RNA–Protein interactions for RNA: ENST00000410019.3

CDCA7-203, Transcript of cell division cycle associated 7, humanhuman

TSL 2 BASIC

Gene CDCA7, Length 1,488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-203ENST00000410019 NLRP2Q9NX02 1062 aa18.48■□□□□ 0.55
CDCA7-203ENST00000410019 TOM1L2Q6ZVM7 507 aa18.47■□□□□ 0.55
CDCA7-203ENST00000410019 C8orf37Q96NL8 207 aa18.47■□□□□ 0.55
CDCA7-203ENST00000410019 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
CDCA7-203ENST00000410019 CRB1P82279 1406 aa18.47■□□□□ 0.55
CDCA7-203ENST00000410019 PLEKHG2Q9H7P9 1386 aa18.47■□□□□ 0.55
CDCA7-203ENST00000410019 LARP1Q6PKG0 1096 aaKnown RBP18.46■□□□□ 0.55
CDCA7-203ENST00000410019 NRAPQ86VF7 1730 aa18.46■□□□□ 0.55
CDCA7-203ENST00000410019 NEFMP07197 916 aa18.46■□□□□ 0.54
CDCA7-203ENST00000410019 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.54
CDCA7-203ENST00000410019 CCDC146Q8IYE0 955 aa18.46■□□□□ 0.54
CDCA7-203ENST00000410019 BCL9LQ86UU0 1499 aa18.45■□□□□ 0.54
CDCA7-203ENST00000410019 MEX3CQ5U5Q3 659 aaKnown RBP18.45■□□□□ 0.54
CDCA7-203ENST00000410019 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
CDCA7-203ENST00000410019 USHBP1Q8N6Y0 703 aa18.45■□□□□ 0.54
CDCA7-203ENST00000410019 MAPK8IP3Q9UPT6 1336 aa18.44■□□□□ 0.54
CDCA7-203ENST00000410019 APAF1O14727 1248 aa18.44■□□□□ 0.54
CDCA7-203ENST00000410019 PHACTR3Q96KR7 559 aa18.44■□□□□ 0.54
CDCA7-203ENST00000410019 PPP4R2Q9NY27 417 aa18.42■□□□□ 0.54
CDCA7-203ENST00000410019 USP21Q9UK80 565 aa18.42■□□□□ 0.54
CDCA7-203ENST00000410019 THRAP3Q9Y2W1 955 aaKnown RBP18.42■□□□□ 0.54
CDCA7-203ENST00000410019 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
CDCA7-203ENST00000410019 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.41■□□□□ 0.54
CDCA7-203ENST00000410019 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
CDCA7-203ENST00000410019 VPS72Q15906 364 aa18.41■□□□□ 0.54
CDCA7-203ENST00000410019 RAPGEF4Q8WZA2 1011 aa18.41■□□□□ 0.54
CDCA7-203ENST00000410019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.41■□□□□ 0.545e-7■■■■□ 19.4
CDCA7-203ENST00000410019 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
CDCA7-203ENST00000410019 SPATA31A1Q5TZJ5 1347 aa18.4■□□□□ 0.54
CDCA7-203ENST00000410019 SPATA31A5Q5VU36 1347 aa18.4■□□□□ 0.54
CDCA7-203ENST00000410019 SPATA31A7Q8IWB4 1347 aa18.4■□□□□ 0.54
CDCA7-203ENST00000410019 TATP17735 454 aaPredicted RBP18.39■□□□□ 0.54
CDCA7-203ENST00000410019 NFE2L2Q16236 605 aa18.39■□□□□ 0.54
CDCA7-203ENST00000410019 CCDC27Q2M243 656 aa18.39■□□□□ 0.54
CDCA7-203ENST00000410019 AFF2P51816 1311 aa18.39■□□□□ 0.53
CDCA7-203ENST00000410019 PLEKHO1Q53GL0 409 aaPredicted RBP18.39■□□□□ 0.53
CDCA7-203ENST00000410019 GAS2L2Q8NHY3 880 aa18.39■□□□□ 0.53
CDCA7-203ENST00000410019 SALL2Q9Y467 1007 aaPredicted RBP18.39■□□□□ 0.53
CDCA7-203ENST00000410019 IL2RBP14784 551 aa18.38■□□□□ 0.53
CDCA7-203ENST00000410019 MTHFSDQ2M296 383 aaKnown RBP18.38■□□□□ 0.53
CDCA7-203ENST00000410019 CDCA7Q9BWT1 371 aaPredicted RBP18.38■□□□□ 0.53
CDCA7-203ENST00000410019 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
CDCA7-203ENST00000410019 RIPK4P57078 832 aa18.37■□□□□ 0.53
CDCA7-203ENST00000410019 GOLGA2Q08379 1002 aa18.37■□□□□ 0.53
CDCA7-203ENST00000410019 BARGINQ6ZT62 677 aa18.37■□□□□ 0.53
CDCA7-203ENST00000410019 DSG3P32926 999 aa18.36■□□□□ 0.53
CDCA7-203ENST00000410019 HTATSF1O43719 755 aaKnown RBP18.35■□□□□ 0.53
CDCA7-203ENST00000410019 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
CDCA7-203ENST00000410019 TRPC5Q9UL62 973 aaPredicted RBP18.35■□□□□ 0.53
CDCA7-203ENST00000410019 SPG7Q9UQ90 795 aa18.35■□□□□ 0.53
CDCA7-203ENST00000410019 MEGF6O75095 1541 aa18.35■□□□□ 0.53
CDCA7-203ENST00000410019 OVOS2A0A0G2JMS6 1433 aa18.35■□□□□ 0.53
CDCA7-203ENST00000410019 DISP2A7MBM2 1401 aa18.35■□□□□ 0.53
CDCA7-203ENST00000410019 TRIM35Q9UPQ4 493 aa18.34■□□□□ 0.53
CDCA7-203ENST00000410019 ZNF521Q96K83 1311 aa18.34■□□□□ 0.53
CDCA7-203ENST00000410019 PARP4Q9UKK3 1724 aaKnown RBP18.34■□□□□ 0.53
CDCA7-203ENST00000410019 NEUROD2Q15784 382 aa18.33■□□□□ 0.53
CDCA7-203ENST00000410019 WWC1Q8IX03 1113 aa18.33■□□□□ 0.53
CDCA7-203ENST00000410019 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.53
CDCA7-203ENST00000410019 DLG5Q8TDM6 1919 aa18.33■□□□□ 0.53
CDCA7-203ENST00000410019 ATRNO75882 1429 aa18.33■□□□□ 0.52
CDCA7-203ENST00000410019 IRX6P78412 446 aaPredicted RBP18.33■□□□□ 0.52
CDCA7-203ENST00000410019 LMOD3Q0VAK6 560 aa18.33■□□□□ 0.52
CDCA7-203ENST00000410019 AKAP4Q5JQC9 854 aa18.33■□□□□ 0.52
CDCA7-203ENST00000410019 ZNF772Q68DY9 489 aaPredicted RBP18.33■□□□□ 0.52
CDCA7-203ENST00000410019 ZCRB1Q8TBF4 217 aaKnown RBP18.33■□□□□ 0.52
CDCA7-203ENST00000410019 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.52
CDCA7-203ENST00000410019 CCDC9Q9Y3X0 531 aaKnown RBP18.33■□□□□ 0.52
CDCA7-203ENST00000410019 PKD1L3Q7Z443 1732 aa18.32■□□□□ 0.52
CDCA7-203ENST00000410019 ABCB7O75027 752 aa18.32■□□□□ 0.52
CDCA7-203ENST00000410019 WDR63Q8IWG1 891 aa18.32■□□□□ 0.52
CDCA7-203ENST00000410019 QTRT2Q9H974 415 aaKnown RBP18.32■□□□□ 0.52
CDCA7-203ENST00000410019 SENP3-EIF4A1A0A087X0R7 540 aa18.31■□□□□ 0.52
CDCA7-203ENST00000410019 GNAT3A8MTJ3 354 aa18.31■□□□□ 0.52
CDCA7-203ENST00000410019 E9PSI1 815 aa18.31■□□□□ 0.52
CDCA7-203ENST00000410019 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
CDCA7-203ENST00000410019 RRP1P56182 461 aaKnown RBP18.31■□□□□ 0.52
CDCA7-203ENST00000410019 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
CDCA7-203ENST00000410019 WNK3Q9BYP7 1800 aa18.3■□□□□ 0.52
CDCA7-203ENST00000410019 EXOC5O00471 708 aa18.29■□□□□ 0.52
CDCA7-203ENST00000410019 ZNF530Q6P9A1 599 aaPredicted RBP18.29■□□□□ 0.52
CDCA7-203ENST00000410019 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.29■□□□□ 0.52
CDCA7-203ENST00000410019 C1orf141Q5JVX7 400 aa18.28■□□□□ 0.52
CDCA7-203ENST00000410019 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
CDCA7-203ENST00000410019 CDCA7LQ96GN5 454 aa18.28■□□□□ 0.52
CDCA7-203ENST00000410019 MAP3K5Q99683 1374 aa18.28■□□□□ 0.52
CDCA7-203ENST00000410019 PCDH11XQ9BZA7 1347 aa18.27■□□□□ 0.52
CDCA7-203ENST00000410019 PCDH11YQ9BZA8 1340 aa18.27■□□□□ 0.52
CDCA7-203ENST00000410019 CYP27B1O15528 508 aa18.27■□□□□ 0.52
CDCA7-203ENST00000410019 PHKG2P15735 406 aa18.27■□□□□ 0.52
CDCA7-203ENST00000410019 IL16Q14005 1332 aa18.27■□□□□ 0.51
CDCA7-203ENST00000410019 HSP90AB1P08238 724 aaKnown RBP18.26■□□□□ 0.51
CDCA7-203ENST00000410019 CALD1Q05682 793 aaKnown RBP18.26■□□□□ 0.51
CDCA7-203ENST00000410019 SLFN5Q08AF3 891 aa18.26■□□□□ 0.51
CDCA7-203ENST00000410019 NKX1-1Q15270 411 aaPredicted RBP18.26■□□□□ 0.51
CDCA7-203ENST00000410019 GLI3P10071 1580 aa18.26■□□□□ 0.51
CDCA7-203ENST00000410019 DDB1Q16531 1140 aa18.26■□□□□ 0.51
CDCA7-203ENST00000410019 FAM98CQ17RN3 349 aaKnown RBP18.26■□□□□ 0.51
CDCA7-203ENST00000410019 IL17REQ8NFR9 667 aa18.26■□□□□ 0.51
CDCA7-203ENST00000410019 DUSP27Q5VZP5 1158 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms