RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 C16orf71Q8IYS4 520 aaPredicted RBP19.79■□□□□ 0.76
PTPRN2-205ENST00000409483 POLR3AO14802 1390 aaPredicted RBP19.79■□□□□ 0.76
PTPRN2-205ENST00000409483 A0A1W2PP64 1363 aa19.78■□□□□ 0.76
PTPRN2-205ENST00000409483 CLSTN1O94985 981 aa19.78■□□□□ 0.76
PTPRN2-205ENST00000409483 CYP46A1Q9Y6A2 500 aa19.78■□□□□ 0.76
PTPRN2-205ENST00000409483 G3V3G9 751 aa19.78■□□□□ 0.76
PTPRN2-205ENST00000409483 ATP2B1P20020 1258 aa19.78■□□□□ 0.76
PTPRN2-205ENST00000409483 MCM2P49736 904 aa19.78■□□□□ 0.76
PTPRN2-205ENST00000409483 DCAF8Q5TAQ9 597 aa19.78■□□□□ 0.76
PTPRN2-205ENST00000409483 TRIM29Q14134 588 aa19.77■□□□□ 0.76
PTPRN2-205ENST00000409483 SASS6Q6UVJ0 657 aa19.77■□□□□ 0.76
PTPRN2-205ENST00000409483 ERC1Q8IUD2 1116 aa19.77■□□□□ 0.76
PTPRN2-205ENST00000409483 MTMR7Q9Y216 660 aa19.77■□□□□ 0.76
PTPRN2-205ENST00000409483 R3HCC1Q9Y3T6 440 aaKnown RBP19.77■□□□□ 0.76
PTPRN2-205ENST00000409483 FERMT3Q86UX7 667 aa19.77■□□□□ 0.75
PTPRN2-205ENST00000409483 JARID2Q92833 1246 aaPredicted RBP19.77■□□□□ 0.75
PTPRN2-205ENST00000409483 CCDC34Q96HJ3 373 aa19.77■□□□□ 0.75
PTPRN2-205ENST00000409483 ADGRL2O95490 1459 aa19.76■□□□□ 0.75
PTPRN2-205ENST00000409483 RAD21O60216 631 aa19.76■□□□□ 0.75
PTPRN2-205ENST00000409483 BOLA2Q9H3K6 86 aa19.76■□□□□ 0.75
PTPRN2-205ENST00000409483 FKBP4Q02790 459 aaKnown RBP eCLIP19.76■□□□□ 0.753e-6■■■■□ 19.7
PTPRN2-205ENST00000409483 CCDC8Q9H0W5 538 aaPredicted RBP19.76■□□□□ 0.75
PTPRN2-205ENST00000409483 EIF4A2Q14240 407 aaKnown RBP19.76■□□□□ 0.75
PTPRN2-205ENST00000409483 CCDC73Q6ZRK6 1079 aa19.76■□□□□ 0.75
PTPRN2-205ENST00000409483 MBD3O95983 291 aa19.75■□□□□ 0.75
PTPRN2-205ENST00000409483 ANO8Q9HCE9 1232 aaPredicted RBP19.75■□□□□ 0.75
PTPRN2-205ENST00000409483 TTC21BQ7Z4L5 1316 aa19.75■□□□□ 0.75
PTPRN2-205ENST00000409483 ZNF518AQ6AHZ1 1483 aa19.75■□□□□ 0.75
PTPRN2-205ENST00000409483 ABCC10Q5T3U5 1492 aa19.75■□□□□ 0.75
PTPRN2-205ENST00000409483 TNPO1Q92973 898 aaKnown RBP19.75■□□□□ 0.75
PTPRN2-205ENST00000409483 SPG7Q9UQ90 795 aa19.75■□□□□ 0.75
PTPRN2-205ENST00000409483 SDF4Q9BRK5 362 aa19.74■□□□□ 0.75
PTPRN2-205ENST00000409483 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
PTPRN2-205ENST00000409483 FMNL2Q96PY5 1086 aa19.74■□□□□ 0.75
PTPRN2-205ENST00000409483 CWC22Q9HCG8 908 aaKnown RBP19.74■□□□□ 0.75
PTPRN2-205ENST00000409483 CASTP20810 708 aaKnown RBP19.74■□□□□ 0.75
PTPRN2-205ENST00000409483 BMP2KLQ5H9B9 411 aa19.74■□□□□ 0.75
PTPRN2-205ENST00000409483 PI4KAP2A4QPH2 592 aa19.73■□□□□ 0.75
PTPRN2-205ENST00000409483 PI4KAP1Q8N8J0 262 aa19.73■□□□□ 0.75
PTPRN2-205ENST00000409483 RRP12Q5JTH9 1297 aaKnown RBP19.73■□□□□ 0.75
PTPRN2-205ENST00000409483 KIF1BPQ96EK5 621 aa19.73■□□□□ 0.75
PTPRN2-205ENST00000409483 PIK3C2GO75747 1445 aa19.73■□□□□ 0.75
PTPRN2-205ENST00000409483 NUCB1Q02818 461 aa19.73■□□□□ 0.75
PTPRN2-205ENST00000409483 PPIP5K1Q6PFW1 1433 aa19.73■□□□□ 0.75
PTPRN2-205ENST00000409483 LARP1BQ659C4 914 aaKnown RBP19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 PRPF40BQ6NWY9 871 aaKnown RBP19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 DNAAF4Q8WXU2 420 aa19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 IL16Q14005 1332 aa19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 CFAP65Q6ZU64 1925 aaKnown RBP19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 VAMP4O75379 141 aa19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 HDAC1Q13547 482 aaPredicted RBP19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 GDPD2Q9HCC8 539 aa19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 CNNM1Q9NRU3 951 aa19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 SPC24Q8NBT2 197 aa19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 CEP170Q5SW79 1584 aa19.72■□□□□ 0.75
PTPRN2-205ENST00000409483 TPD52L1Q16890 204 aaPredicted RBP19.71■□□□□ 0.75
PTPRN2-205ENST00000409483 CCAR2Q8N163 923 aaKnown RBP19.71■□□□□ 0.75
PTPRN2-205ENST00000409483 MRPL50Q8N5N7 158 aaKnown RBP19.71■□□□□ 0.75
PTPRN2-205ENST00000409483 KCNH5Q8NCM2 988 aa19.71■□□□□ 0.75
PTPRN2-205ENST00000409483 CIZ1Q9ULV3 898 aaPredicted RBP19.71■□□□□ 0.75
PTPRN2-205ENST00000409483 BLOC1S2Q6QNY1 142 aa19.71■□□□□ 0.75
PTPRN2-205ENST00000409483 MYD88Q99836 296 aa19.71■□□□□ 0.75
PTPRN2-205ENST00000409483 TMX4Q9H1E5 349 aaPredicted RBP19.71■□□□□ 0.75
PTPRN2-205ENST00000409483 PDRG1Q9NUG6 133 aa19.71■□□□□ 0.75
PTPRN2-205ENST00000409483 TSPY26PQ9H489 355 aa19.71■□□□□ 0.75
PTPRN2-205ENST00000409483 SYCE3A1L190 88 aa19.7■□□□□ 0.74
PTPRN2-205ENST00000409483 DDX11Q96FC9 970 aa19.7■□□□□ 0.74
PTPRN2-205ENST00000409483 POGZQ7Z3K3 1410 aa19.7■□□□□ 0.74
PTPRN2-205ENST00000409483 MARCH6O60337 910 aa19.7■□□□□ 0.74
PTPRN2-205ENST00000409483 CCDC83Q8IWF9 413 aa19.7■□□□□ 0.74
PTPRN2-205ENST00000409483 WDR33Q9C0J8 1336 aaKnown RBP19.7■□□□□ 0.74
PTPRN2-205ENST00000409483 VPS53Q5VIR6 699 aa19.7■□□□□ 0.74
PTPRN2-205ENST00000409483 PPP1R42Q7Z4L9 355 aa19.7■□□□□ 0.74
PTPRN2-205ENST00000409483 CHRNA2Q15822 529 aa19.69■□□□□ 0.74
PTPRN2-205ENST00000409483 KIF6Q6ZMV9 814 aa19.69■□□□□ 0.74
PTPRN2-205ENST00000409483 HIP1O00291 1037 aa19.68■□□□□ 0.74
PTPRN2-205ENST00000409483 SDSP20132 328 aa19.68■□□□□ 0.74
PTPRN2-205ENST00000409483 TTC39AQ5SRH9 613 aa19.68■□□□□ 0.74
PTPRN2-205ENST00000409483 MTHFSDQ2M296 383 aaKnown RBP19.68■□□□□ 0.74
PTPRN2-205ENST00000409483 CHMP4CQ96CF2 233 aa19.68■□□□□ 0.74
PTPRN2-205ENST00000409483 TRIM5Q9C035 493 aa19.68■□□□□ 0.74
PTPRN2-205ENST00000409483 ABCC2Q92887 1545 aa19.68■□□□□ 0.74
PTPRN2-205ENST00000409483 DHX16O60231 1041 aaKnown RBP19.68■□□□□ 0.74
PTPRN2-205ENST00000409483 PDCP20941 246 aa19.68■□□□□ 0.74
PTPRN2-205ENST00000409483 PPFIA3O75145 1194 aa19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 PIP4K2AP48426 406 aaPredicted RBP19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 TNRQ92752 1358 aa19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 ERICH2A1L162 156 aa19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 NUTM2BA6NNL0 878 aaPredicted RBP19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 NUTM2EB1AL46 878 aaPredicted RBP19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 CCDC57Q2TAC2 916 aa19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 NUTM2AQ8IVF1 878 aaPredicted RBP19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 ATP5J2-PTCD1G3V325 749 aa19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 TTC22Q5TAA0 569 aa19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 RIMS2Q9UQ26 1411 aa19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 TARBP1Q13395 1621 aaKnown RBP19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 CCDC158Q5M9N0 1113 aa19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 ZBTB40Q9NUA8 1239 aa19.67■□□□□ 0.74
PTPRN2-205ENST00000409483 PTPRCP08575 1304 aa19.66■□□□□ 0.74
PTPRN2-205ENST00000409483 GLRX3O76003 335 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms