RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 DIAPH1O60610 1272 aaKnown RBP19.82■□□□□ 0.76
CHD1-202ENST00000414220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.82■□□□□ 0.764e-8■■■□□ 18.7
CHD1-202ENST00000414220 MEGF6O75095 1541 aa19.81■□□□□ 0.76
CHD1-202ENST00000414220 IGSF1Q8N6C5 1336 aa19.81■□□□□ 0.76
CHD1-202ENST00000414220 DDX10Q13206 875 aaKnown RBP19.81■□□□□ 0.76
CHD1-202ENST00000414220 EP400Q96L91 3159 aa19.81■□□□□ 0.76
CHD1-202ENST00000414220 ACSBG1Q96GR2 724 aa19.8■□□□□ 0.76
CHD1-202ENST00000414220 PLEKHG2Q9H7P9 1386 aa19.8■□□□□ 0.76
CHD1-202ENST00000414220 PLSCR1O15162 318 aa19.79■□□□□ 0.76
CHD1-202ENST00000414220 IL13P35225 146 aa19.79■□□□□ 0.76
CHD1-202ENST00000414220 PLEKHO1Q53GL0 409 aaPredicted RBP19.79■□□□□ 0.76
CHD1-202ENST00000414220 NCAPD2Q15021 1401 aa19.78■□□□□ 0.76
CHD1-202ENST00000414220 RGPD2P0DJD1 1756 aa19.78■□□□□ 0.76
CHD1-202ENST00000414220 EZH2Q15910 746 aaKnown RBP19.78■□□□□ 0.76
CHD1-202ENST00000414220 AMOTQ4VCS5 1084 aa19.78■□□□□ 0.76
CHD1-202ENST00000414220 SYTL4Q96C24 671 aaPredicted RBP19.78■□□□□ 0.76
CHD1-202ENST00000414220 CAMKK2Q96RR4 588 aa19.78■□□□□ 0.76
CHD1-202ENST00000414220 SULT6B1Q6IMI4 303 aa19.77■□□□□ 0.76
CHD1-202ENST00000414220 IFNL2Q8IZJ0 200 aa19.77■□□□□ 0.76
CHD1-202ENST00000414220 NUDCQ9Y266 331 aa19.77■□□□□ 0.76
CHD1-202ENST00000414220 NBPF14Q5TI25 921 aa19.76■□□□□ 0.75
CHD1-202ENST00000414220 KCNQ2O43526 872 aa19.75■□□□□ 0.75
CHD1-202ENST00000414220 PPP2R1AP30153 589 aa19.75■□□□□ 0.75
CHD1-202ENST00000414220 HSP90AB1P08238 724 aaKnown RBP19.74■□□□□ 0.75
CHD1-202ENST00000414220 RALBP1Q15311 655 aa19.74■□□□□ 0.75
CHD1-202ENST00000414220 U2SURPO15042 1029 aaKnown RBP19.73■□□□□ 0.75
CHD1-202ENST00000414220 PRIM1P49642 420 aaKnown RBP19.73■□□□□ 0.75
CHD1-202ENST00000414220 CYP27B1O15528 508 aa19.72■□□□□ 0.75
CHD1-202ENST00000414220 HMGB2P26583 209 aaKnown RBP19.72■□□□□ 0.75
CHD1-202ENST00000414220 C1orf141Q5JVX7 400 aa19.72■□□□□ 0.75
CHD1-202ENST00000414220 TNS1Q9HBL0 1735 aaKnown RBP19.72■□□□□ 0.75
CHD1-202ENST00000414220 ZNF316A6NFI3 1004 aaPredicted RBP19.7■□□□□ 0.74
CHD1-202ENST00000414220 HMOX1P09601 288 aa19.7■□□□□ 0.74
CHD1-202ENST00000414220 PHKG2P15735 406 aa19.7■□□□□ 0.74
CHD1-202ENST00000414220 NKX1-1Q15270 411 aaPredicted RBP19.7■□□□□ 0.74
CHD1-202ENST00000414220 PTF1AQ7RTS3 328 aa19.7■□□□□ 0.74
CHD1-202ENST00000414220 AEBP1Q8IUX7 1158 aa19.7■□□□□ 0.74
CHD1-202ENST00000414220 KDRP35968 1356 aa19.7■□□□□ 0.74
CHD1-202ENST00000414220 TXNRD1Q16881 649 aa19.69■□□□□ 0.74
CHD1-202ENST00000414220 ZNF530Q6P9A1 599 aaPredicted RBP19.69■□□□□ 0.74
CHD1-202ENST00000414220 SBF2Q86WG5 1849 aa19.69■□□□□ 0.74
CHD1-202ENST00000414220 KAT6BQ8WYB5 2073 aa19.67■□□□□ 0.74
CHD1-202ENST00000414220 MPRIPQ6WCQ1 1025 aa19.67■□□□□ 0.74
CHD1-202ENST00000414220 NHSQ6T4R5 1651 aa19.67■□□□□ 0.74
CHD1-202ENST00000414220 DCAF5Q96JK2 942 aa19.66■□□□□ 0.74
CHD1-202ENST00000414220 NEFMP07197 916 aa19.65■□□□□ 0.74
CHD1-202ENST00000414220 U2AF1L5P0DN76 240 aaPredicted RBP19.65■□□□□ 0.74
CHD1-202ENST00000414220 U2AF1Q01081 240 aaKnown RBP eCLIP19.65■□□□□ 0.74
CHD1-202ENST00000414220 SLC27A3Q5K4L6 730 aa19.65■□□□□ 0.74
CHD1-202ENST00000414220 SMARCC1Q92922 1105 aaPredicted RBP19.65■□□□□ 0.74
CHD1-202ENST00000414220 TMOD3Q9NYL9 352 aa19.65■□□□□ 0.74
CHD1-202ENST00000414220 PKD1L3Q7Z443 1732 aa19.65■□□□□ 0.74
CHD1-202ENST00000414220 ERVV-2B6SEH9 535 aa19.64■□□□□ 0.73
CHD1-202ENST00000414220 AKAP4Q5JQC9 854 aa19.64■□□□□ 0.73
CHD1-202ENST00000414220 R3HDM1Q15032 1099 aaKnown RBP19.63■□□□□ 0.73
CHD1-202ENST00000414220 PNNQ9H307 717 aaKnown RBP19.63■□□□□ 0.73
CHD1-202ENST00000414220 STK32BQ9NY57 414 aa19.63■□□□□ 0.73
CHD1-202ENST00000414220 SHANK3Q9BYB0 1731 aa19.62■□□□□ 0.73
CHD1-202ENST00000414220 PSDA5PKW4 1024 aaPredicted RBP19.62■□□□□ 0.73
CHD1-202ENST00000414220 PROM2Q8N271 834 aa19.62■□□□□ 0.73
CHD1-202ENST00000414220 GAS2L2Q8NHY3 880 aa19.62■□□□□ 0.73
CHD1-202ENST00000414220 RGPD3A6NKT7 1758 aaPredicted RBP19.62■□□□□ 0.73
CHD1-202ENST00000414220 RGPD4Q7Z3J3 1758 aa19.62■□□□□ 0.73
CHD1-202ENST00000414220 COL3A1P02461 1466 aaPredicted RBP19.61■□□□□ 0.73
CHD1-202ENST00000414220 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
CHD1-202ENST00000414220 FCHSD2O94868 740 aa19.61■□□□□ 0.73
CHD1-202ENST00000414220 CABP4P57796 275 aa19.61■□□□□ 0.73
CHD1-202ENST00000414220 CCNL1Q9UK58 526 aaPredicted RBP19.59■□□□□ 0.73
CHD1-202ENST00000414220 DOT1LQ8TEK3 1739 aa19.59■□□□□ 0.73
CHD1-202ENST00000414220 PRKAR2BP31323 418 aa19.58■□□□□ 0.72
CHD1-202ENST00000414220 MTHFSDQ2M296 383 aaKnown RBP19.58■□□□□ 0.72
CHD1-202ENST00000414220 PIGBQ92521 554 aa19.58■□□□□ 0.72
CHD1-202ENST00000414220 BTAF1O14981 1849 aa19.58■□□□□ 0.72
CHD1-202ENST00000414220 RREB1Q92766 1687 aa19.57■□□□□ 0.72
CHD1-202ENST00000414220 SLC15A2Q16348 729 aa19.56■□□□□ 0.72
CHD1-202ENST00000414220 RSPH6AQ9H0K4 717 aa19.56■□□□□ 0.72
CHD1-202ENST00000414220 PRKRIP1Q9H875 184 aaPredicted RBP19.56■□□□□ 0.72
CHD1-202ENST00000414220 PALLDQ8WX93 1383 aa19.56■□□□□ 0.72
CHD1-202ENST00000414220 GNAT3A8MTJ3 354 aa19.54■□□□□ 0.72
CHD1-202ENST00000414220 NUP188Q5SRE5 1749 aa19.54■□□□□ 0.72
CHD1-202ENST00000414220 NFATC2IPQ8NCF5 419 aa19.53■□□□□ 0.72
CHD1-202ENST00000414220 LRRC4BQ9NT99 713 aa19.53■□□□□ 0.72
CHD1-202ENST00000414220 RNMTO43148 476 aaKnown RBP19.52■□□□□ 0.72
CHD1-202ENST00000414220 ANP32CO43423 234 aa19.52■□□□□ 0.72
CHD1-202ENST00000414220 RTF1Q92541 710 aaKnown RBP19.52■□□□□ 0.72
CHD1-202ENST00000414220 MAPK8IP3Q9UPT6 1336 aa19.51■□□□□ 0.71
CHD1-202ENST00000414220 WDR43Q15061 677 aaKnown RBP eCLIP19.51■□□□□ 0.71
CHD1-202ENST00000414220 SLC52A2Q9HAB3 445 aa19.51■□□□□ 0.71
CHD1-202ENST00000414220 ANO8Q9HCE9 1232 aaPredicted RBP19.51■□□□□ 0.71
CHD1-202ENST00000414220 ATG3Q9NT62 314 aa19.51■□□□□ 0.71
CHD1-202ENST00000414220 TFCP2L1Q9NZI6 479 aa19.51■□□□□ 0.71
CHD1-202ENST00000414220 ASAP1Q9ULH1 1129 aa19.51■□□□□ 0.71
CHD1-202ENST00000414220 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
CHD1-202ENST00000414220 MAP3K5Q99683 1374 aa19.5■□□□□ 0.71
CHD1-202ENST00000414220 LOC102724428A0A0B4J2F2 783 aa19.5■□□□□ 0.71
CHD1-202ENST00000414220 SIK1P57059 783 aa19.5■□□□□ 0.71
CHD1-202ENST00000414220 TEFQ10587 303 aa19.5■□□□□ 0.71
CHD1-202ENST00000414220 ATP6V1AP38606 617 aa19.49■□□□□ 0.71
CHD1-202ENST00000414220 PHACTR3Q96KR7 559 aa19.49■□□□□ 0.71
CHD1-202ENST00000414220 RBM42Q9BTD8 480 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms