RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 PLEKHF1Q96S99 279 aa24.53■■□□□ 1.52
CIRBP-202ENST00000413636 DISP2A7MBM2 1401 aa24.52■■□□□ 1.52
CIRBP-202ENST00000413636 BARGINQ6ZT62 677 aa24.52■■□□□ 1.52
CIRBP-202ENST00000413636 FAM98CQ17RN3 349 aaKnown RBP24.51■■□□□ 1.51
CIRBP-202ENST00000413636 RUNDC1Q96C34 613 aa24.5■■□□□ 1.51
CIRBP-202ENST00000413636 PHACTR3Q96KR7 559 aa24.5■■□□□ 1.51
CIRBP-202ENST00000413636 OVOS2A0A0G2JMS6 1433 aa24.49■■□□□ 1.51
CIRBP-202ENST00000413636 MAPK8IP3Q9UPT6 1336 aa24.49■■□□□ 1.51
CIRBP-202ENST00000413636 NEFMP07197 916 aa24.49■■□□□ 1.51
CIRBP-202ENST00000413636 CDCA7Q9BWT1 371 aaPredicted RBP24.48■■□□□ 1.51
CIRBP-202ENST00000413636 POTEAQ6S8J7 498 aa24.47■■□□□ 1.51
CIRBP-202ENST00000413636 PKD1L3Q7Z443 1732 aa24.47■■□□□ 1.51
CIRBP-202ENST00000413636 RBM6P78332 1123 aaKnown RBP24.46■■□□□ 1.51
CIRBP-202ENST00000413636 PLEKHO1Q53GL0 409 aaPredicted RBP24.46■■□□□ 1.51
CIRBP-202ENST00000413636 THSD7AQ9UPZ6 1657 aa24.45■■□□□ 1.5
CIRBP-202ENST00000413636 A0A0G2JS52 829 aa24.45■■□□□ 1.5
CIRBP-202ENST00000413636 MYT1Q01538 1121 aa24.45■■□□□ 1.5
CIRBP-202ENST00000413636 MTHFSDQ2M296 383 aaKnown RBP24.45■■□□□ 1.5
CIRBP-202ENST00000413636 PLEKHG2Q9H7P9 1386 aa24.45■■□□□ 1.5
CIRBP-202ENST00000413636 SENP3-EIF4A1A0A087X0R7 540 aa24.44■■□□□ 1.5
CIRBP-202ENST00000413636 AMOTQ4VCS5 1084 aa24.44■■□□□ 1.5
CIRBP-202ENST00000413636 ZCRB1Q8TBF4 217 aaKnown RBP24.44■■□□□ 1.5
CIRBP-202ENST00000413636 LRRC37A3O60309 1634 aa24.44■■□□□ 1.5
CIRBP-202ENST00000413636 APAF1O14727 1248 aa24.43■■□□□ 1.5
CIRBP-202ENST00000413636 RXRBP28702 533 aa24.43■■□□□ 1.5
CIRBP-202ENST00000413636 PDE3BQ13370 1112 aa24.43■■□□□ 1.5
CIRBP-202ENST00000413636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.43■■□□□ 1.54e-13■□□□□ 8.8
CIRBP-202ENST00000413636 SPG7Q9UQ90 795 aa24.43■■□□□ 1.5
CIRBP-202ENST00000413636 SHANK3Q9BYB0 1731 aa24.43■■□□□ 1.5
CIRBP-202ENST00000413636 ONECUT3O60422 494 aaPredicted RBP24.43■■□□□ 1.5
CIRBP-202ENST00000413636 EXOC5O00471 708 aa24.42■■□□□ 1.5
CIRBP-202ENST00000413636 DDB1Q16531 1140 aa24.41■■□□□ 1.5
CIRBP-202ENST00000413636 TNS2Q63HR2 1409 aa24.41■■□□□ 1.5
CIRBP-202ENST00000413636 ZNF530Q6P9A1 599 aaPredicted RBP24.41■■□□□ 1.5
CIRBP-202ENST00000413636 GAS2L2Q8NHY3 880 aa24.41■■□□□ 1.5
CIRBP-202ENST00000413636 RRP7AQ9Y3A4 280 aaKnown RBP24.41■■□□□ 1.5
CIRBP-202ENST00000413636 DLG5Q8TDM6 1919 aa24.4■■□□□ 1.5
CIRBP-202ENST00000413636 NFE2L2Q16236 605 aa24.4■■□□□ 1.5
CIRBP-202ENST00000413636 SEPT12Q8IYM1 358 aa24.4■■□□□ 1.5
CIRBP-202ENST00000413636 TMPOP42166 694 aaKnown RBP24.39■■□□□ 1.5
CIRBP-202ENST00000413636 PCDH11XQ9BZA7 1347 aa24.39■■□□□ 1.49
CIRBP-202ENST00000413636 PCDH11YQ9BZA8 1340 aa24.39■■□□□ 1.49
CIRBP-202ENST00000413636 NEFLP07196 543 aa24.39■■□□□ 1.49
CIRBP-202ENST00000413636 NEUROD2Q15784 382 aa24.39■■□□□ 1.49
CIRBP-202ENST00000413636 NGEFQ8N5V2 710 aa24.38■■□□□ 1.49
CIRBP-202ENST00000413636 DDX54Q8TDD1 881 aaKnown RBP24.38■■□□□ 1.49
CIRBP-202ENST00000413636 CYP27B1O15528 508 aa24.37■■□□□ 1.49
CIRBP-202ENST00000413636 RIPK4P57078 832 aa24.36■■□□□ 1.49
CIRBP-202ENST00000413636 C1orf141Q5JVX7 400 aa24.36■■□□□ 1.49
CIRBP-202ENST00000413636 BRWD3Q6RI45 1802 aa24.35■■□□□ 1.49
CIRBP-202ENST00000413636 PHKG2P15735 406 aa24.35■■□□□ 1.49
CIRBP-202ENST00000413636 IFNL2Q8IZJ0 200 aa24.35■■□□□ 1.49
CIRBP-202ENST00000413636 SALL2Q9Y467 1007 aaPredicted RBP24.35■■□□□ 1.49
CIRBP-202ENST00000413636 AKAP4Q5JQC9 854 aa24.35■■□□□ 1.49
CIRBP-202ENST00000413636 MAP3K5Q99683 1374 aa24.34■■□□□ 1.49
CIRBP-202ENST00000413636 RGS12O14924 1447 aa24.33■■□□□ 1.49
CIRBP-202ENST00000413636 GNAT3A8MTJ3 354 aa24.33■■□□□ 1.49
CIRBP-202ENST00000413636 MARCH10Q8NA82 808 aaPredicted RBP24.32■■□□□ 1.48
CIRBP-202ENST00000413636 VIRMAQ69YN4 1812 aaKnown RBP24.32■■□□□ 1.48
CIRBP-202ENST00000413636 MPRIPQ6WCQ1 1025 aa24.3■■□□□ 1.48
CIRBP-202ENST00000413636 TRIM35Q9UPQ4 493 aa24.3■■□□□ 1.48
CIRBP-202ENST00000413636 SUPT16HQ9Y5B9 1047 aaKnown RBP24.3■■□□□ 1.48
CIRBP-202ENST00000413636 RTF1Q92541 710 aaKnown RBP24.29■■□□□ 1.48
CIRBP-202ENST00000413636 HTATSF1O43719 755 aaKnown RBP24.28■■□□□ 1.48
CIRBP-202ENST00000413636 LMOD3Q0VAK6 560 aa24.28■■□□□ 1.48
CIRBP-202ENST00000413636 DCTN1Q14203 1278 aa24.28■■□□□ 1.48
CIRBP-202ENST00000413636 HSP90AB1P08238 724 aaKnown RBP24.28■■□□□ 1.48
CIRBP-202ENST00000413636 NKX1-1Q15270 411 aaPredicted RBP24.28■■□□□ 1.48
CIRBP-202ENST00000413636 MCM10Q7L590 875 aa24.28■■□□□ 1.48
CIRBP-202ENST00000413636 SCN11AQ9UI33 1791 aa24.27■■□□□ 1.48
CIRBP-202ENST00000413636 KDM6AO15550 1401 aaPredicted RBP24.27■■□□□ 1.48
CIRBP-202ENST00000413636 NCBP3Q53F19 620 aaKnown RBP24.27■■□□□ 1.48
CIRBP-202ENST00000413636 KRT27Q7Z3Y8 459 aa24.27■■□□□ 1.48
CIRBP-202ENST00000413636 LGR6Q9HBX8 967 aa24.27■■□□□ 1.48
CIRBP-202ENST00000413636 RNMTO43148 476 aaKnown RBP24.26■■□□□ 1.47
CIRBP-202ENST00000413636 CCDC27Q2M243 656 aa24.26■■□□□ 1.47
CIRBP-202ENST00000413636 FAM182BQ5T319 152 aa24.26■■□□□ 1.47
CIRBP-202ENST00000413636 IL17REQ8NFR9 667 aa24.26■■□□□ 1.47
CIRBP-202ENST00000413636 DCAF5Q96JK2 942 aa24.26■■□□□ 1.47
CIRBP-202ENST00000413636 ADAMTS7Q9UKP4 1686 aa24.26■■□□□ 1.47
CIRBP-202ENST00000413636 WWC1Q8IX03 1113 aa24.25■■□□□ 1.47
CIRBP-202ENST00000413636 THUMPD2Q9BTF0 503 aaKnown RBP24.25■■□□□ 1.47
CIRBP-202ENST00000413636 KAT6BQ8WYB5 2073 aa24.25■■□□□ 1.47
CIRBP-202ENST00000413636 FKBP8Q14318 412 aa24.24■■□□□ 1.47
CIRBP-202ENST00000413636 TOGARAM1Q9Y4F4 1720 aa24.24■■□□□ 1.47
CIRBP-202ENST00000413636 DOT1LQ8TEK3 1739 aa24.23■■□□□ 1.47
CIRBP-202ENST00000413636 CEMIPQ8WUJ3 1361 aa24.23■■□□□ 1.47
CIRBP-202ENST00000413636 ERICH6BQ5W0A0 696 aa24.21■■□□□ 1.47
CIRBP-202ENST00000413636 ZNF521Q96K83 1311 aa24.21■■□□□ 1.47
CIRBP-202ENST00000413636 ITGB4P16144 1822 aa24.2■■□□□ 1.46
CIRBP-202ENST00000413636 ACSBG1Q96GR2 724 aa24.19■■□□□ 1.46
CIRBP-202ENST00000413636 ERVV-2B6SEH9 535 aa24.18■■□□□ 1.46
CIRBP-202ENST00000413636 GOLGA2Q08379 1002 aa24.18■■□□□ 1.46
CIRBP-202ENST00000413636 TEFQ10587 303 aa24.18■■□□□ 1.46
CIRBP-202ENST00000413636 CABP4P57796 275 aa24.17■■□□□ 1.46
CIRBP-202ENST00000413636 SLC52A2Q9HAB3 445 aa24.17■■□□□ 1.46
CIRBP-202ENST00000413636 SIPA1L3O60292 1781 aaPredicted RBP24.17■■□□□ 1.46
CIRBP-202ENST00000413636 MRC1P22897 1456 aa24.17■■□□□ 1.46
CIRBP-202ENST00000413636 BCL9O00512 1426 aa24.17■■□□□ 1.46
CIRBP-202ENST00000413636 SBF2Q86WG5 1849 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms