RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 KRT24Q2M2I5 525 aa31.13■■■□□ 2.57
VRK2-202ENST00000412104 HAP1P54257 671 aaPredicted RBP31.12■■■□□ 2.57
VRK2-202ENST00000412104 ORAI2Q96SN7 254 aa31.12■■■□□ 2.57
VRK2-202ENST00000412104 PHRF1Q9P1Y6 1649 aaKnown RBP31.12■■■□□ 2.57
VRK2-202ENST00000412104 LTV1Q96GA3 475 aaPredicted RBP31.12■■■□□ 2.57
VRK2-202ENST00000412104 PROSER2Q86WR7 435 aaPredicted RBP31.11■■■□□ 2.57
VRK2-202ENST00000412104 API5Q9BZZ5 524 aaKnown RBP31.1■■■□□ 2.57
VRK2-202ENST00000412104 IP6K1Q92551 441 aa31.1■■■□□ 2.57
VRK2-202ENST00000412104 CHMP4BQ9H444 224 aaKnown RBP31.09■■■□□ 2.57
VRK2-202ENST00000412104 ZBTB7BO15156 539 aaPredicted RBP31.08■■■□□ 2.57
VRK2-202ENST00000412104 KCNH5Q8NCM2 988 aa31.08■■■□□ 2.57
VRK2-202ENST00000412104 KIF1AQ12756 1690 aa31.08■■■□□ 2.57
VRK2-202ENST00000412104 TRPM3Q9HCF6 1732 aaPredicted RBP31.08■■■□□ 2.57
VRK2-202ENST00000412104 HTATSF1O43719 755 aaKnown RBP31.07■■■□□ 2.56
VRK2-202ENST00000412104 SMC5Q8IY18 1101 aa31.07■■■□□ 2.56
VRK2-202ENST00000412104 SLIT3O75094 1523 aa31.06■■■□□ 2.56
VRK2-202ENST00000412104 MIS18AQ9NYP9 233 aa31.05■■■□□ 2.56
VRK2-202ENST00000412104 TSPYL4Q9UJ04 414 aa31.05■■■□□ 2.56
VRK2-202ENST00000412104 XPCQ01831 940 aaPredicted RBP31.04■■■□□ 2.56
VRK2-202ENST00000412104 C1orf167Q5SNV9 1468 aa31.04■■■□□ 2.56
VRK2-202ENST00000412104 GNAT3A8MTJ3 354 aa31.03■■■□□ 2.56
VRK2-202ENST00000412104 DDRGK1Q96HY6 314 aa31.03■■■□□ 2.56
VRK2-202ENST00000412104 MSH6P52701 1360 aa31.03■■■□□ 2.56
VRK2-202ENST00000412104 MAP3K5Q99683 1374 aa31.03■■■□□ 2.56
VRK2-202ENST00000412104 USHBP1Q8N6Y0 703 aa31.02■■■□□ 2.56
VRK2-202ENST00000412104 RGS12O14924 1447 aa31.02■■■□□ 2.56
VRK2-202ENST00000412104 MYT1Q01538 1121 aa31.01■■■□□ 2.55
VRK2-202ENST00000412104 C19orf44Q9H6X5 657 aa31.01■■■□□ 2.55
VRK2-202ENST00000412104 STRCP1A6NGW2 1772 aa31■■■□□ 2.55
VRK2-202ENST00000412104 RGPD2P0DJD1 1756 aa31■■■□□ 2.55
VRK2-202ENST00000412104 C1orf115Q9H7X2 142 aa30.98■■■□□ 2.55
VRK2-202ENST00000412104 ZBTB7CA1YPR0 619 aa30.98■■■□□ 2.55
VRK2-202ENST00000412104 NBPF6Q5VWK0 638 aa30.97■■■□□ 2.55
VRK2-202ENST00000412104 NBPF4Q96M43 638 aa30.97■■■□□ 2.55
VRK2-202ENST00000412104 GCP02774 474 aa30.96■■■□□ 2.55
VRK2-202ENST00000412104 PTPRCP08575 1304 aa30.96■■■□□ 2.55
VRK2-202ENST00000412104 USP19O94966 1318 aa30.96■■■□□ 2.55
VRK2-202ENST00000412104 INTS3Q68E01 1043 aaKnown RBP30.95■■■□□ 2.55
VRK2-202ENST00000412104 KRT28Q7Z3Y7 464 aa30.95■■■□□ 2.55
VRK2-202ENST00000412104 IL17REQ8NFR9 667 aa30.94■■■□□ 2.54
VRK2-202ENST00000412104 ARHGEF25Q86VW2 580 aa30.94■■■□□ 2.54
VRK2-202ENST00000412104 TMEM94Q12767 1356 aa30.94■■■□□ 2.54
VRK2-202ENST00000412104 NUCB1Q02818 461 aa30.93■■■□□ 2.54
VRK2-202ENST00000412104 LMOD2Q6P5Q4 547 aa30.93■■■□□ 2.54
VRK2-202ENST00000412104 MST1RQ04912 1400 aa30.93■■■□□ 2.54
VRK2-202ENST00000412104 ALS2Q96Q42 1657 aa30.93■■■□□ 2.54
VRK2-202ENST00000412104 SEC24BO95487 1268 aa30.92■■■□□ 2.54
VRK2-202ENST00000412104 FAM208AQ9UK61 1670 aaKnown RBP30.92■■■□□ 2.54
VRK2-202ENST00000412104 SLC4A2P04920 1241 aa30.91■■■□□ 2.54
VRK2-202ENST00000412104 DCCP43146 1447 aa30.91■■■□□ 2.54
VRK2-202ENST00000412104 PLEKHG5O94827 1062 aa30.89■■■□□ 2.54
VRK2-202ENST00000412104 SIRT2Q8IXJ6 389 aa30.89■■■□□ 2.54
VRK2-202ENST00000412104 LRRC59Q96AG4 307 aaKnown RBP30.89■■■□□ 2.54
VRK2-202ENST00000412104 GCC1Q96CN9 775 aa30.89■■■□□ 2.54
VRK2-202ENST00000412104 BABAM1Q9NWV8 329 aa30.89■■■□□ 2.54
VRK2-202ENST00000412104 ATF3P18847 181 aa30.88■■■□□ 2.53
VRK2-202ENST00000412104 NCAPD2Q15021 1401 aa30.88■■■□□ 2.53
VRK2-202ENST00000412104 NCOA3Q9Y6Q9 1424 aa30.88■■■□□ 2.53
VRK2-202ENST00000412104 LMO7Q8WWI1 1683 aa30.88■■■□□ 2.53
VRK2-202ENST00000412104 MED1Q15648 1581 aaPredicted RBP30.87■■■□□ 2.53
VRK2-202ENST00000412104 TAF7Q15545 349 aaPredicted RBP30.87■■■□□ 2.53
VRK2-202ENST00000412104 CHD1LQ86WJ1 897 aa30.87■■■□□ 2.53
VRK2-202ENST00000412104 CAMTA1Q9Y6Y1 1673 aa30.87■■■□□ 2.53
VRK2-202ENST00000412104 CEMIPQ8WUJ3 1361 aa30.87■■■□□ 2.53
VRK2-202ENST00000412104 LNPKQ9C0E8 428 aa30.85■■■□□ 2.53
VRK2-202ENST00000412104 G2E3Q7L622 706 aa30.84■■■□□ 2.53
VRK2-202ENST00000412104 SOS1Q07889 1333 aaPredicted RBP30.83■■■□□ 2.53
VRK2-202ENST00000412104 ANKRD24Q8TF21 1146 aa30.83■■■□□ 2.53
VRK2-202ENST00000412104 STK31Q9BXU1 1019 aa30.83■■■□□ 2.53
VRK2-202ENST00000412104 ATP10DQ9P241 1426 aa30.82■■■□□ 2.52
VRK2-202ENST00000412104 RGPD5Q99666 1765 aa30.82■■■□□ 2.52
VRK2-202ENST00000412104 HSPA2P54652 639 aa30.81■■■□□ 2.52
VRK2-202ENST00000412104 CCDC30Q5VVM6 783 aa30.81■■■□□ 2.52
VRK2-202ENST00000412104 CACNA1FO60840 1977 aa30.8■■■□□ 2.52
VRK2-202ENST00000412104 ANKRD45Q5TZF3 282 aa30.8■■■□□ 2.52
VRK2-202ENST00000412104 KDM3BQ7LBC6 1761 aa30.8■■■□□ 2.52
VRK2-202ENST00000412104 PLEKHO1Q53GL0 409 aaPredicted RBP30.79■■■□□ 2.52
VRK2-202ENST00000412104 AXIN2Q9Y2T1 843 aa30.79■■■□□ 2.52
VRK2-202ENST00000412104 AKAP4Q5JQC9 854 aa30.77■■■□□ 2.52
VRK2-202ENST00000412104 ZNF530Q6P9A1 599 aaPredicted RBP30.77■■■□□ 2.52
VRK2-202ENST00000412104 UPF2Q9HAU5 1272 aaKnown RBP30.77■■■□□ 2.52
VRK2-202ENST00000412104 PXDNQ92626 1479 aa30.77■■■□□ 2.52
VRK2-202ENST00000412104 MEIS3Q99687 375 aa30.77■■■□□ 2.52
VRK2-202ENST00000412104 LGR6Q9HBX8 967 aa30.77■■■□□ 2.52
VRK2-202ENST00000412104 F6X3S4 739 aa30.76■■■□□ 2.51
VRK2-202ENST00000412104 AMOTQ4VCS5 1084 aa30.76■■■□□ 2.51
VRK2-202ENST00000412104 CADPS2Q86UW7 1296 aa30.76■■■□□ 2.51
VRK2-202ENST00000412104 ANKRD44Q8N8A2 993 aa30.76■■■□□ 2.51
VRK2-202ENST00000412104 DDX17Q92841 729 aaKnown RBP30.76■■■□□ 2.51
VRK2-202ENST00000412104 SLC4A3P48751 1232 aa30.75■■■□□ 2.51
VRK2-202ENST00000412104 CCT4P50991 539 aaKnown RBP30.75■■■□□ 2.51
VRK2-202ENST00000412104 DAXXQ9UER7 740 aaPredicted RBP30.75■■■□□ 2.51
VRK2-202ENST00000412104 XIRP1Q702N8 1843 aaKnown RBP30.74■■■□□ 2.51
VRK2-202ENST00000412104 FLIIQ13045 1269 aa30.74■■■□□ 2.51
VRK2-202ENST00000412104 CEP85Q6P2H3 762 aa30.73■■■□□ 2.51
VRK2-202ENST00000412104 SLC4A10Q6U841 1118 aa30.73■■■□□ 2.51
VRK2-202ENST00000412104 RPAP2Q8IXW5 612 aaPredicted RBP30.73■■■□□ 2.51
VRK2-202ENST00000412104 NECTIN2Q92692 538 aa30.73■■■□□ 2.51
VRK2-202ENST00000412104 TBC1D32Q96NH3 1257 aa30.73■■■□□ 2.51
VRK2-202ENST00000412104 N4BP2Q86UW6 1770 aaPredicted RBP30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms