RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 APLP1P51693 650 aa18.41■□□□□ 0.54
PCCA-204ENST00000413170 CD2APQ9Y5K6 639 aa18.4■□□□□ 0.54
PCCA-204ENST00000413170 KTN1Q86UP2 1357 aaKnown RBP18.4■□□□□ 0.54
PCCA-204ENST00000413170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.39■□□□□ 0.53
PCCA-204ENST00000413170 LY75O60449 1722 aa18.39■□□□□ 0.53
PCCA-204ENST00000413170 DOT1LQ8TEK3 1739 aa18.39■□□□□ 0.53
PCCA-204ENST00000413170 NSD2O96028 1365 aa18.39■□□□□ 0.53
PCCA-204ENST00000413170 ANKRD36BQ8N2N9 1353 aa18.39■□□□□ 0.53
PCCA-204ENST00000413170 LTN1O94822 1766 aa18.37■□□□□ 0.53
PCCA-204ENST00000413170 DNAJC5GQ8N7S2 189 aa18.36■□□□□ 0.53
PCCA-204ENST00000413170 IGSF1Q8N6C5 1336 aa18.35■□□□□ 0.53
PCCA-204ENST00000413170 COL13A1Q5TAT6 717 aaPredicted RBP18.35■□□□□ 0.53
PCCA-204ENST00000413170 NME9Q86XW9 330 aa18.35■□□□□ 0.53
PCCA-204ENST00000413170 LTV1Q96GA3 475 aaPredicted RBP18.34■□□□□ 0.53
PCCA-204ENST00000413170 USP31Q70CQ4 1352 aa18.33■□□□□ 0.53
PCCA-204ENST00000413170 USP47Q96K76 1375 aa18.33■□□□□ 0.53
PCCA-204ENST00000413170 MON2Q7Z3U7 1717 aa18.32■□□□□ 0.52
PCCA-204ENST00000413170 USP54Q70EL1 1684 aa18.31■□□□□ 0.52
PCCA-204ENST00000413170 C5P01031 1676 aa18.3■□□□□ 0.52
PCCA-204ENST00000413170 TOMM70O94826 608 aa18.29■□□□□ 0.52
PCCA-204ENST00000413170 HTRA3P83110 453 aa18.28■□□□□ 0.52
PCCA-204ENST00000413170 SBNO2Q9Y2G9 1366 aa18.28■□□□□ 0.52
PCCA-204ENST00000413170 TNS4Q8IZW8 715 aa18.27■□□□□ 0.52
PCCA-204ENST00000413170 FLAD1Q8NFF5 587 aa18.27■□□□□ 0.52
PCCA-204ENST00000413170 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
PCCA-204ENST00000413170 WDR90Q96KV7 1748 aa18.26■□□□□ 0.51
PCCA-204ENST00000413170 FAM208AQ9UK61 1670 aaKnown RBP18.26■□□□□ 0.51
PCCA-204ENST00000413170 PHF14O94880 888 aa18.26■□□□□ 0.51
PCCA-204ENST00000413170 MEGF6O75095 1541 aa18.26■□□□□ 0.51
PCCA-204ENST00000413170 CICQ96RK0 1608 aaPredicted RBP18.25■□□□□ 0.51
PCCA-204ENST00000413170 SMIM5Q71RC9 77 aa18.25■□□□□ 0.51
PCCA-204ENST00000413170 AMIGO3Q86WK7 504 aa18.25■□□□□ 0.51
PCCA-204ENST00000413170 IP6K1Q92551 441 aa18.25■□□□□ 0.51
PCCA-204ENST00000413170 NMRK2Q9NPI5 230 aa18.25■□□□□ 0.51
PCCA-204ENST00000413170 PRELPP51888 382 aa18.24■□□□□ 0.51
PCCA-204ENST00000413170 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
PCCA-204ENST00000413170 AK7Q96M32 723 aa18.24■□□□□ 0.51
PCCA-204ENST00000413170 CD163L1Q9NR16 1453 aa18.24■□□□□ 0.51
PCCA-204ENST00000413170 PALLDQ8WX93 1383 aa18.23■□□□□ 0.51
PCCA-204ENST00000413170 PCNTO95613 3336 aa18.23■□□□□ 0.51
PCCA-204ENST00000413170 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
PCCA-204ENST00000413170 TOGARAM1Q9Y4F4 1720 aa18.21■□□□□ 0.51
PCCA-204ENST00000413170 JMYQ8N9B5 988 aa18.21■□□□□ 0.51
PCCA-204ENST00000413170 TMC1Q8TDI8 760 aa18.21■□□□□ 0.51
PCCA-204ENST00000413170 TAF1LQ8IZX4 1826 aa18.21■□□□□ 0.51
PCCA-204ENST00000413170 HDGFL2Q7Z4V5 671 aaPredicted RBP18.2■□□□□ 0.5
PCCA-204ENST00000413170 EDC4Q6P2E9 1401 aaKnown RBP18.2■□□□□ 0.5
PCCA-204ENST00000413170 ROCK2O75116 1388 aaKnown RBP18.19■□□□□ 0.5
PCCA-204ENST00000413170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.19■□□□□ 0.5
PCCA-204ENST00000413170 RBM46Q8TBY0 533 aaKnown RBP18.19■□□□□ 0.5
PCCA-204ENST00000413170 RGPD2P0DJD1 1756 aa18.19■□□□□ 0.5
PCCA-204ENST00000413170 HOXC9P31274 260 aa18.18■□□□□ 0.5
PCCA-204ENST00000413170 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
PCCA-204ENST00000413170 USHBP1Q8N6Y0 703 aa18.18■□□□□ 0.5
PCCA-204ENST00000413170 BCS1LQ9Y276 419 aa18.18■□□□□ 0.5
PCCA-204ENST00000413170 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
PCCA-204ENST00000413170 PXDNLA1KZ92 1463 aa18.17■□□□□ 0.5
PCCA-204ENST00000413170 MAP3K19Q56UN5 1328 aa18.17■□□□□ 0.5
PCCA-204ENST00000413170 UBR3Q6ZT12 1888 aa18.16■□□□□ 0.5
PCCA-204ENST00000413170 HMGB2P26583 209 aaKnown RBP18.16■□□□□ 0.5
PCCA-204ENST00000413170 AMPHP49418 695 aa18.16■□□□□ 0.5
PCCA-204ENST00000413170 ARHGAP27Q6ZUM4 889 aa18.16■□□□□ 0.5
PCCA-204ENST00000413170 SLC12A5Q9H2X9 1139 aa18.16■□□□□ 0.5
PCCA-204ENST00000413170 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
PCCA-204ENST00000413170 FBLN1P23142 703 aa18.15■□□□□ 0.5
PCCA-204ENST00000413170 L3MBTL2Q969R5 705 aa18.15■□□□□ 0.5
PCCA-204ENST00000413170 A0A1W2PP64 1363 aa18.15■□□□□ 0.5
PCCA-204ENST00000413170 RAPGEF4Q8WZA2 1011 aa18.14■□□□□ 0.49
PCCA-204ENST00000413170 A0A0G2JLW4 131 aa18.13■□□□□ 0.49
PCCA-204ENST00000413170 MMP10P09238 476 aa18.13■□□□□ 0.49
PCCA-204ENST00000413170 SSFA2P28290 1259 aa18.13■□□□□ 0.49
PCCA-204ENST00000413170 NBPF6Q5VWK0 638 aa18.13■□□□□ 0.49
PCCA-204ENST00000413170 NBPF4Q96M43 638 aa18.13■□□□□ 0.49
PCCA-204ENST00000413170 N4BP2Q86UW6 1770 aaPredicted RBP18.12■□□□□ 0.49
PCCA-204ENST00000413170 FSTL1Q12841 308 aa18.12■□□□□ 0.49
PCCA-204ENST00000413170 CGNL1Q0VF96 1302 aa18.12■□□□□ 0.49
PCCA-204ENST00000413170 PCDH11XQ9BZA7 1347 aa18.12■□□□□ 0.49
PCCA-204ENST00000413170 PCDH11YQ9BZA8 1340 aa18.12■□□□□ 0.49
PCCA-204ENST00000413170 KIAA1551Q9HCM1 1747 aa18.12■□□□□ 0.49
PCCA-204ENST00000413170 C9orf131Q5VYM1 1079 aa18.11■□□□□ 0.49
PCCA-204ENST00000413170 LINC00116Q8NCU8 138 aa18.11■□□□□ 0.49
PCCA-204ENST00000413170 SMARCC1Q92922 1105 aaPredicted RBP18.11■□□□□ 0.49
PCCA-204ENST00000413170 TERF2IPQ9NYB0 399 aa18.11■□□□□ 0.49
PCCA-204ENST00000413170 KCPQ6ZWJ8 1503 aa18.1■□□□□ 0.49
PCCA-204ENST00000413170 GNPATO15228 680 aa18.1■□□□□ 0.49
PCCA-204ENST00000413170 TATP17735 454 aaPredicted RBP18.1■□□□□ 0.49
PCCA-204ENST00000413170 COG3Q96JB2 828 aa18.1■□□□□ 0.49
PCCA-204ENST00000413170 PLEKHG2Q9H7P9 1386 aa18.09■□□□□ 0.49
PCCA-204ENST00000413170 FCHSD2O94868 740 aa18.09■□□□□ 0.49
PCCA-204ENST00000413170 CNKSR2Q8WXI2 1034 aa18.09■□□□□ 0.49
PCCA-204ENST00000413170 KIF13BQ9NQT8 1826 aa18.08■□□□□ 0.48
PCCA-204ENST00000413170 HSPA1AP0DMV8 641 aaKnown RBP18.08■□□□□ 0.48
PCCA-204ENST00000413170 HSPA1BP0DMV9 641 aaKnown RBP18.08■□□□□ 0.48
PCCA-204ENST00000413170 TGFB2P61812 414 aa18.08■□□□□ 0.48
PCCA-204ENST00000413170 C10orf71Q711Q0 1435 aa18.07■□□□□ 0.48
PCCA-204ENST00000413170 SMG6Q86US8 1419 aaKnown RBP18.07■□□□□ 0.48
PCCA-204ENST00000413170 RTL1A6NKG5 1358 aa18.07■□□□□ 0.48
PCCA-204ENST00000413170 CYP27B1O15528 508 aa18.07■□□□□ 0.48
PCCA-204ENST00000413170 DPEP1P16444 411 aa18.07■□□□□ 0.48
PCCA-204ENST00000413170 RRS1Q15050 365 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms