RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ZCRB1Q8TBF4 217 aaKnown RBP42.29■■■■■ 4.36
TRAF3IP1-203ENST00000409739 RGPD3A6NKT7 1758 aaPredicted RBP42.29■■■■■ 4.36
TRAF3IP1-203ENST00000409739 RGPD4Q7Z3J3 1758 aa42.29■■■■■ 4.36
TRAF3IP1-203ENST00000409739 DOT1LQ8TEK3 1739 aa42.29■■■■■ 4.36
TRAF3IP1-203ENST00000409739 IGSF1Q8N6C5 1336 aa42.27■■■■■ 4.36
TRAF3IP1-203ENST00000409739 RREB1Q92766 1687 aa42.27■■■■■ 4.36
TRAF3IP1-203ENST00000409739 EN1Q05925 392 aaPredicted RBP42.25■■■■■ 4.35
TRAF3IP1-203ENST00000409739 DDX54Q8TDD1 881 aaKnown RBP42.25■■■■■ 4.35
TRAF3IP1-203ENST00000409739 APBA3O96018 575 aa42.24■■■■■ 4.35
TRAF3IP1-203ENST00000409739 BTAF1O14981 1849 aa42.23■■■■■ 4.35
TRAF3IP1-203ENST00000409739 PTF1AQ7RTS3 328 aa42.22■■■■■ 4.35
TRAF3IP1-203ENST00000409739 BCL11BQ9C0K0 894 aaPredicted RBP42.21■■■■■ 4.35
TRAF3IP1-203ENST00000409739 COL3A1P02461 1466 aaPredicted RBP42.21■■■■■ 4.35
TRAF3IP1-203ENST00000409739 IL13P35225 146 aa42.19■■■■■ 4.34
TRAF3IP1-203ENST00000409739 NUP188Q5SRE5 1749 aa42.18■■■■■ 4.34
TRAF3IP1-203ENST00000409739 PCDH11XQ9BZA7 1347 aa42.17■■■■■ 4.34
TRAF3IP1-203ENST00000409739 PCDH11YQ9BZA8 1340 aa42.17■■■■■ 4.34
TRAF3IP1-203ENST00000409739 ACSBG1Q96GR2 724 aa42.16■■■■■ 4.34
TRAF3IP1-203ENST00000409739 CAMKK2Q96RR4 588 aa42.16■■■■■ 4.34
TRAF3IP1-203ENST00000409739 PARD3Q8TEW0 1356 aa42.15■■■■■ 4.34
TRAF3IP1-203ENST00000409739 DDX10Q13206 875 aaKnown RBP42.15■■■■■ 4.34
TRAF3IP1-203ENST00000409739 EZH2Q15910 746 aaKnown RBP42.15■■■■■ 4.34
TRAF3IP1-203ENST00000409739 KCNQ2O43526 872 aa42.14■■■■■ 4.34
TRAF3IP1-203ENST00000409739 TOGARAM1Q9Y4F4 1720 aa42.14■■■■■ 4.34
TRAF3IP1-203ENST00000409739 PLEKHG2Q9H7P9 1386 aa42.14■■■■■ 4.34
TRAF3IP1-203ENST00000409739 KDRP35968 1356 aa42.11■■■■■ 4.33
TRAF3IP1-203ENST00000409739 AEBP1Q8IUX7 1158 aa42.1■■■■■ 4.33
TRAF3IP1-203ENST00000409739 ITGB4P16144 1822 aa42.09■■■■■ 4.33
TRAF3IP1-203ENST00000409739 CYP27B1O15528 508 aa42.08■■■■■ 4.33
TRAF3IP1-203ENST00000409739 DIAPH1O60610 1272 aaKnown RBP42.08■■■■■ 4.33
TRAF3IP1-203ENST00000409739 PPP2R1AP30153 589 aa42.08■■■■■ 4.33
TRAF3IP1-203ENST00000409739 SPG7Q9UQ90 795 aa42.08■■■■■ 4.33
TRAF3IP1-203ENST00000409739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP42.07■■■■■ 4.33
TRAF3IP1-203ENST00000409739 PLSCR1O15162 318 aa42.05■■■■■ 4.32
TRAF3IP1-203ENST00000409739 SULT6B1Q6IMI4 303 aa42.05■■■■■ 4.32
TRAF3IP1-203ENST00000409739 PRIM1P49642 420 aaKnown RBP41.98■■■■■ 4.31
TRAF3IP1-203ENST00000409739 SYTL4Q96C24 671 aaPredicted RBP41.97■■■■■ 4.31
TRAF3IP1-203ENST00000409739 CFAP53Q96M91 514 aa41.97■■■■■ 4.31
TRAF3IP1-203ENST00000409739 LY75O60449 1722 aa41.96■■■■■ 4.31
TRAF3IP1-203ENST00000409739 VIRMAQ69YN4 1812 aaKnown RBP41.95■■■■■ 4.31
TRAF3IP1-203ENST00000409739 HMOX1P09601 288 aa41.95■■■■■ 4.31
TRAF3IP1-203ENST00000409739 NKX1-1Q15270 411 aaPredicted RBP41.95■■■■■ 4.31
TRAF3IP1-203ENST00000409739 PHKG2P15735 406 aa41.94■■■■■ 4.3
TRAF3IP1-203ENST00000409739 PLEKHO1Q53GL0 409 aaPredicted RBP41.93■■■■■ 4.3
TRAF3IP1-203ENST00000409739 IFNL2Q8IZJ0 200 aa41.93■■■■■ 4.3
TRAF3IP1-203ENST00000409739 AMOTQ4VCS5 1084 aa41.91■■■■■ 4.3
TRAF3IP1-203ENST00000409739 PROM2Q8N271 834 aa41.9■■■■■ 4.3
TRAF3IP1-203ENST00000409739 U2SURPO15042 1029 aaKnown RBP41.89■■■■■ 4.3
TRAF3IP1-203ENST00000409739 TXNRD1Q16881 649 aa41.88■■■■■ 4.29
TRAF3IP1-203ENST00000409739 ZNF530Q6P9A1 599 aaPredicted RBP41.88■■■■■ 4.29
TRAF3IP1-203ENST00000409739 SCN11AQ9UI33 1791 aa41.87■■■■■ 4.29
TRAF3IP1-203ENST00000409739 RALBP1Q15311 655 aa41.86■■■■■ 4.29
TRAF3IP1-203ENST00000409739 PAPPAQ13219 1627 aa41.85■■■■■ 4.29
TRAF3IP1-203ENST00000409739 ZNF316A6NFI3 1004 aaPredicted RBP41.84■■■■■ 4.29
TRAF3IP1-203ENST00000409739 KDM6AO15550 1401 aaPredicted RBP41.82■■■■■ 4.29
TRAF3IP1-203ENST00000409739 PSDA5PKW4 1024 aaPredicted RBP41.81■■■■■ 4.28
TRAF3IP1-203ENST00000409739 MPRIPQ6WCQ1 1025 aa41.8■■■■■ 4.28
TRAF3IP1-203ENST00000409739 NUDCQ9Y266 331 aa41.79■■■■■ 4.28
TRAF3IP1-203ENST00000409739 HSP90AB1P08238 724 aaKnown RBP41.78■■■■■ 4.28
TRAF3IP1-203ENST00000409739 R3HDM1Q15032 1099 aaKnown RBP41.78■■■■■ 4.28
TRAF3IP1-203ENST00000409739 C1orf141Q5JVX7 400 aa41.78■■■■■ 4.28
TRAF3IP1-203ENST00000409739 NBPF14Q5TI25 921 aa41.77■■■■■ 4.28
TRAF3IP1-203ENST00000409739 DCAF5Q96JK2 942 aa41.76■■■■■ 4.28
TRAF3IP1-203ENST00000409739 ANO8Q9HCE9 1232 aaPredicted RBP41.76■■■■■ 4.28
TRAF3IP1-203ENST00000409739 ADAMTS7Q9UKP4 1686 aa41.74■■■■■ 4.27
TRAF3IP1-203ENST00000409739 TAF1LQ8IZX4 1826 aa41.74■■■■■ 4.27
TRAF3IP1-203ENST00000409739 PIGBQ92521 554 aa41.73■■■■■ 4.27
TRAF3IP1-203ENST00000409739 RSPH6AQ9H0K4 717 aa41.73■■■■■ 4.27
TRAF3IP1-203ENST00000409739 MYBBP1AQ9BQG0 1328 aaKnown RBP41.72■■■■■ 4.27
TRAF3IP1-203ENST00000409739 LRRC4BQ9NT99 713 aa41.72■■■■■ 4.27
TRAF3IP1-203ENST00000409739 TMOD3Q9NYL9 352 aa41.72■■■■■ 4.27
TRAF3IP1-203ENST00000409739 U2AF1L5P0DN76 240 aaPredicted RBP41.71■■■■■ 4.27
TRAF3IP1-203ENST00000409739 U2AF1Q01081 240 aaKnown RBP eCLIP41.71■■■■■ 4.27
TRAF3IP1-203ENST00000409739 MTHFSDQ2M296 383 aaKnown RBP41.71■■■■■ 4.27
TRAF3IP1-203ENST00000409739 C5P01031 1676 aa41.71■■■■■ 4.27
TRAF3IP1-203ENST00000409739 AKAP4Q5JQC9 854 aa41.7■■■■■ 4.27
TRAF3IP1-203ENST00000409739 PALLDQ8WX93 1383 aa41.69■■■■■ 4.26
TRAF3IP1-203ENST00000409739 SLC27A3Q5K4L6 730 aa41.69■■■■■ 4.26
TRAF3IP1-203ENST00000409739 TUBGCP6Q96RT7 1819 aa41.68■■■■■ 4.26
TRAF3IP1-203ENST00000409739 ERVV-2B6SEH9 535 aa41.68■■■■■ 4.26
TRAF3IP1-203ENST00000409739 PRKAR2BP31323 418 aa41.67■■■■■ 4.26
TRAF3IP1-203ENST00000409739 PRKRIP1Q9H875 184 aaPredicted RBP41.67■■■■■ 4.26
TRAF3IP1-203ENST00000409739 CASZ1Q86V15 1759 aa41.67■■■■■ 4.26
TRAF3IP1-203ENST00000409739 QSER1Q2KHR3 1735 aa41.65■■■■■ 4.26
TRAF3IP1-203ENST00000409739 KCNQ4P56696 695 aa41.63■■■■■ 4.25
TRAF3IP1-203ENST00000409739 SMARCC1Q92922 1105 aaPredicted RBP41.63■■■■■ 4.25
TRAF3IP1-203ENST00000409739 CCNL1Q9UK58 526 aaPredicted RBP41.63■■■■■ 4.25
TRAF3IP1-203ENST00000409739 MRC1P22897 1456 aa41.63■■■■■ 4.25
TRAF3IP1-203ENST00000409739 LRP5O75197 1615 aa41.62■■■■■ 4.25
TRAF3IP1-203ENST00000409739 FCHSD2O94868 740 aa41.61■■■■■ 4.25
TRAF3IP1-203ENST00000409739 STK32BQ9NY57 414 aa41.61■■■■■ 4.25
TRAF3IP1-203ENST00000409739 SRCAPQ6ZRS2 3230 aa41.6■■■■■ 4.25
TRAF3IP1-203ENST00000409739 GAS2L2Q8NHY3 880 aa41.6■■■■■ 4.25
TRAF3IP1-203ENST00000409739 PHACTR3Q96KR7 559 aa41.6■■■■■ 4.25
TRAF3IP1-203ENST00000409739 CABP4P57796 275 aa41.59■■■■■ 4.25
TRAF3IP1-203ENST00000409739 SLC15A2Q16348 729 aa41.59■■■■■ 4.25
TRAF3IP1-203ENST00000409739 ASAP1Q9ULH1 1129 aa41.59■■■■■ 4.25
TRAF3IP1-203ENST00000409739 DLG5Q8TDM6 1919 aa41.59■■■■■ 4.25
TRAF3IP1-203ENST00000409739 MAP3K5Q99683 1374 aa41.58■■■■■ 4.25
TRAF3IP1-203ENST00000409739 SIPA1L3O60292 1781 aaPredicted RBP41.57■■■■■ 4.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms