09■□□□□ 0.65
SLC13A3-205ENST00000417157 SMARCC1Q92922 1105 aaPredicted RBP19.09■□□□□ 0.65
SLC13A3-205ENST00000417157 DCAF5Q96JK2 942 aa19.09■□□□□ 0.65
SLC13A3-205ENST00000417157 ANO8Q9HCE9 1232 aaPredicted RBP19.09■□□□□ 0.65
SLC13A3-205ENST00000417157 LRP5O75197 1615 aa19.09■□□□□ 0.65
SLC13A3-205ENST00000417157 PPP2R1AP30153 589 aa19.08■□□□□ 0.64
SLC13A3-205ENST00000417157 TMOD3Q9NYL9 352 aa19.08■□□□□ 0.64
SLC13A3-205ENST00000417157 NUDCQ9Y266 331 aa19.08■□□□□ 0.64
SLC13A3-205ENST00000417157 TOGARAM1Q9Y4F4 1720 aa19.08■□□□□ 0.64
SLC13A3-205ENST00000417157 U2SURPO15042 1029 aaKnown RBP19.07■□□□□ 0.64
SLC13A3-205ENST00000417157 SLC15A2Q16348 729 aa19.07■□□□□ 0.64
SLC13A3-205ENST00000417157 KAT6BQ8WYB5 2073 aa19.07■□□□□ 0.64
SLC13A3-205ENST00000417157 PAPPAQ13219 1627 aa19.07■□□□□ 0.64
SLC13A3-205ENST00000417157 PALLDQ8WX93 1383 aa19.06■□□□□ 0.64
SLC13A3-205ENST00000417157 HMOX1P09601 288 aa19.06■□□□□ 0.64
SLC13A3-205ENST00000417157 CCNL1Q9UK58 526 aaPredicted RBP19.06■□□□□ 0.64
SLC13A3-205ENST00000417157 LY75O60449 1722 aa19.05■□□□□ 0.64
SLC13A3-205ENST00000417157 ERVV-2B6SEH9 535 aa19.05■□□□□ 0.64
SLC13A3-205ENST00000417157 PIGBQ92521 554 aa19.04■□□□□ 0.64
SLC13A3-205ENST00000417157 LRRC4BQ9NT99 713 aa19.04■□□□□ 0.64
SLC13A3-205ENST00000417157 DDX10Q13206 875 aaKnown RBP19.03■□□□□ 0.64
SLC13A3-205ENST00000417157 RALBP1Q15311 655 aa19.03■□□□□ 0.64
SLC13A3-205ENST00000417157 AKAP4Q5JQC9 854 aa19.03■□□□□ 0.64
SLC13A3-205ENST00000417157 ITGB4P16144 1822 aa19.02■□□□□ 0.63
SLC13A3-205ENST00000417157 KDM6AO15550 1401 aaPredicted RBP19.01■□□□□ 0.63
SLC13A3-205ENST00000417157 CABP4P57796 275 aa19.01■□□□□ 0.63
SLC13A3-205ENST00000417157 SPON1Q9HCB6 807 aa19■□□□□ 0.63
SLC13A3-205ENST00000417157 CASZ1Q86V15 1759 aa18.99■□□□□ 0.63
SLC13A3-205ENST00000417157 ZNF827Q17R98 1081 aa18.99■□□□□ 0.63
SLC13A3-205ENST00000417157 GAS2L2Q8NHY3 880 aa18.99■□□□□ 0.63
SLC13A3-205ENST00000417157 AKT1S1Q96B36 256 aa18.99■□□□□ 0.63
SLC13A3-205ENST00000417157 U2AF1L5P0DN76 240 aaPredicted RBP18.98■□□□□ 0.63
SLC13A3-205ENST00000417157 U2AF1Q01081 240 aaKnown RBP eCLIP18.98■□□□□ 0.63
SLC13A3-205ENST00000417157 TFCP2L1Q9NZI6 479 aa18.98■□□□□ 0.63
SLC13A3-205ENST00000417157 MTHFSDQ2M296 383 aaKnown RBP18.97■□□□□ 0.63
SLC13A3-205ENST00000417157 LOC102724428A0A0B4J2F2 783 aa18.96■□□□□ 0.63
SLC13A3-205ENST00000417157 KCNQ4P56696 695 aa18.96■□□□□ 0.63
SLC13A3-205ENST00000417157 SIK1P57059 783 aa18.96■□□□□ 0.63
SLC13A3-205ENST00000417157 C5P01031 1676 aa18.95■□□□□ 0.62
SLC13A3-205ENST00000417157 QSER1Q2KHR3 1735 aa18.95■□□□□ 0.62
SLC13A3-205ENST00000417157 FCHSD2O94868 740 aa18.95■□□□□ 0.62
SLC13A3-205ENST00000417157 PRKAR2BP31323 418 aa18.95■□□□□ 0.62
SLC13A3-205ENST00000417157 MTFR1LQ9H019 292 aa18.95■□□□□ 0.62
SLC13A3-205ENST00000417157 RSPH6AQ9H0K4 717 aa18.95■□□□□ 0.62
SLC13A3-205ENST00000417157 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
SLC13A3-205ENST00000417157 ASAP1Q9ULH1 1129 aa18.95■□□□□ 0.62
SLC13A3-205ENST00000417157 NEFMP07197 916 aa18.94■□□□□ 0.62
SLC13A3-205ENST00000417157 SLC16A10Q8TF71 515 aa18.94■□□□□ 0.62
SLC13A3-205ENST00000417157 PPP1R1BQ9UD71 204 aaPredicted RBP18.94■□□□□ 0.62
SLC13A3-205ENST00000417157 MRC1P22897 1456 aa18.94■□□□□ 0.62
SLC13A3-205ENST00000417157 MAP3K5Q99683 1374 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms