RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 ZBTB40Q9NUA8 1239 aa14□□□□□ -0.17
TRAPPC12-205ENST00000416918 MAP3K5Q99683 1374 aa13.99□□□□□ -0.17
TRAPPC12-205ENST00000416918 ITPRIPQ8IWB1 547 aa13.99□□□□□ -0.17
TRAPPC12-205ENST00000416918 ABCC6O95255 1503 aa13.99□□□□□ -0.17
TRAPPC12-205ENST00000416918 TAF7Q15545 349 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC12-205ENST00000416918 FAM161AQ3B820 660 aa13.98□□□□□ -0.17
TRAPPC12-205ENST00000416918 NUTM2GQ5VZR2 741 aa13.98□□□□□ -0.17
TRAPPC12-205ENST00000416918 C8orf58Q8NAV2 365 aa13.98□□□□□ -0.17
TRAPPC12-205ENST00000416918 THUMPD2Q9BTF0 503 aaKnown RBP13.98□□□□□ -0.17
TRAPPC12-205ENST00000416918 TSPYL4Q9UJ04 414 aa13.98□□□□□ -0.17
TRAPPC12-205ENST00000416918 OVOS2A0A0G2JMS6 1433 aa13.98□□□□□ -0.17
TRAPPC12-205ENST00000416918 NCAPD2Q15021 1401 aa13.98□□□□□ -0.17
TRAPPC12-205ENST00000416918 ABCC4O15439 1325 aa13.97□□□□□ -0.17
TRAPPC12-205ENST00000416918 FAM83GA6ND36 823 aa13.97□□□□□ -0.17
TRAPPC12-205ENST00000416918 EIF5BO60841 1220 aaKnown RBP13.97□□□□□ -0.17
TRAPPC12-205ENST00000416918 HOXB7P09629 217 aa13.97□□□□□ -0.17
TRAPPC12-205ENST00000416918 MARF1Q9Y4F3 1742 aaKnown RBP13.97□□□□□ -0.17
TRAPPC12-205ENST00000416918 LMTK3Q96Q04 1460 aa13.97□□□□□ -0.17
TRAPPC12-205ENST00000416918 IGHDP01880 384 aa13.96□□□□□ -0.17
TRAPPC12-205ENST00000416918 AKAP4Q5JQC9 854 aa13.96□□□□□ -0.17
TRAPPC12-205ENST00000416918 INTS3Q68E01 1043 aaKnown RBP13.96□□□□□ -0.17
TRAPPC12-205ENST00000416918 MCM10Q7L590 875 aa13.96□□□□□ -0.17
TRAPPC12-205ENST00000416918 TMEM57Q8N5G2 664 aa13.96□□□□□ -0.17
TRAPPC12-205ENST00000416918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRAPPC12-205ENST00000416918 PCDHB15Q9Y5E8 787 aa13.96□□□□□ -0.17
TRAPPC12-205ENST00000416918 DLG5Q8TDM6 1919 aa13.96□□□□□ -0.18
TRAPPC12-205ENST00000416918 DCTN1Q14203 1278 aa13.95□□□□□ -0.18
TRAPPC12-205ENST00000416918 CCDC30Q5VVM6 783 aa13.95□□□□□ -0.18
TRAPPC12-205ENST00000416918 TSPYL6Q8N831 410 aa13.95□□□□□ -0.18
TRAPPC12-205ENST00000416918 GCC1Q96CN9 775 aa13.95□□□□□ -0.18
TRAPPC12-205ENST00000416918 RBM33Q96EV2 1170 aaKnown RBP13.95□□□□□ -0.18
TRAPPC12-205ENST00000416918 STK31Q9BXU1 1019 aa13.95□□□□□ -0.18
TRAPPC12-205ENST00000416918 ZBTB7BO15156 539 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-205ENST00000416918 SMC5Q8IY18 1101 aa13.94□□□□□ -0.18
TRAPPC12-205ENST00000416918 CEMIPQ8WUJ3 1361 aa13.94□□□□□ -0.18
TRAPPC12-205ENST00000416918 TRPM3Q9HCF6 1732 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC12-205ENST00000416918 C1orf141Q5JVX7 400 aa13.93□□□□□ -0.18
TRAPPC12-205ENST00000416918 NBPF6Q5VWK0 638 aa13.93□□□□□ -0.18
TRAPPC12-205ENST00000416918 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
TRAPPC12-205ENST00000416918 ANKRD24Q8TF21 1146 aa13.93□□□□□ -0.18
TRAPPC12-205ENST00000416918 DDRGK1Q96HY6 314 aa13.93□□□□□ -0.18
TRAPPC12-205ENST00000416918 NBPF4Q96M43 638 aa13.93□□□□□ -0.18
TRAPPC12-205ENST00000416918 TNS3Q68CZ2 1445 aa13.92□□□□□ -0.18
TRAPPC12-205ENST00000416918 CCT4P50991 539 aaKnown RBP13.92□□□□□ -0.18
TRAPPC12-205ENST00000416918 LTV1Q96GA3 475 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC12-205ENST00000416918 CPDO75976 1380 aa13.92□□□□□ -0.18
TRAPPC12-205ENST00000416918 SPATA31A3Q5VYP0 1347 aa13.91□□□□□ -0.18
TRAPPC12-205ENST00000416918 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
TRAPPC12-205ENST00000416918 RPAP2Q8IXW5 612 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC12-205ENST00000416918 IL17REQ8NFR9 667 aa13.91□□□□□ -0.18
TRAPPC12-205ENST00000416918 IPO9Q96P70 1041 aaKnown RBP13.91□□□□□ -0.18
TRAPPC12-205ENST00000416918 ELL2O00472 640 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC12-205ENST00000416918 LTN1O94822 1766 aa13.9□□□□□ -0.18
TRAPPC12-205ENST00000416918 ALS2Q96Q42 1657 aa13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 HSPA2P54652 639 aa13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 TEFQ10587 303 aa13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 ZNF530Q6P9A1 599 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 RAPGEF4Q8WZA2 1011 aa13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 PDZRN3Q9UPQ7 1066 aa13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 SPG7Q9UQ90 795 aa13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 TNNQ9UQP3 1299 aa13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 LRRC37A3O60309 1634 aa13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 ERBB3P21860 1342 aa13.89□□□□□ -0.19
TRAPPC12-205ENST00000416918 HSP90AB1P08238 724 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-205ENST00000416918 RGS3P49796 1198 aa13.88□□□□□ -0.19
TRAPPC12-205ENST00000416918 UPF2Q9HAU5 1272 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-205ENST00000416918 SLAIN2Q9P270 581 aa13.88□□□□□ -0.19
TRAPPC12-205ENST00000416918 HDAC5Q9UQL6 1122 aa13.88□□□□□ -0.19
TRAPPC12-205ENST00000416918 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC12-205ENST00000416918 HMMRO75330 724 aa13.87□□□□□ -0.19
TRAPPC12-205ENST00000416918 NUCB1Q02818 461 aa13.87□□□□□ -0.19
TRAPPC12-205ENST00000416918 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
TRAPPC12-205ENST00000416918 SOS2Q07890 1332 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-205ENST00000416918 PXDNQ92626 1479 aa13.87□□□□□ -0.19
TRAPPC12-205ENST00000416918 CAMTA1Q9Y6Y1 1673 aa13.86□□□□□ -0.19
TRAPPC12-205ENST00000416918 GNAI3P08754 354 aa13.86□□□□□ -0.19
TRAPPC12-205ENST00000416918 TATP17735 454 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC12-205ENST00000416918 XPCQ01831 940 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC12-205ENST00000416918 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC12-205ENST00000416918 RNMTO43148 476 aaKnown RBP13.85□□□□□ -0.19
TRAPPC12-205ENST00000416918 MYT1Q01538 1121 aa13.85□□□□□ -0.19
TRAPPC12-205ENST00000416918 C8orf34Q49A92 452 aa13.85□□□□□ -0.19
TRAPPC12-205ENST00000416918 BRINP3Q76B58 766 aa13.85□□□□□ -0.19
TRAPPC12-205ENST00000416918 CACNA1FO60840 1977 aa13.84□□□□□ -0.19
TRAPPC12-205ENST00000416918 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
TRAPPC12-205ENST00000416918 FAM208AQ9UK61 1670 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-205ENST00000416918 BTBD11A6QL63 1104 aa13.83□□□□□ -0.2
TRAPPC12-205ENST00000416918 EIF4A1P60842 406 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-205ENST00000416918 CHD1LQ86WJ1 897 aa13.83□□□□□ -0.2
TRAPPC12-205ENST00000416918 ANKRD44Q8N8A2 993 aa13.83□□□□□ -0.2
TRAPPC12-205ENST00000416918 STRCP1A6NGW2 1772 aa13.83□□□□□ -0.2
TRAPPC12-205ENST00000416918 PXDNLA1KZ92 1463 aa13.82□□□□□ -0.2
TRAPPC12-205ENST00000416918 ZC3H6P61129 1189 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-205ENST00000416918 FLIIQ13045 1269 aa13.82□□□□□ -0.2
TRAPPC12-205ENST00000416918 HDGFL1Q5TGJ6 251 aa13.82□□□□□ -0.2
TRAPPC12-205ENST00000416918 IFNL2Q8IZJ0 200 aa13.82□□□□□ -0.2
TRAPPC12-205ENST00000416918 USHBP1Q8N6Y0 703 aa13.82□□□□□ -0.2
TRAPPC12-205ENST00000416918 LRRC59Q96AG4 307 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-205ENST00000416918 DCTPP1Q9H773 170 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms