RNA–Protein interactions for RNA: ENST00000409751.1

RAB1A-202, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB1A, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-202ENST00000409751 HMOX1P09601 288 aa28.63■■■□□ 2.17
RAB1A-202ENST00000409751 NUDCQ9Y266 331 aa28.63■■■□□ 2.17
RAB1A-202ENST00000409751 PKD1L3Q7Z443 1732 aa28.61■■■□□ 2.17
RAB1A-202ENST00000409751 ZCRB1Q8TBF4 217 aaKnown RBP28.58■■■□□ 2.17
RAB1A-202ENST00000409751 DDX54Q8TDD1 881 aaKnown RBP28.58■■■□□ 2.17
RAB1A-202ENST00000409751 U2AF1L5P0DN76 240 aaPredicted RBP28.57■■■□□ 2.16
RAB1A-202ENST00000409751 U2AF1Q01081 240 aaKnown RBP eCLIP28.57■■■□□ 2.16
RAB1A-202ENST00000409751 KDRP35968 1356 aa28.55■■■□□ 2.16
RAB1A-202ENST00000409751 MARCH10Q8NA82 808 aaPredicted RBP28.55■■■□□ 2.16
RAB1A-202ENST00000409751 SPG7Q9UQ90 795 aa28.54■■■□□ 2.16
RAB1A-202ENST00000409751 PCDH11XQ9BZA7 1347 aa28.52■■■□□ 2.16
RAB1A-202ENST00000409751 PCDH11YQ9BZA8 1340 aa28.52■■■□□ 2.16
RAB1A-202ENST00000409751 SBF2Q86WG5 1849 aa28.51■■■□□ 2.15
RAB1A-202ENST00000409751 KAT6BQ8WYB5 2073 aa28.51■■■□□ 2.15
RAB1A-202ENST00000409751 DIEXFQ68CQ4 756 aaKnown RBP28.5■■■□□ 2.15
RAB1A-202ENST00000409751 FAM196AQ6ZSG2 479 aa28.5■■■□□ 2.15
RAB1A-202ENST00000409751 DOT1LQ8TEK3 1739 aa28.5■■■□□ 2.15
RAB1A-202ENST00000409751 PLEKHO1Q53GL0 409 aaPredicted RBP28.49■■■□□ 2.15
RAB1A-202ENST00000409751 WDR43Q15061 677 aaKnown RBP eCLIP28.48■■■□□ 2.15
RAB1A-202ENST00000409751 PRKAR2BP31323 418 aa28.47■■■□□ 2.15
RAB1A-202ENST00000409751 AMOTQ4VCS5 1084 aa28.45■■■□□ 2.15
RAB1A-202ENST00000409751 ZNF530Q6P9A1 599 aaPredicted RBP28.45■■■□□ 2.15
RAB1A-202ENST00000409751 RSPH6AQ9H0K4 717 aa28.45■■■□□ 2.15
RAB1A-202ENST00000409751 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.45■■■□□ 2.15
RAB1A-202ENST00000409751 PLEKHG2Q9H7P9 1386 aa28.45■■■□□ 2.14
RAB1A-202ENST00000409751 CCDC184Q52MB2 194 aa28.44■■■□□ 2.14
RAB1A-202ENST00000409751 ACSBG1Q96GR2 724 aa28.44■■■□□ 2.14
RAB1A-202ENST00000409751 MRS2Q9HD23 443 aa28.44■■■□□ 2.14
RAB1A-202ENST00000409751 TNS1Q9HBL0 1735 aaKnown RBP28.44■■■□□ 2.14
RAB1A-202ENST00000409751 CYP27B1O15528 508 aa28.43■■■□□ 2.14
RAB1A-202ENST00000409751 EP400Q96L91 3159 aa28.43■■■□□ 2.14
RAB1A-202ENST00000409751 NHSQ6T4R5 1651 aa28.43■■■□□ 2.14
RAB1A-202ENST00000409751 TRIM37O94972 964 aa28.43■■■□□ 2.14
RAB1A-202ENST00000409751 C1orf141Q5JVX7 400 aa28.43■■■□□ 2.14
RAB1A-202ENST00000409751 IFNL2Q8IZJ0 200 aa28.43■■■□□ 2.14
RAB1A-202ENST00000409751 VIRMAQ69YN4 1812 aaKnown RBP28.42■■■□□ 2.14
RAB1A-202ENST00000409751 FCHSD2O94868 740 aa28.42■■■□□ 2.14
RAB1A-202ENST00000409751 NEFMP07197 916 aa28.42■■■□□ 2.14
RAB1A-202ENST00000409751 UPF1Q92900 1129 aaKnown RBP eCLIP28.42■■■□□ 2.142e-32■■■■□ 19.8
RAB1A-202ENST00000409751 TOGARAM1Q9Y4F4 1720 aa28.41■■■□□ 2.14
RAB1A-202ENST00000409751 SOCS7O14512 581 aa28.41■■■□□ 2.14
RAB1A-202ENST00000409751 PHKG2P15735 406 aa28.41■■■□□ 2.14
RAB1A-202ENST00000409751 SF3B2Q13435 895 aaKnown RBP28.41■■■□□ 2.14
RAB1A-202ENST00000409751 SYTL4Q96C24 671 aaPredicted RBP28.4■■■□□ 2.14
RAB1A-202ENST00000409751 MTHFSDQ2M296 383 aaKnown RBP28.39■■■□□ 2.13
RAB1A-202ENST00000409751 BCL9O00512 1426 aa28.38■■■□□ 2.13
RAB1A-202ENST00000409751 MAPK8IP3Q9UPT6 1336 aa28.37■■■□□ 2.13
RAB1A-202ENST00000409751 ITGB4P16144 1822 aa28.37■■■□□ 2.13
RAB1A-202ENST00000409751 PHACTR3Q96KR7 559 aa28.37■■■□□ 2.13
RAB1A-202ENST00000409751 PNNQ9H307 717 aaKnown RBP28.37■■■□□ 2.13
RAB1A-202ENST00000409751 BTAF1O14981 1849 aa28.36■■■□□ 2.13
RAB1A-202ENST00000409751 GAS2L2Q8NHY3 880 aa28.35■■■□□ 2.13
RAB1A-202ENST00000409751 KCNQ2O43526 872 aa28.34■■■□□ 2.13
RAB1A-202ENST00000409751 CCDC146Q8IYE0 955 aa28.34■■■□□ 2.13
RAB1A-202ENST00000409751 ADAMTS8Q9UP79 889 aa28.34■■■□□ 2.13
RAB1A-202ENST00000409751 SCN11AQ9UI33 1791 aa28.33■■■□□ 2.13
RAB1A-202ENST00000409751 DLG5Q8TDM6 1919 aa28.33■■■□□ 2.13
RAB1A-202ENST00000409751 HSP90AB1P08238 724 aaKnown RBP28.33■■■□□ 2.13
RAB1A-202ENST00000409751 AKAP4Q5JQC9 854 aa28.33■■■□□ 2.13
RAB1A-202ENST00000409751 MPRIPQ6WCQ1 1025 aa28.32■■■□□ 2.12
RAB1A-202ENST00000409751 PTF1AQ7RTS3 328 aa28.32■■■□□ 2.12
RAB1A-202ENST00000409751 CCDC125Q86Z20 511 aa28.32■■■□□ 2.12
RAB1A-202ENST00000409751 APBA3O96018 575 aa28.31■■■□□ 2.12
RAB1A-202ENST00000409751 PRIM1P49642 420 aaKnown RBP28.31■■■□□ 2.12
RAB1A-202ENST00000409751 BCL11BQ9C0K0 894 aaPredicted RBP28.31■■■□□ 2.12
RAB1A-202ENST00000409751 KDM6AO15550 1401 aaPredicted RBP28.3■■■□□ 2.12
RAB1A-202ENST00000409751 NKX1-1Q15270 411 aaPredicted RBP28.3■■■□□ 2.12
RAB1A-202ENST00000409751 MAP3K5Q99683 1374 aa28.29■■■□□ 2.12
RAB1A-202ENST00000409751 DCAF5Q96JK2 942 aa28.29■■■□□ 2.12
RAB1A-202ENST00000409751 PLEKHF1Q96S99 279 aa28.29■■■□□ 2.12
RAB1A-202ENST00000409751 BAG6P46379 1132 aa28.28■■■□□ 2.12
RAB1A-202ENST00000409751 DEFB132Q7Z7B7 95 aa28.27■■■□□ 2.12
RAB1A-202ENST00000409751 GNAT3A8MTJ3 354 aa28.26■■■□□ 2.11
RAB1A-202ENST00000409751 MIER1Q8N108 512 aa28.26■■■□□ 2.11
RAB1A-202ENST00000409751 FAM9BQ8IZU0 186 aa28.25■■■□□ 2.11
RAB1A-202ENST00000409751 PNISRQ8TF01 805 aaKnown RBP28.25■■■□□ 2.11
RAB1A-202ENST00000409751 RUNDC1Q96C34 613 aa28.25■■■□□ 2.11
RAB1A-202ENST00000409751 TMOD3Q9NYL9 352 aa28.25■■■□□ 2.11
RAB1A-202ENST00000409751 EN1Q05925 392 aaPredicted RBP28.23■■■□□ 2.11
RAB1A-202ENST00000409751 CABP4P57796 275 aa28.22■■■□□ 2.11
RAB1A-202ENST00000409751 NFE2L2Q16236 605 aa28.22■■■□□ 2.11
RAB1A-202ENST00000409751 RTF1Q92541 710 aaKnown RBP28.22■■■□□ 2.11
RAB1A-202ENST00000409751 LGR6Q9HBX8 967 aa28.22■■■□□ 2.11
RAB1A-202ENST00000409751 ADAMTS7Q9UKP4 1686 aa28.22■■■□□ 2.11
RAB1A-202ENST00000409751 RGPD3A6NKT7 1758 aaPredicted RBP28.21■■■□□ 2.11
RAB1A-202ENST00000409751 RGPD4Q7Z3J3 1758 aa28.21■■■□□ 2.11
RAB1A-202ENST00000409751 RNMTO43148 476 aaKnown RBP28.21■■■□□ 2.11
RAB1A-202ENST00000409751 ERVV-2B6SEH9 535 aa28.2■■■□□ 2.11
RAB1A-202ENST00000409751 CCER2I3L3R5 266 aa28.2■■■□□ 2.11
RAB1A-202ENST00000409751 RRP7AQ9Y3A4 280 aaKnown RBP28.2■■■□□ 2.11
RAB1A-202ENST00000409751 NEUROD2Q15784 382 aa28.19■■■□□ 2.1
RAB1A-202ENST00000409751 PIGBQ92521 554 aa28.18■■■□□ 2.1
RAB1A-202ENST00000409751 EZH2Q15910 746 aaKnown RBP28.18■■■□□ 2.1
RAB1A-202ENST00000409751 MCM10Q7L590 875 aa28.18■■■□□ 2.1
RAB1A-202ENST00000409751 TMPOP42166 694 aaKnown RBP28.17■■■□□ 2.1
RAB1A-202ENST00000409751 RIPK4P57078 832 aa28.17■■■□□ 2.1
RAB1A-202ENST00000409751 TEFQ10587 303 aa28.17■■■□□ 2.1
RAB1A-202ENST00000409751 DCTN1Q14203 1278 aa28.17■■■□□ 2.1
RAB1A-202ENST00000409751 MRC1P22897 1456 aa28.16■■■□□ 2.1
RAB1A-202ENST00000409751 RREB1Q92766 1687 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms