RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 PPP1R1BQ9UD71 204 aaPredicted RBP21.58■■□□□ 1.05
ACTB-202ENST00000414620 HSP90AB2PQ58FF8 381 aa21.57■■□□□ 1.04
ACTB-202ENST00000414620 FLT4P35916 1363 aa21.57■■□□□ 1.04
ACTB-202ENST00000414620 LY75O60449 1722 aa21.57■■□□□ 1.04
ACTB-202ENST00000414620 TUBGCP6Q96RT7 1819 aa21.57■■□□□ 1.04
ACTB-202ENST00000414620 INSRP06213 1382 aa21.56■■□□□ 1.04
ACTB-202ENST00000414620 ZBTB7AO95365 584 aa21.55■■□□□ 1.04
ACTB-202ENST00000414620 SLC15A2Q16348 729 aa21.55■■□□□ 1.04
ACTB-202ENST00000414620 ZCRB1Q8TBF4 217 aaKnown RBP21.55■■□□□ 1.04
ACTB-202ENST00000414620 SYTL4Q96C24 671 aaPredicted RBP21.55■■□□□ 1.04
ACTB-202ENST00000414620 EMILIN1Q9Y6C2 1016 aa21.55■■□□□ 1.04
ACTB-202ENST00000414620 HSPA5P11021 654 aaKnown RBP21.54■■□□□ 1.04
ACTB-202ENST00000414620 QSER1Q2KHR3 1735 aa21.52■■□□□ 1.04
ACTB-202ENST00000414620 PKD1L3Q7Z443 1732 aa21.52■■□□□ 1.04
ACTB-202ENST00000414620 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.04
ACTB-202ENST00000414620 EIF4G2P78344 907 aaKnown RBP eCLIP21.52■■□□□ 1.04
ACTB-202ENST00000414620 RAPGEF4Q8WZA2 1011 aa21.52■■□□□ 1.04
ACTB-202ENST00000414620 KIF24Q5T7B8 1368 aa21.51■■□□□ 1.03
ACTB-202ENST00000414620 ITGB4P16144 1822 aa21.51■■□□□ 1.03
ACTB-202ENST00000414620 PRIM1P49642 420 aaKnown RBP21.51■■□□□ 1.03
ACTB-202ENST00000414620 LRRC4BQ9NT99 713 aa21.51■■□□□ 1.03
ACTB-202ENST00000414620 ATF5Q9Y2D1 282 aaPredicted RBP21.51■■□□□ 1.03
ACTB-202ENST00000414620 TOGARAM1Q9Y4F4 1720 aa21.51■■□□□ 1.03
ACTB-202ENST00000414620 CGNL1Q0VF96 1302 aa21.51■■□□□ 1.03
ACTB-202ENST00000414620 NSD2O96028 1365 aa21.5■■□□□ 1.03
ACTB-202ENST00000414620 TATP17735 454 aaPredicted RBP21.5■■□□□ 1.03
ACTB-202ENST00000414620 ZNF827Q17R98 1081 aa21.5■■□□□ 1.03
ACTB-202ENST00000414620 KCNQ4P56696 695 aa21.48■■□□□ 1.03
ACTB-202ENST00000414620 TNNT2P45379 298 aaPredicted RBP21.46■■□□□ 1.03
ACTB-202ENST00000414620 PTGER2P43116 358 aa21.45■■□□□ 1.02
ACTB-202ENST00000414620 PCDH11XQ9BZA7 1347 aa21.45■■□□□ 1.02
ACTB-202ENST00000414620 PCDH11YQ9BZA8 1340 aa21.45■■□□□ 1.02
ACTB-202ENST00000414620 C5P01031 1676 aa21.44■■□□□ 1.02
ACTB-202ENST00000414620 TAF1LQ8IZX4 1826 aa21.44■■□□□ 1.02
ACTB-202ENST00000414620 SLC27A3Q5K4L6 730 aa21.43■■□□□ 1.02
ACTB-202ENST00000414620 MTFR1LQ9H019 292 aa21.43■■□□□ 1.02
ACTB-202ENST00000414620 PANK3Q9H999 370 aa21.43■■□□□ 1.02
ACTB-202ENST00000414620 NCAPD2Q15021 1401 aa21.43■■□□□ 1.02
ACTB-202ENST00000414620 WASHC2AQ641Q2 1341 aa21.42■■□□□ 1.02
ACTB-202ENST00000414620 AKT1S1Q96B36 256 aa21.42■■□□□ 1.02
ACTB-202ENST00000414620 POLKQ9UBT6 870 aa21.42■■□□□ 1.02
ACTB-202ENST00000414620 CYP27B1O15528 508 aa21.4■■□□□ 1.02
ACTB-202ENST00000414620 CCNL1Q9UK58 526 aaPredicted RBP21.4■■□□□ 1.02
ACTB-202ENST00000414620 COL24A1Q17RW2 1714 aa21.39■■□□□ 1.01
ACTB-202ENST00000414620 EYA1Q99502 592 aa21.39■■□□□ 1.01
ACTB-202ENST00000414620 PNPLA7Q6ZV29 1317 aa21.38■■□□□ 1.01
ACTB-202ENST00000414620 SGIP1Q9BQI5 828 aa21.37■■□□□ 1.01
ACTB-202ENST00000414620 FHDC1Q9C0D6 1143 aaPredicted RBP21.37■■□□□ 1.01
ACTB-202ENST00000414620 EIF4A2Q14240 407 aaKnown RBP21.36■■□□□ 1.01
ACTB-202ENST00000414620 MPRIPQ6WCQ1 1025 aa21.36■■□□□ 1.01
ACTB-202ENST00000414620 TFCP2L1Q9NZI6 479 aa21.36■■□□□ 1.01
ACTB-202ENST00000414620 DCAF8L1A6NGE4 600 aa21.35■■□□□ 1.01
ACTB-202ENST00000414620 PALLDQ8WX93 1383 aa21.35■■□□□ 1.01
ACTB-202ENST00000414620 SPG7Q9UQ90 795 aa21.34■■□□□ 1.01
ACTB-202ENST00000414620 C4BP0C0L5 1744 aa21.33■■□□□ 1.01
ACTB-202ENST00000414620 ARXQ96QS3 562 aa21.33■■□□□ 1.01
ACTB-202ENST00000414620 SYT17Q9BSW7 474 aa21.32■■□□□ 1
ACTB-202ENST00000414620 MORC1Q86VD1 984 aa21.31■■□□□ 1
ACTB-202ENST00000414620 KLHL34Q8N239 644 aa21.31■■□□□ 1
ACTB-202ENST00000414620 UBR3Q6ZT12 1888 aa21.3■■□□□ 1
ACTB-202ENST00000414620 MSH5O43196 834 aa21.3■■□□□ 1
ACTB-202ENST00000414620 YY1P25490 414 aa21.3■■□□□ 1
ACTB-202ENST00000414620 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
ACTB-202ENST00000414620 SLC16A10Q8TF71 515 aa21.29■■□□□ 1
ACTB-202ENST00000414620 IGSF1Q8N6C5 1336 aa21.29■■□□□ 1
ACTB-202ENST00000414620 CHD4Q14839 1912 aa21.28■■□□□ 1
ACTB-202ENST00000414620 NKX1-1Q15270 411 aaPredicted RBP21.28■■□□□ 1
ACTB-202ENST00000414620 PIGBQ92521 554 aa21.28■■□□□ 1
ACTB-202ENST00000414620 KNSTRNQ9Y448 316 aa21.28■■□□□ 1
ACTB-202ENST00000414620 PHKG2P15735 406 aa21.27■■□□□ 1
ACTB-202ENST00000414620 POLD1P28340 1107 aa21.27■■□□□ 1
ACTB-202ENST00000414620 COL23A1Q86Y22 540 aaPredicted RBP21.27■■□□□ 1
ACTB-202ENST00000414620 IFNL2Q8IZJ0 200 aa21.27■■□□□ 1
ACTB-202ENST00000414620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.26■□□□□ 0.99
ACTB-202ENST00000414620 VIRMAQ69YN4 1812 aaKnown RBP21.26■□□□□ 0.99
ACTB-202ENST00000414620 SMARCC1Q92922 1105 aaPredicted RBP21.25■□□□□ 0.99
ACTB-202ENST00000414620 TMOD3Q9NYL9 352 aa21.25■□□□□ 0.99
ACTB-202ENST00000414620 MSL1Q68DK7 614 aa21.24■□□□□ 0.99
ACTB-202ENST00000414620 MAP3K5Q99683 1374 aa21.23■□□□□ 0.99
ACTB-202ENST00000414620 AEBP1Q8IUX7 1158 aa21.23■□□□□ 0.99
ACTB-202ENST00000414620 AMER1Q5JTC6 1135 aaPredicted RBP21.22■□□□□ 0.99
ACTB-202ENST00000414620 SMIM5Q71RC9 77 aa21.21■□□□□ 0.99
ACTB-202ENST00000414620 AK7Q96M32 723 aa21.21■□□□□ 0.99
ACTB-202ENST00000414620 ASAP1Q9ULH1 1129 aa21.21■□□□□ 0.99
ACTB-202ENST00000414620 LOC102724428A0A0B4J2F2 783 aa21.2■□□□□ 0.98
ACTB-202ENST00000414620 PHF14O94880 888 aa21.2■□□□□ 0.98
ACTB-202ENST00000414620 SIK1P57059 783 aa21.2■□□□□ 0.98
ACTB-202ENST00000414620 AMIGO3Q86WK7 504 aa21.2■□□□□ 0.98
ACTB-202ENST00000414620 PLEKHG2Q9H7P9 1386 aa21.2■□□□□ 0.98
ACTB-202ENST00000414620 SCN11AQ9UI33 1791 aa21.2■□□□□ 0.98
ACTB-202ENST00000414620 COL5A3P25940 1745 aaPredicted RBP21.19■□□□□ 0.98
ACTB-202ENST00000414620 PLEKHO1Q53GL0 409 aaPredicted RBP21.19■□□□□ 0.98
ACTB-202ENST00000414620 ZNF530Q6P9A1 599 aaPredicted RBP21.19■□□□□ 0.98
ACTB-202ENST00000414620 LINC00116Q8NCU8 138 aa21.19■□□□□ 0.98
ACTB-202ENST00000414620 KDM6AO15550 1401 aaPredicted RBP21.19■□□□□ 0.98
ACTB-202ENST00000414620 SULT6B1Q6IMI4 303 aa21.18■□□□□ 0.98
ACTB-202ENST00000414620 NLGN2Q8NFZ4 835 aa21.18■□□□□ 0.98
ACTB-202ENST00000414620 CNGB1Q14028 1251 aaPredicted RBP21.17■□□□□ 0.98
ACTB-202ENST00000414620 CC2D1BQ5T0F9 858 aaKnown RBP21.17■□□□□ 0.98
ACTB-202ENST00000414620 PELP1Q8IZL8 1130 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms