RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 ARHGEF25Q86VW2 580 aa17.51■□□□□ 0.39
SNHG17-202ENST00000414142 DDX17Q92841 729 aaKnown RBP17.51■□□□□ 0.39
SNHG17-202ENST00000414142 USP19O94966 1318 aa17.51■□□□□ 0.39
SNHG17-202ENST00000414142 BRPF1P55201 1214 aaPredicted RBP17.5■□□□□ 0.39
SNHG17-202ENST00000414142 IGHDP01880 384 aa17.5■□□□□ 0.39
SNHG17-202ENST00000414142 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
SNHG17-202ENST00000414142 ITPRIPQ8IWB1 547 aa17.5■□□□□ 0.39
SNHG17-202ENST00000414142 MRPL50Q8N5N7 158 aaKnown RBP17.5■□□□□ 0.39
SNHG17-202ENST00000414142 CRB1P82279 1406 aa17.49■□□□□ 0.39
SNHG17-202ENST00000414142 MSH5O43196 834 aa17.49■□□□□ 0.39
SNHG17-202ENST00000414142 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
SNHG17-202ENST00000414142 NBPF6Q5VWK0 638 aa17.49■□□□□ 0.39
SNHG17-202ENST00000414142 NBPF4Q96M43 638 aa17.49■□□□□ 0.39
SNHG17-202ENST00000414142 PHRF1Q9P1Y6 1649 aaKnown RBP17.49■□□□□ 0.39
SNHG17-202ENST00000414142 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
SNHG17-202ENST00000414142 DDX19BQ9UMR2 479 aa17.48■□□□□ 0.39
SNHG17-202ENST00000414142 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
SNHG17-202ENST00000414142 XIRP1Q702N8 1843 aaKnown RBP17.48■□□□□ 0.39
SNHG17-202ENST00000414142 ALS2Q96Q42 1657 aa17.47■□□□□ 0.39
SNHG17-202ENST00000414142 HAP1P54257 671 aaPredicted RBP17.47■□□□□ 0.39
SNHG17-202ENST00000414142 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
SNHG17-202ENST00000414142 LRRC59Q96AG4 307 aaKnown RBP17.47■□□□□ 0.39
SNHG17-202ENST00000414142 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
SNHG17-202ENST00000414142 PCDHB15Q9Y5E8 787 aa17.47■□□□□ 0.39
SNHG17-202ENST00000414142 RGPD2P0DJD1 1756 aa17.46■□□□□ 0.39
SNHG17-202ENST00000414142 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
SNHG17-202ENST00000414142 ZNF335Q9H4Z2 1342 aaPredicted RBP17.46■□□□□ 0.39
SNHG17-202ENST00000414142 ZC3H6P61129 1189 aaKnown RBP17.45■□□□□ 0.38
SNHG17-202ENST00000414142 KRT24Q2M2I5 525 aa17.45■□□□□ 0.38
SNHG17-202ENST00000414142 ANKRD24Q8TF21 1146 aa17.45■□□□□ 0.38
SNHG17-202ENST00000414142 ARHGAP45Q92619 1136 aa17.45■□□□□ 0.38
SNHG17-202ENST00000414142 KIAA0232Q92628 1395 aa17.45■□□□□ 0.38
SNHG17-202ENST00000414142 MAP3K5Q99683 1374 aa17.45■□□□□ 0.38
SNHG17-202ENST00000414142 PRKCSHP14314 528 aaPredicted RBP17.44■□□□□ 0.38
SNHG17-202ENST00000414142 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
SNHG17-202ENST00000414142 AXIN2Q9Y2T1 843 aa17.42■□□□□ 0.38
SNHG17-202ENST00000414142 MED1Q15648 1581 aaPredicted RBP17.42■□□□□ 0.38
SNHG17-202ENST00000414142 IL17REQ8NFR9 667 aa17.42■□□□□ 0.38
SNHG17-202ENST00000414142 PDE4AP27815 886 aa17.41■□□□□ 0.38
SNHG17-202ENST00000414142 ANP32AP39687 249 aaKnown RBP17.41■□□□□ 0.38
SNHG17-202ENST00000414142 RGS3P49796 1198 aa17.41■□□□□ 0.38
SNHG17-202ENST00000414142 ERICH6Q7L0X2 663 aa17.41■□□□□ 0.38
SNHG17-202ENST00000414142 RGPD5Q99666 1765 aa17.41■□□□□ 0.38
SNHG17-202ENST00000414142 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
SNHG17-202ENST00000414142 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
SNHG17-202ENST00000414142 BRINP3Q76B58 766 aa17.41■□□□□ 0.38
SNHG17-202ENST00000414142 API5Q9BZZ5 524 aaKnown RBP17.41■□□□□ 0.38
SNHG17-202ENST00000414142 CABLES1Q8TDN4 633 aa17.4■□□□□ 0.38
SNHG17-202ENST00000414142 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
SNHG17-202ENST00000414142 SLAIN2Q9P270 581 aa17.39■□□□□ 0.38
SNHG17-202ENST00000414142 LRRC37A3O60309 1634 aa17.39■□□□□ 0.37
SNHG17-202ENST00000414142 PXDNQ92626 1479 aa17.39■□□□□ 0.37
SNHG17-202ENST00000414142 TAF7Q15545 349 aaPredicted RBP17.39■□□□□ 0.37
SNHG17-202ENST00000414142 BACH2Q9BYV9 841 aa17.39■□□□□ 0.37
SNHG17-202ENST00000414142 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.37
SNHG17-202ENST00000414142 CHMP4BQ9H444 224 aaKnown RBP17.38■□□□□ 0.37
SNHG17-202ENST00000414142 AMOTQ4VCS5 1084 aa17.38■□□□□ 0.37
SNHG17-202ENST00000414142 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
SNHG17-202ENST00000414142 ABCC4O15439 1325 aa17.37■□□□□ 0.37
SNHG17-202ENST00000414142 BABAM1Q9NWV8 329 aa17.36■□□□□ 0.37
SNHG17-202ENST00000414142 ERBB3P21860 1342 aa17.36■□□□□ 0.37
SNHG17-202ENST00000414142 AKAP4Q5JQC9 854 aa17.36■□□□□ 0.37
SNHG17-202ENST00000414142 NCAPD2Q15021 1401 aa17.36■□□□□ 0.37
SNHG17-202ENST00000414142 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
SNHG17-202ENST00000414142 C1orf141Q5JVX7 400 aa17.35■□□□□ 0.37
SNHG17-202ENST00000414142 ZBTB7BO15156 539 aaPredicted RBP17.35■□□□□ 0.37
SNHG17-202ENST00000414142 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
SNHG17-202ENST00000414142 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
SNHG17-202ENST00000414142 LGR6Q9HBX8 967 aa17.35■□□□□ 0.37
SNHG17-202ENST00000414142 NLRP2Q9NX02 1062 aa17.35■□□□□ 0.37
SNHG17-202ENST00000414142 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
SNHG17-202ENST00000414142 CSB-PGBD3P0DP91 1061 aa17.33■□□□□ 0.37
SNHG17-202ENST00000414142 CHRNA2Q15822 529 aa17.33■□□□□ 0.37
SNHG17-202ENST00000414142 PDZRN3Q9UPQ7 1066 aa17.33■□□□□ 0.37
SNHG17-202ENST00000414142 CAMTA1Q9Y6Y1 1673 aa17.33■□□□□ 0.37
SNHG17-202ENST00000414142 LMO7Q8WWI1 1683 aa17.33■□□□□ 0.36
SNHG17-202ENST00000414142 PTPRCP08575 1304 aa17.33■□□□□ 0.36
SNHG17-202ENST00000414142 TEFQ10587 303 aa17.32■□□□□ 0.36
SNHG17-202ENST00000414142 MPRIPQ6WCQ1 1025 aa17.32■□□□□ 0.36
SNHG17-202ENST00000414142 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
SNHG17-202ENST00000414142 COL18A1P39060 1754 aa17.32■□□□□ 0.36
SNHG17-202ENST00000414142 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
SNHG17-202ENST00000414142 NOP58Q9Y2X3 529 aaKnown RBP17.32■□□□□ 0.36
SNHG17-202ENST00000414142 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
SNHG17-202ENST00000414142 CCDC30Q5VVM6 783 aa17.31■□□□□ 0.36
SNHG17-202ENST00000414142 CRYBG1Q9Y4K1 1723 aa17.31■□□□□ 0.36
SNHG17-202ENST00000414142 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
SNHG17-202ENST00000414142 SOS2Q07890 1332 aaPredicted RBP17.3■□□□□ 0.36
SNHG17-202ENST00000414142 RNMTO43148 476 aaKnown RBP17.3■□□□□ 0.36
SNHG17-202ENST00000414142 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
SNHG17-202ENST00000414142 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
SNHG17-202ENST00000414142 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
SNHG17-202ENST00000414142 NECTIN2Q92692 538 aa17.29■□□□□ 0.36
SNHG17-202ENST00000414142 CPDO75976 1380 aa17.29■□□□□ 0.36
SNHG17-202ENST00000414142 G2E3Q7L622 706 aa17.29■□□□□ 0.36
SNHG17-202ENST00000414142 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
SNHG17-202ENST00000414142 BTBD11A6QL63 1104 aa17.28■□□□□ 0.36
SNHG17-202ENST00000414142 NPM2Q86SE8 214 aaKnown RBP17.28■□□□□ 0.36
SNHG17-202ENST00000414142 RGS12O14924 1447 aa17.28■□□□□ 0.36
SNHG17-202ENST00000414142 ZBTB47Q9UFB7 747 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms