RNA–Protein interactions for RNA: ENST00000411836.1

LSM12P1-201, Transcript of LSM12 pseudogene 1, humanhuman

BASIC

Gene LSM12P1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12P1-201ENST00000411836 TNS1Q9HBL0 1735 aaKnown RBP27.63■■■□□ 2.01
LSM12P1-201ENST00000411836 SPG7Q9UQ90 795 aa27.61■■■□□ 2.01
LSM12P1-201ENST00000411836 CAMKK2Q96RR4 588 aa27.6■■■□□ 2.01
LSM12P1-201ENST00000411836 PCDH11XQ9BZA7 1347 aa27.6■■■□□ 2.01
LSM12P1-201ENST00000411836 PCDH11YQ9BZA8 1340 aa27.6■■■□□ 2.01
LSM12P1-201ENST00000411836 KCNQ2O43526 872 aa27.59■■■□□ 2.01
LSM12P1-201ENST00000411836 PTF1AQ7RTS3 328 aa27.59■■■□□ 2.01
LSM12P1-201ENST00000411836 IGSF1Q8N6C5 1336 aa27.59■■■□□ 2.01
LSM12P1-201ENST00000411836 PARD3Q8TEW0 1356 aa27.59■■■□□ 2.01
LSM12P1-201ENST00000411836 SYTL4Q96C24 671 aaPredicted RBP27.58■■■□□ 2.01
LSM12P1-201ENST00000411836 NCAPD2Q15021 1401 aa27.58■■■□□ 2
LSM12P1-201ENST00000411836 IL13P35225 146 aa27.57■■■□□ 2
LSM12P1-201ENST00000411836 DDX10Q13206 875 aaKnown RBP27.57■■■□□ 2
LSM12P1-201ENST00000411836 SBF2Q86WG5 1849 aa27.57■■■□□ 2
LSM12P1-201ENST00000411836 DIAPH1O60610 1272 aaKnown RBP27.56■■■□□ 2
LSM12P1-201ENST00000411836 PLSCR1O15162 318 aa27.55■■■□□ 2
LSM12P1-201ENST00000411836 SULT6B1Q6IMI4 303 aa27.54■■■□□ 2
LSM12P1-201ENST00000411836 CFAP53Q96M91 514 aa27.54■■■□□ 2
LSM12P1-201ENST00000411836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.54■■■□□ 2
LSM12P1-201ENST00000411836 PRIM1P49642 420 aaKnown RBP27.52■■■□□ 2
LSM12P1-201ENST00000411836 KAT6BQ8WYB5 2073 aa27.52■■■□□ 2
LSM12P1-201ENST00000411836 PLEKHO1Q53GL0 409 aaPredicted RBP27.51■■□□□ 1.99
LSM12P1-201ENST00000411836 AEBP1Q8IUX7 1158 aa27.51■■□□□ 1.99
LSM12P1-201ENST00000411836 CYP27B1O15528 508 aa27.5■■□□□ 1.99
LSM12P1-201ENST00000411836 PPP2R1AP30153 589 aa27.5■■□□□ 1.99
LSM12P1-201ENST00000411836 NHSQ6T4R5 1651 aa27.49■■□□□ 1.99
LSM12P1-201ENST00000411836 NBPF14Q5TI25 921 aa27.49■■□□□ 1.99
LSM12P1-201ENST00000411836 SHANK3Q9BYB0 1731 aa27.48■■□□□ 1.99
LSM12P1-201ENST00000411836 IFNL2Q8IZJ0 200 aa27.48■■□□□ 1.99
LSM12P1-201ENST00000411836 U2SURPO15042 1029 aaKnown RBP27.47■■□□□ 1.99
LSM12P1-201ENST00000411836 AMOTQ4VCS5 1084 aa27.47■■□□□ 1.99
LSM12P1-201ENST00000411836 HMOX1P09601 288 aa27.46■■□□□ 1.99
LSM12P1-201ENST00000411836 PSDA5PKW4 1024 aaPredicted RBP27.45■■□□□ 1.98
LSM12P1-201ENST00000411836 TXNRD1Q16881 649 aa27.45■■□□□ 1.98
LSM12P1-201ENST00000411836 PLEKHG2Q9H7P9 1386 aa27.45■■□□□ 1.98
LSM12P1-201ENST00000411836 PKD1L3Q7Z443 1732 aa27.44■■□□□ 1.98
LSM12P1-201ENST00000411836 PHKG2P15735 406 aa27.44■■□□□ 1.98
LSM12P1-201ENST00000411836 R3HDM1Q15032 1099 aaKnown RBP27.43■■□□□ 1.98
LSM12P1-201ENST00000411836 ZNF530Q6P9A1 599 aaPredicted RBP27.43■■□□□ 1.98
LSM12P1-201ENST00000411836 NUDCQ9Y266 331 aa27.43■■□□□ 1.98
LSM12P1-201ENST00000411836 DOT1LQ8TEK3 1739 aa27.42■■□□□ 1.98
LSM12P1-201ENST00000411836 C1orf141Q5JVX7 400 aa27.42■■□□□ 1.98
LSM12P1-201ENST00000411836 MPRIPQ6WCQ1 1025 aa27.42■■□□□ 1.98
LSM12P1-201ENST00000411836 KDRP35968 1356 aa27.42■■□□□ 1.98
LSM12P1-201ENST00000411836 HSP90AB1P08238 724 aaKnown RBP27.41■■□□□ 1.98
LSM12P1-201ENST00000411836 NKX1-1Q15270 411 aaPredicted RBP27.41■■□□□ 1.98
LSM12P1-201ENST00000411836 BTAF1O14981 1849 aa27.4■■□□□ 1.98
LSM12P1-201ENST00000411836 PROM2Q8N271 834 aa27.4■■□□□ 1.98
LSM12P1-201ENST00000411836 RGPD3A6NKT7 1758 aaPredicted RBP27.4■■□□□ 1.98
LSM12P1-201ENST00000411836 RGPD4Q7Z3J3 1758 aa27.4■■□□□ 1.98
LSM12P1-201ENST00000411836 RREB1Q92766 1687 aa27.39■■□□□ 1.97
LSM12P1-201ENST00000411836 COL3A1P02461 1466 aaPredicted RBP27.38■■□□□ 1.97
LSM12P1-201ENST00000411836 RALBP1Q15311 655 aa27.38■■□□□ 1.97
LSM12P1-201ENST00000411836 TMOD3Q9NYL9 352 aa27.37■■□□□ 1.97
LSM12P1-201ENST00000411836 NUP188Q5SRE5 1749 aa27.36■■□□□ 1.97
LSM12P1-201ENST00000411836 ZNF316A6NFI3 1004 aaPredicted RBP27.35■■□□□ 1.97
LSM12P1-201ENST00000411836 DCAF5Q96JK2 942 aa27.35■■□□□ 1.97
LSM12P1-201ENST00000411836 STK32BQ9NY57 414 aa27.35■■□□□ 1.97
LSM12P1-201ENST00000411836 U2AF1L5P0DN76 240 aaPredicted RBP27.34■■□□□ 1.97
LSM12P1-201ENST00000411836 U2AF1Q01081 240 aaKnown RBP eCLIP27.34■■□□□ 1.97
LSM12P1-201ENST00000411836 SLC27A3Q5K4L6 730 aa27.34■■□□□ 1.97
LSM12P1-201ENST00000411836 PIGBQ92521 554 aa27.32■■□□□ 1.96
LSM12P1-201ENST00000411836 SMARCC1Q92922 1105 aaPredicted RBP27.32■■□□□ 1.96
LSM12P1-201ENST00000411836 ERVV-2B6SEH9 535 aa27.3■■□□□ 1.96
LSM12P1-201ENST00000411836 CABP4P57796 275 aa27.3■■□□□ 1.96
LSM12P1-201ENST00000411836 AKAP4Q5JQC9 854 aa27.3■■□□□ 1.96
LSM12P1-201ENST00000411836 CCNL1Q9UK58 526 aaPredicted RBP27.3■■□□□ 1.96
LSM12P1-201ENST00000411836 ANO8Q9HCE9 1232 aaPredicted RBP27.29■■□□□ 1.96
LSM12P1-201ENST00000411836 MTHFSDQ2M296 383 aaKnown RBP27.28■■□□□ 1.96
LSM12P1-201ENST00000411836 LRRC4BQ9NT99 713 aa27.28■■□□□ 1.96
LSM12P1-201ENST00000411836 TOGARAM1Q9Y4F4 1720 aa27.27■■□□□ 1.96
LSM12P1-201ENST00000411836 PALLDQ8WX93 1383 aa27.27■■□□□ 1.96
LSM12P1-201ENST00000411836 PRKAR2BP31323 418 aa27.27■■□□□ 1.96
LSM12P1-201ENST00000411836 KCNQ4P56696 695 aa27.27■■□□□ 1.96
LSM12P1-201ENST00000411836 SLC15A2Q16348 729 aa27.27■■□□□ 1.96
LSM12P1-201ENST00000411836 MYBBP1AQ9BQG0 1328 aaKnown RBP27.26■■□□□ 1.95
LSM12P1-201ENST00000411836 HMGB2P26583 209 aaKnown RBP27.25■■□□□ 1.95
LSM12P1-201ENST00000411836 GAS2L2Q8NHY3 880 aa27.25■■□□□ 1.95
LSM12P1-201ENST00000411836 ITGB4P16144 1822 aa27.25■■□□□ 1.95
LSM12P1-201ENST00000411836 FCHSD2O94868 740 aa27.24■■□□□ 1.95
LSM12P1-201ENST00000411836 RSPH6AQ9H0K4 717 aa27.24■■□□□ 1.95
LSM12P1-201ENST00000411836 KDM6AO15550 1401 aaPredicted RBP27.24■■□□□ 1.95
LSM12P1-201ENST00000411836 NEFMP07197 916 aa27.23■■□□□ 1.95
LSM12P1-201ENST00000411836 ASAP1Q9ULH1 1129 aa27.23■■□□□ 1.95
LSM12P1-201ENST00000411836 NFATC2IPQ8NCF5 419 aa27.2■■□□□ 1.94
LSM12P1-201ENST00000411836 ATG3Q9NT62 314 aa27.2■■□□□ 1.94
LSM12P1-201ENST00000411836 PRKRIP1Q9H875 184 aaPredicted RBP27.19■■□□□ 1.94
LSM12P1-201ENST00000411836 LGR6Q9HBX8 967 aa27.19■■□□□ 1.94
LSM12P1-201ENST00000411836 TFCP2L1Q9NZI6 479 aa27.19■■□□□ 1.94
LSM12P1-201ENST00000411836 LY75O60449 1722 aa27.19■■□□□ 1.94
LSM12P1-201ENST00000411836 LOC102724428A0A0B4J2F2 783 aa27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 GNAT3A8MTJ3 354 aa27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 RNMTO43148 476 aaKnown RBP27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 SIK1P57059 783 aa27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 ZNF827Q17R98 1081 aa27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 PHACTR3Q96KR7 559 aa27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 RBM42Q9BTD8 480 aaKnown RBP27.17■■□□□ 1.94
LSM12P1-201ENST00000411836 PNNQ9H307 717 aaKnown RBP27.17■■□□□ 1.94
LSM12P1-201ENST00000411836 AKT1S1Q96B36 256 aa27.16■■□□□ 1.94
LSM12P1-201ENST00000411836 MAP3K5Q99683 1374 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms