RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
NUB1-201ENST00000413040 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
NUB1-201ENST00000413040 NLRP6P59044 892 aa17.12■□□□□ 0.33
NUB1-201ENST00000413040 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
NUB1-201ENST00000413040 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
NUB1-201ENST00000413040 SNX21Q969T3 373 aa17.12■□□□□ 0.33
NUB1-201ENST00000413040 DDX11L8A8MPP1 907 aa17.11■□□□□ 0.33
NUB1-201ENST00000413040 CEP85Q6P2H3 762 aa17.11■□□□□ 0.33
NUB1-201ENST00000413040 PIK3R4Q99570 1358 aa17.11■□□□□ 0.33
NUB1-201ENST00000413040 MSH6P52701 1360 aa17.11■□□□□ 0.33
NUB1-201ENST00000413040 AGLP35573 1532 aa17.11■□□□□ 0.33
NUB1-201ENST00000413040 XRCC6P12956 609 aaKnown RBP eCLIP17.1■□□□□ 0.33
NUB1-201ENST00000413040 GBP4Q96PP9 640 aa17.1■□□□□ 0.33
NUB1-201ENST00000413040 RPAP2Q8IXW5 612 aaPredicted RBP17.1■□□□□ 0.33
NUB1-201ENST00000413040 TTC22Q5TAA0 569 aa17.1■□□□□ 0.33
NUB1-201ENST00000413040 GAS2L2Q8NHY3 880 aa17.1■□□□□ 0.33
NUB1-201ENST00000413040 STK31Q9BXU1 1019 aa17.1■□□□□ 0.33
NUB1-201ENST00000413040 SIRT1Q96EB6 747 aa17.09■□□□□ 0.33
NUB1-201ENST00000413040 FKBP5Q13451 457 aaPredicted RBP17.09■□□□□ 0.33
NUB1-201ENST00000413040 TSHZ3Q63HK5 1081 aa17.09■□□□□ 0.33
NUB1-201ENST00000413040 EXOC6BQ9Y2D4 811 aa17.09■□□□□ 0.33
NUB1-201ENST00000413040 RIMBP3CA6NJZ7 1639 aa17.08■□□□□ 0.32
NUB1-201ENST00000413040 RIMBP3BA6NNM3 1639 aa17.08■□□□□ 0.32
NUB1-201ENST00000413040 RIMBP3Q9UFD9 1639 aa17.08■□□□□ 0.32
NUB1-201ENST00000413040 PLEKHG3A1L390 1219 aa17.08■□□□□ 0.32
NUB1-201ENST00000413040 SDSP20132 328 aa17.08■□□□□ 0.32
NUB1-201ENST00000413040 CASC1Q6TDU7 716 aa17.08■□□□□ 0.32
NUB1-201ENST00000413040 EYA1Q99502 592 aa17.08■□□□□ 0.32
NUB1-201ENST00000413040 DLG5Q8TDM6 1919 aa17.08■□□□□ 0.32
NUB1-201ENST00000413040 SSFA2P28290 1259 aa17.08■□□□□ 0.32
NUB1-201ENST00000413040 HMMRO75330 724 aa17.07■□□□□ 0.32
NUB1-201ENST00000413040 RBM33Q96EV2 1170 aaKnown RBP17.07■□□□□ 0.32
NUB1-201ENST00000413040 NCLP19338 710 aaKnown RBP17.05■□□□□ 0.32
NUB1-201ENST00000413040 NRXN3Q9Y4C0 1643 aa17.05■□□□□ 0.32
NUB1-201ENST00000413040 USP6P35125 1406 aa17.05■□□□□ 0.32
NUB1-201ENST00000413040 PTPRCP08575 1304 aa17.05■□□□□ 0.32
NUB1-201ENST00000413040 RTL1A6NKG5 1358 aa17.05■□□□□ 0.32
NUB1-201ENST00000413040 USHBP1Q8N6Y0 703 aa17.05■□□□□ 0.32
NUB1-201ENST00000413040 CIZ1Q9ULV3 898 aaPredicted RBP17.03■□□□□ 0.32
NUB1-201ENST00000413040 ADAMTS13Q76LX8 1427 aa17.03■□□□□ 0.32
NUB1-201ENST00000413040 SETD1AO15047 1707 aaKnown RBP17.03■□□□□ 0.32
NUB1-201ENST00000413040 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
NUB1-201ENST00000413040 RAB3GAP1Q15042 981 aa17.03■□□□□ 0.32
NUB1-201ENST00000413040 FAM43AQ8N2R8 423 aa17.03■□□□□ 0.32
NUB1-201ENST00000413040 ABTB2Q8N961 1025 aa17.03■□□□□ 0.32
NUB1-201ENST00000413040 FOXD4L5Q5VV16 416 aaPredicted RBP17.03■□□□□ 0.32
NUB1-201ENST00000413040 NOL8Q76FK4 1167 aaKnown RBP17.03■□□□□ 0.32
NUB1-201ENST00000413040 FOXD4L4Q8WXT5 416 aaPredicted RBP17.03■□□□□ 0.32
NUB1-201ENST00000413040 TRIM6-TRIM34B2RNG4 842 aa17.02■□□□□ 0.32
NUB1-201ENST00000413040 RILPL2Q969X0 211 aa17.02■□□□□ 0.32
NUB1-201ENST00000413040 RABEP1Q15276 862 aa17.02■□□□□ 0.31
NUB1-201ENST00000413040 USP26Q9BXU7 913 aa17.02■□□□□ 0.31
NUB1-201ENST00000413040 TECPR2O15040 1411 aa17.02■□□□□ 0.31
NUB1-201ENST00000413040 GNAI2P04899 355 aa17.01■□□□□ 0.31
NUB1-201ENST00000413040 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
NUB1-201ENST00000413040 DDX49Q9Y6V7 483 aaKnown RBP17.01■□□□□ 0.31
NUB1-201ENST00000413040 GRPEL1Q9HAV7 217 aa17.01■□□□□ 0.31
NUB1-201ENST00000413040 RRAGDQ9NQL2 400 aaPredicted RBP17.01■□□□□ 0.31
NUB1-201ENST00000413040 OVOS2A0A0J9YW53 1432 aa17.01■□□□□ 0.31
NUB1-201ENST00000413040 OVOS2Q6IE36 1432 aa17.01■□□□□ 0.31
NUB1-201ENST00000413040 DDIT3P35638 169 aa17■□□□□ 0.31
NUB1-201ENST00000413040 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
NUB1-201ENST00000413040 FLIIQ13045 1269 aa17■□□□□ 0.31
NUB1-201ENST00000413040 FLT4P35916 1363 aa17■□□□□ 0.31
NUB1-201ENST00000413040 KIAA0232Q92628 1395 aa17■□□□□ 0.31
NUB1-201ENST00000413040 ATP10DQ9P241 1426 aa17■□□□□ 0.31
NUB1-201ENST00000413040 MRE11P49959 708 aa17■□□□□ 0.31
NUB1-201ENST00000413040 MCTP1Q6DN14 999 aa16.99■□□□□ 0.31
NUB1-201ENST00000413040 FSD2A1L4K1 749 aa16.99■□□□□ 0.31
NUB1-201ENST00000413040 REC8O95072 547 aa16.99■□□□□ 0.31
NUB1-201ENST00000413040 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
NUB1-201ENST00000413040 GNAT3A8MTJ3 354 aa16.99■□□□□ 0.31
NUB1-201ENST00000413040 ST18O60284 1047 aa16.99■□□□□ 0.31
NUB1-201ENST00000413040 CCDC30Q5VVM6 783 aa16.99■□□□□ 0.31
NUB1-201ENST00000413040 REREQ9P2R6 1566 aa16.99■□□□□ 0.31
NUB1-201ENST00000413040 RGS12O14924 1447 aa16.98■□□□□ 0.31
NUB1-201ENST00000413040 KIF24Q5T7B8 1368 aa16.98■□□□□ 0.31
NUB1-201ENST00000413040 PDE1AP54750 535 aa16.98■□□□□ 0.31
NUB1-201ENST00000413040 TTC21AQ8NDW8 1320 aa16.98■□□□□ 0.31
NUB1-201ENST00000413040 IL1RAPL2Q9NP60 686 aa16.98■□□□□ 0.31
NUB1-201ENST00000413040 PTPRUQ92729 1446 aa16.98■□□□□ 0.31
NUB1-201ENST00000413040 MON2Q7Z3U7 1717 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 PNMA6EA0A0J9YXQ4 647 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 CRB1P82279 1406 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 ERC2O15083 957 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 KCNA6P17658 529 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 PKP1Q13835 747 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 GAS2L3Q86XJ1 694 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 ZGPATQ8N5A5 531 aaKnown RBP16.97■□□□□ 0.31
NUB1-201ENST00000413040 NCOA3Q9Y6Q9 1424 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 PLEKHG1Q9ULL1 1385 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
NUB1-201ENST00000413040 SBNO1A3KN83 1393 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 C3P01024 1663 aa16.97■□□□□ 0.31
NUB1-201ENST00000413040 BAG4O95429 457 aaKnown RBP16.96■□□□□ 0.31
NUB1-201ENST00000413040 NEK4P51957 841 aa16.96■□□□□ 0.31
NUB1-201ENST00000413040 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.31
NUB1-201ENST00000413040 ANO2Q9NQ90 1003 aa16.96■□□□□ 0.31
NUB1-201ENST00000413040 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms