RNA–Protein interactions for RNA: ENST00000416426.6

MSI2-203, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-203ENST00000416426 PDE4AP27815 886 aa23.3■■□□□ 1.32
MSI2-203ENST00000416426 BACH2Q9BYV9 841 aa23.3■■□□□ 1.32
MSI2-203ENST00000416426 DDX19BQ9UMR2 479 aa23.3■■□□□ 1.32
MSI2-203ENST00000416426 KIAA0232Q92628 1395 aa23.3■■□□□ 1.32
MSI2-203ENST00000416426 USP19O94966 1318 aa23.29■■□□□ 1.32
MSI2-203ENST00000416426 MCM10Q7L590 875 aa23.29■■□□□ 1.32
MSI2-203ENST00000416426 ALS2Q96Q42 1657 aa23.29■■□□□ 1.32
MSI2-203ENST00000416426 KRT28Q7Z3Y7 464 aa23.27■■□□□ 1.32
MSI2-203ENST00000416426 TMEM57Q8N5G2 664 aa23.26■■□□□ 1.31
MSI2-203ENST00000416426 HAP1P54257 671 aaPredicted RBP23.25■■□□□ 1.31
MSI2-203ENST00000416426 RTF1Q92541 710 aaKnown RBP23.25■■□□□ 1.31
MSI2-203ENST00000416426 RWDD1Q9H446 243 aaPredicted RBP23.25■■□□□ 1.31
MSI2-203ENST00000416426 ATF3P18847 181 aa23.24■■□□□ 1.31
MSI2-203ENST00000416426 ARHGEF25Q86VW2 580 aa23.24■■□□□ 1.31
MSI2-203ENST00000416426 ITPRIPQ8IWB1 547 aa23.24■■□□□ 1.31
MSI2-203ENST00000416426 NCAPD2Q15021 1401 aa23.23■■□□□ 1.31
MSI2-203ENST00000416426 ELL2O00472 640 aaPredicted RBP23.23■■□□□ 1.31
MSI2-203ENST00000416426 GCP02774 474 aa23.23■■□□□ 1.31
MSI2-203ENST00000416426 LTV1Q96GA3 475 aaPredicted RBP23.23■■□□□ 1.31
MSI2-203ENST00000416426 MSH6P52701 1360 aa23.23■■□□□ 1.31
MSI2-203ENST00000416426 XPCQ01831 940 aaPredicted RBP23.22■■□□□ 1.31
MSI2-203ENST00000416426 ZBTB40Q9NUA8 1239 aa23.22■■□□□ 1.31
MSI2-203ENST00000416426 XIRP1Q702N8 1843 aaKnown RBP23.22■■□□□ 1.31
MSI2-203ENST00000416426 ABCC4O15439 1325 aa23.21■■□□□ 1.31
MSI2-203ENST00000416426 CAMTA1Q9Y6Y1 1673 aa23.21■■□□□ 1.31
MSI2-203ENST00000416426 MAP3K5Q99683 1374 aa23.21■■□□□ 1.31
MSI2-203ENST00000416426 RGPD2P0DJD1 1756 aa23.21■■□□□ 1.31
MSI2-203ENST00000416426 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
MSI2-203ENST00000416426 HDAC1Q13547 482 aaPredicted RBP23.19■■□□□ 1.3
MSI2-203ENST00000416426 NBPF6Q5VWK0 638 aa23.19■■□□□ 1.3
MSI2-203ENST00000416426 CADPS2Q86UW7 1296 aa23.19■■□□□ 1.3
MSI2-203ENST00000416426 NBPF4Q96M43 638 aa23.19■■□□□ 1.3
MSI2-203ENST00000416426 API5Q9BZZ5 524 aaKnown RBP23.19■■□□□ 1.3
MSI2-203ENST00000416426 MED1Q15648 1581 aaPredicted RBP23.19■■□□□ 1.3
MSI2-203ENST00000416426 MSH5O43196 834 aa23.18■■□□□ 1.3
MSI2-203ENST00000416426 CHMP4BQ9H444 224 aaKnown RBP23.17■■□□□ 1.3
MSI2-203ENST00000416426 BABAM1Q9NWV8 329 aa23.16■■□□□ 1.3
MSI2-203ENST00000416426 RGS3P49796 1198 aa23.16■■□□□ 1.3
MSI2-203ENST00000416426 KRT24Q2M2I5 525 aa23.16■■□□□ 1.3
MSI2-203ENST00000416426 FAM161AQ3B820 660 aa23.16■■□□□ 1.3
MSI2-203ENST00000416426 USHBP1Q8N6Y0 703 aa23.16■■□□□ 1.3
MSI2-203ENST00000416426 TSPYL4Q9UJ04 414 aa23.16■■□□□ 1.3
MSI2-203ENST00000416426 LMO7Q8WWI1 1683 aa23.15■■□□□ 1.3
MSI2-203ENST00000416426 ZBTB7BO15156 539 aaPredicted RBP23.14■■□□□ 1.3
MSI2-203ENST00000416426 VIRMAQ69YN4 1812 aaKnown RBP23.14■■□□□ 1.29
MSI2-203ENST00000416426 IL17REQ8NFR9 667 aa23.13■■□□□ 1.29
MSI2-203ENST00000416426 PDZRN3Q9UPQ7 1066 aa23.13■■□□□ 1.29
MSI2-203ENST00000416426 ANP32AP39687 249 aaKnown RBP23.13■■□□□ 1.29
MSI2-203ENST00000416426 C8orf34Q49A92 452 aa23.13■■□□□ 1.29
MSI2-203ENST00000416426 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
MSI2-203ENST00000416426 RGS12O14924 1447 aa23.13■■□□□ 1.29
MSI2-203ENST00000416426 NPHP3Q7Z494 1330 aa23.12■■□□□ 1.29
MSI2-203ENST00000416426 PXDNQ92626 1479 aa23.12■■□□□ 1.29
MSI2-203ENST00000416426 MIS18AQ9NYP9 233 aa23.12■■□□□ 1.29
MSI2-203ENST00000416426 CEMIPQ8WUJ3 1361 aa23.12■■□□□ 1.29
MSI2-203ENST00000416426 SOS1Q07889 1333 aaPredicted RBP23.12■■□□□ 1.29
MSI2-203ENST00000416426 CRYBG1Q9Y4K1 1723 aa23.11■■□□□ 1.29
MSI2-203ENST00000416426 RGPD5Q99666 1765 aa23.11■■□□□ 1.29
MSI2-203ENST00000416426 ZBTB7CA1YPR0 619 aa23.11■■□□□ 1.29
MSI2-203ENST00000416426 PTPRCP08575 1304 aa23.1■■□□□ 1.29
MSI2-203ENST00000416426 TNS3Q68CZ2 1445 aa23.1■■□□□ 1.29
MSI2-203ENST00000416426 SMC5Q8IY18 1101 aa23.1■■□□□ 1.29
MSI2-203ENST00000416426 ANKRD24Q8TF21 1146 aa23.1■■□□□ 1.29
MSI2-203ENST00000416426 LRRC59Q96AG4 307 aaKnown RBP23.1■■□□□ 1.29
MSI2-203ENST00000416426 COL18A1P39060 1754 aa23.1■■□□□ 1.29
MSI2-203ENST00000416426 ABCC6O95255 1503 aa23.09■■□□□ 1.29
MSI2-203ENST00000416426 TAF7Q15545 349 aaPredicted RBP23.09■■□□□ 1.29
MSI2-203ENST00000416426 INTS3Q68E01 1043 aaKnown RBP23.09■■□□□ 1.29
MSI2-203ENST00000416426 FAM208AQ9UK61 1670 aaKnown RBP23.08■■□□□ 1.29
MSI2-203ENST00000416426 AXIN2Q9Y2T1 843 aa23.08■■□□□ 1.28
MSI2-203ENST00000416426 UBAP1LF5GYI3 381 aa23.07■■□□□ 1.28
MSI2-203ENST00000416426 AMOTQ4VCS5 1084 aa23.07■■□□□ 1.28
MSI2-203ENST00000416426 PLEKHO1Q53GL0 409 aaPredicted RBP23.06■■□□□ 1.28
MSI2-203ENST00000416426 IPO9Q96P70 1041 aaKnown RBP23.06■■□□□ 1.28
MSI2-203ENST00000416426 KDM3BQ7LBC6 1761 aa23.06■■□□□ 1.28
MSI2-203ENST00000416426 OVOS2A0A0G2JMS6 1433 aa23.05■■□□□ 1.28
MSI2-203ENST00000416426 DDX17Q92841 729 aaKnown RBP23.05■■□□□ 1.28
MSI2-203ENST00000416426 CACNA1FO60840 1977 aa23.05■■□□□ 1.28
MSI2-203ENST00000416426 AKAP4Q5JQC9 854 aa23.05■■□□□ 1.28
MSI2-203ENST00000416426 SPATA31A3Q5VYP0 1347 aa23.04■■□□□ 1.28
MSI2-203ENST00000416426 ERBB3P21860 1342 aa23.04■■□□□ 1.28
MSI2-203ENST00000416426 SLC4A2P04920 1241 aa23.02■■□□□ 1.28
MSI2-203ENST00000416426 ADAMTS7Q9UKP4 1686 aa23.02■■□□□ 1.28
MSI2-203ENST00000416426 ZC3H6P61129 1189 aaKnown RBP23.02■■□□□ 1.28
MSI2-203ENST00000416426 ZNF530Q6P9A1 599 aaPredicted RBP23.02■■□□□ 1.28
MSI2-203ENST00000416426 BRINP3Q76B58 766 aa23.01■■□□□ 1.27
MSI2-203ENST00000416426 PLEKHG5O94827 1062 aa23■■□□□ 1.27
MSI2-203ENST00000416426 CPDO75976 1380 aa22.99■■□□□ 1.27
MSI2-203ENST00000416426 CCDC30Q5VVM6 783 aa22.99■■□□□ 1.27
MSI2-203ENST00000416426 PLEKHG2Q9H7P9 1386 aa22.99■■□□□ 1.27
MSI2-203ENST00000416426 LGR6Q9HBX8 967 aa22.99■■□□□ 1.27
MSI2-203ENST00000416426 NUCB1Q02818 461 aa22.98■■□□□ 1.27
MSI2-203ENST00000416426 NPM2Q86SE8 214 aaKnown RBP22.98■■□□□ 1.27
MSI2-203ENST00000416426 GCC1Q96CN9 775 aa22.98■■□□□ 1.27
MSI2-203ENST00000416426 STK31Q9BXU1 1019 aa22.98■■□□□ 1.27
MSI2-203ENST00000416426 SIPA1L3O60292 1781 aaPredicted RBP22.98■■□□□ 1.27
MSI2-203ENST00000416426 N4BP2Q86UW6 1770 aaPredicted RBP22.97■■□□□ 1.27
MSI2-203ENST00000416426 G2E3Q7L622 706 aa22.97■■□□□ 1.27
MSI2-203ENST00000416426 SIRT2Q8IXJ6 389 aa22.97■■□□□ 1.27
MSI2-203ENST00000416426 PIP4K2BP78356 416 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms