RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 ZCRB1Q8TBF4 217 aaKnown RBP20.74■□□□□ 0.91
TRAPPC12-203ENST00000411973 SHANK3Q9BYB0 1731 aa20.74■□□□□ 0.91
TRAPPC12-203ENST00000411973 BCL9O00512 1426 aa20.73■□□□□ 0.91
TRAPPC12-203ENST00000411973 SULT6B1Q6IMI4 303 aa20.73■□□□□ 0.91
TRAPPC12-203ENST00000411973 FAM196AQ6ZSG2 479 aa20.73■□□□□ 0.91
TRAPPC12-203ENST00000411973 FAM182BQ5T319 152 aa20.72■□□□□ 0.91
TRAPPC12-203ENST00000411973 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
TRAPPC12-203ENST00000411973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.72■□□□□ 0.91
TRAPPC12-203ENST00000411973 NUDCQ9Y266 331 aa20.71■□□□□ 0.91
TRAPPC12-203ENST00000411973 UPF1Q92900 1129 aaKnown RBP eCLIP20.7■□□□□ 0.9
TRAPPC12-203ENST00000411973 U2SURPO15042 1029 aaKnown RBP20.69■□□□□ 0.9
TRAPPC12-203ENST00000411973 SBF2Q86WG5 1849 aa20.69■□□□□ 0.9
TRAPPC12-203ENST00000411973 ANP32CO43423 234 aa20.68■□□□□ 0.9
TRAPPC12-203ENST00000411973 SPG7Q9UQ90 795 aa20.68■□□□□ 0.9
TRAPPC12-203ENST00000411973 HMOX1P09601 288 aa20.67■□□□□ 0.9
TRAPPC12-203ENST00000411973 CCDC125Q86Z20 511 aa20.67■□□□□ 0.9
TRAPPC12-203ENST00000411973 DDX54Q8TDD1 881 aaKnown RBP20.67■□□□□ 0.9
TRAPPC12-203ENST00000411973 PCDH11XQ9BZA7 1347 aa20.67■□□□□ 0.9
TRAPPC12-203ENST00000411973 PCDH11YQ9BZA8 1340 aa20.67■□□□□ 0.9
TRAPPC12-203ENST00000411973 CYP27B1O15528 508 aa20.65■□□□□ 0.9
TRAPPC12-203ENST00000411973 AMOTQ4VCS5 1084 aa20.65■□□□□ 0.9
TRAPPC12-203ENST00000411973 PLEKHO1Q53GL0 409 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC12-203ENST00000411973 U2AF1L5P0DN76 240 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC12-203ENST00000411973 U2AF1Q01081 240 aaKnown RBP eCLIP20.64■□□□□ 0.89
TRAPPC12-203ENST00000411973 KAT6BQ8WYB5 2073 aa20.63■□□□□ 0.89
TRAPPC12-203ENST00000411973 FCHSD2O94868 740 aa20.63■□□□□ 0.89
TRAPPC12-203ENST00000411973 TNS1Q9HBL0 1735 aaKnown RBP20.62■□□□□ 0.89
TRAPPC12-203ENST00000411973 NKX1-1Q15270 411 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC12-203ENST00000411973 RSPH6AQ9H0K4 717 aa20.62■□□□□ 0.89
TRAPPC12-203ENST00000411973 IFNL2Q8IZJ0 200 aa20.61■□□□□ 0.89
TRAPPC12-203ENST00000411973 NHSQ6T4R5 1651 aa20.61■□□□□ 0.89
TRAPPC12-203ENST00000411973 TRIM37O94972 964 aa20.6■□□□□ 0.89
TRAPPC12-203ENST00000411973 PHKG2P15735 406 aa20.6■□□□□ 0.89
TRAPPC12-203ENST00000411973 BCL11BQ9C0K0 894 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC12-203ENST00000411973 DOT1LQ8TEK3 1739 aa20.58■□□□□ 0.89
TRAPPC12-203ENST00000411973 PRKAR2BP31323 418 aa20.58■□□□□ 0.89
TRAPPC12-203ENST00000411973 ZNF530Q6P9A1 599 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC12-203ENST00000411973 SF3B2Q13435 895 aaKnown RBP20.57■□□□□ 0.88
TRAPPC12-203ENST00000411973 KCNQ2O43526 872 aa20.56■□□□□ 0.88
TRAPPC12-203ENST00000411973 HSP90AB1P08238 724 aaKnown RBP20.56■□□□□ 0.88
TRAPPC12-203ENST00000411973 MTHFSDQ2M296 383 aaKnown RBP20.56■□□□□ 0.88
TRAPPC12-203ENST00000411973 ACSBG1Q96GR2 724 aa20.56■□□□□ 0.88
TRAPPC12-203ENST00000411973 TOGARAM1Q9Y4F4 1720 aa20.56■□□□□ 0.88
TRAPPC12-203ENST00000411973 AKAP4Q5JQC9 854 aa20.55■□□□□ 0.88
TRAPPC12-203ENST00000411973 C1orf141Q5JVX7 400 aa20.55■□□□□ 0.88
TRAPPC12-203ENST00000411973 PTF1AQ7RTS3 328 aa20.55■□□□□ 0.88
TRAPPC12-203ENST00000411973 PHACTR3Q96KR7 559 aa20.55■□□□□ 0.88
TRAPPC12-203ENST00000411973 PNNQ9H307 717 aaKnown RBP20.55■□□□□ 0.88
TRAPPC12-203ENST00000411973 CCDC184Q52MB2 194 aa20.54■□□□□ 0.88
TRAPPC12-203ENST00000411973 DCAF5Q96JK2 942 aa20.54■□□□□ 0.88
TRAPPC12-203ENST00000411973 PLEKHF1Q96S99 279 aa20.54■□□□□ 0.88
TRAPPC12-203ENST00000411973 ITGB4P16144 1822 aa20.54■□□□□ 0.88
TRAPPC12-203ENST00000411973 BTAF1O14981 1849 aa20.53■□□□□ 0.88
TRAPPC12-203ENST00000411973 APBA3O96018 575 aa20.53■□□□□ 0.88
TRAPPC12-203ENST00000411973 PRIM1P49642 420 aaKnown RBP20.53■□□□□ 0.88
TRAPPC12-203ENST00000411973 WDR43Q15061 677 aaKnown RBP eCLIP20.53■□□□□ 0.88
TRAPPC12-203ENST00000411973 GAS2L2Q8NHY3 880 aa20.53■□□□□ 0.88
TRAPPC12-203ENST00000411973 BAG6P46379 1132 aa20.52■□□□□ 0.88
TRAPPC12-203ENST00000411973 RGPD3A6NKT7 1758 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC12-203ENST00000411973 RGPD4Q7Z3J3 1758 aa20.51■□□□□ 0.87
TRAPPC12-203ENST00000411973 SCN11AQ9UI33 1791 aa20.51■□□□□ 0.87
TRAPPC12-203ENST00000411973 PLSCR1O15162 318 aa20.51■□□□□ 0.87
TRAPPC12-203ENST00000411973 KDM6AO15550 1401 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC12-203ENST00000411973 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
TRAPPC12-203ENST00000411973 VIRMAQ69YN4 1812 aaKnown RBP20.5■□□□□ 0.87
TRAPPC12-203ENST00000411973 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
TRAPPC12-203ENST00000411973 DIEXFQ68CQ4 756 aaKnown RBP20.5■□□□□ 0.87
TRAPPC12-203ENST00000411973 DEFB132Q7Z7B7 95 aa20.5■□□□□ 0.87
TRAPPC12-203ENST00000411973 SYTL4Q96C24 671 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC12-203ENST00000411973 ADAMTS8Q9UP79 889 aa20.5■□□□□ 0.87
TRAPPC12-203ENST00000411973 NEFMP07197 916 aa20.49■□□□□ 0.87
TRAPPC12-203ENST00000411973 MPRIPQ6WCQ1 1025 aa20.49■□□□□ 0.87
TRAPPC12-203ENST00000411973 MRS2Q9HD23 443 aa20.49■□□□□ 0.87
TRAPPC12-203ENST00000411973 GNAT3A8MTJ3 354 aa20.48■□□□□ 0.87
TRAPPC12-203ENST00000411973 EN1Q05925 392 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC12-203ENST00000411973 PNISRQ8TF01 805 aaKnown RBP20.48■□□□□ 0.87
TRAPPC12-203ENST00000411973 CAMKK2Q96RR4 588 aa20.48■□□□□ 0.87
TRAPPC12-203ENST00000411973 MAP3K5Q99683 1374 aa20.47■□□□□ 0.87
TRAPPC12-203ENST00000411973 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
TRAPPC12-203ENST00000411973 PIGBQ92521 554 aa20.46■□□□□ 0.87
TRAPPC12-203ENST00000411973 TMOD3Q9NYL9 352 aa20.46■□□□□ 0.87
TRAPPC12-203ENST00000411973 DLG5Q8TDM6 1919 aa20.46■□□□□ 0.87
TRAPPC12-203ENST00000411973 RNMTO43148 476 aaKnown RBP20.45■□□□□ 0.86
TRAPPC12-203ENST00000411973 LGR6Q9HBX8 967 aa20.45■□□□□ 0.86
TRAPPC12-203ENST00000411973 MRC1P22897 1456 aa20.44■□□□□ 0.86
TRAPPC12-203ENST00000411973 HTATSF1O43719 755 aaKnown RBP20.44■□□□□ 0.86
TRAPPC12-203ENST00000411973 EZH2Q15910 746 aaKnown RBP20.44■□□□□ 0.86
TRAPPC12-203ENST00000411973 NFE2L2Q16236 605 aa20.44■□□□□ 0.86
TRAPPC12-203ENST00000411973 RUNDC1Q96C34 613 aa20.44■□□□□ 0.86
TRAPPC12-203ENST00000411973 RREB1Q92766 1687 aa20.44■□□□□ 0.86
TRAPPC12-203ENST00000411973 CABP4P57796 275 aa20.43■□□□□ 0.86
TRAPPC12-203ENST00000411973 IL17REQ8NFR9 667 aa20.43■□□□□ 0.86
TRAPPC12-203ENST00000411973 LY75O60449 1722 aa20.42■□□□□ 0.86
TRAPPC12-203ENST00000411973 CEMIPQ8WUJ3 1361 aa20.42■□□□□ 0.86
TRAPPC12-203ENST00000411973 CCER2I3L3R5 266 aa20.41■□□□□ 0.86
TRAPPC12-203ENST00000411973 CCDC146Q8IYE0 955 aa20.41■□□□□ 0.86
TRAPPC12-203ENST00000411973 PROM2Q8N271 834 aa20.41■□□□□ 0.86
TRAPPC12-203ENST00000411973 NFATC2IPQ8NCF5 419 aa20.41■□□□□ 0.86
TRAPPC12-203ENST00000411973 SLC52A2Q9HAB3 445 aa20.41■□□□□ 0.86
TRAPPC12-203ENST00000411973 TXNRD1Q16881 649 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms