RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 BRPF3Q9ULD4 1205 aa12.21□□□□□ -0.46
KDM3A-202ENST00000409064 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
KDM3A-202ENST00000409064 FOXD4L6Q3SYB3 417 aaPredicted RBP12.2□□□□□ -0.46
KDM3A-202ENST00000409064 FOXD4L3Q6VB84 417 aaPredicted RBP12.2□□□□□ -0.46
KDM3A-202ENST00000409064 ERC1Q8IUD2 1116 aa12.2□□□□□ -0.46
KDM3A-202ENST00000409064 NAP1L5Q96NT1 182 aaPredicted RBP12.2□□□□□ -0.46
KDM3A-202ENST00000409064 HSP90AB3PQ58FF7 597 aa12.2□□□□□ -0.46
KDM3A-202ENST00000409064 WWC1Q8IX03 1113 aa12.2□□□□□ -0.46
KDM3A-202ENST00000409064 SMARCC1Q92922 1105 aaPredicted RBP12.2□□□□□ -0.46
KDM3A-202ENST00000409064 USP21Q9UK80 565 aa12.2□□□□□ -0.46
KDM3A-202ENST00000409064 ADGRL2O95490 1459 aa12.2□□□□□ -0.46
KDM3A-202ENST00000409064 METTL24Q5JXM2 366 aa12.2□□□□□ -0.46
KDM3A-202ENST00000409064 SLC3A2P08195 630 aaKnown RBP12.2□□□□□ -0.46
KDM3A-202ENST00000409064 FAM98CQ17RN3 349 aaKnown RBP12.2□□□□□ -0.46
KDM3A-202ENST00000409064 LRP2BPQ9P2M1 347 aa12.2□□□□□ -0.46
KDM3A-202ENST00000409064 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
KDM3A-202ENST00000409064 WDR63Q8IWG1 891 aa12.19□□□□□ -0.46
KDM3A-202ENST00000409064 DRC7Q8IY82 874 aa12.19□□□□□ -0.46
KDM3A-202ENST00000409064 PBRM1Q86U86 1689 aa12.19□□□□□ -0.46
KDM3A-202ENST00000409064 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
KDM3A-202ENST00000409064 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
KDM3A-202ENST00000409064 NBPF5PQ86XG9 351 aaPredicted RBP12.19□□□□□ -0.46
KDM3A-202ENST00000409064 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
KDM3A-202ENST00000409064 SCAF11Q99590 1463 aaKnown RBP12.19□□□□□ -0.46
KDM3A-202ENST00000409064 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
KDM3A-202ENST00000409064 AAMPQ13685 434 aa12.18□□□□□ -0.46
KDM3A-202ENST00000409064 PDE3AQ14432 1141 aa12.18□□□□□ -0.46
KDM3A-202ENST00000409064 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
KDM3A-202ENST00000409064 DISP3Q9P2K9 1392 aa12.18□□□□□ -0.46
KDM3A-202ENST00000409064 GBP4Q96PP9 640 aa12.18□□□□□ -0.46
KDM3A-202ENST00000409064 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.18□□□□□ -0.461e-6■■■□□ 14.8
KDM3A-202ENST00000409064 DISP1Q96F81 1524 aa12.18□□□□□ -0.46
KDM3A-202ENST00000409064 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
KDM3A-202ENST00000409064 SART3Q15020 963 aaKnown RBP12.18□□□□□ -0.46
KDM3A-202ENST00000409064 GZF1Q9H116 711 aaPredicted RBP12.18□□□□□ -0.46
KDM3A-202ENST00000409064 WDHD1O75717 1129 aaPredicted RBP12.17□□□□□ -0.46
KDM3A-202ENST00000409064 BCAR3O75815 825 aa12.17□□□□□ -0.46
KDM3A-202ENST00000409064 LTKP29376 864 aa12.17□□□□□ -0.46
KDM3A-202ENST00000409064 CNTROBQ8N137 903 aa12.17□□□□□ -0.46
KDM3A-202ENST00000409064 PRAG1Q86YV5 1406 aa12.17□□□□□ -0.46
KDM3A-202ENST00000409064 RSPH6AQ9H0K4 717 aa12.17□□□□□ -0.46
KDM3A-202ENST00000409064 DBF4Q9UBU7 674 aaPredicted RBP12.17□□□□□ -0.46
KDM3A-202ENST00000409064 PPIP5K1Q6PFW1 1433 aa12.17□□□□□ -0.46
KDM3A-202ENST00000409064 IDH1O75874 414 aaKnown RBP12.17□□□□□ -0.46
KDM3A-202ENST00000409064 IFIT5Q13325 482 aaKnown RBP12.17□□□□□ -0.46
KDM3A-202ENST00000409064 ADGBQ8N7X0 1667 aa12.17□□□□□ -0.46
KDM3A-202ENST00000409064 A0A087WZG4 1122 aa12.17□□□□□ -0.46
KDM3A-202ENST00000409064 DDX46Q7L014 1031 aaKnown RBP12.17□□□□□ -0.46
KDM3A-202ENST00000409064 KDM5CP41229 1560 aa12.16□□□□□ -0.46
KDM3A-202ENST00000409064 ATP5J2-PTCD1G3V325 749 aa12.16□□□□□ -0.46
KDM3A-202ENST00000409064 KDM4AO75164 1064 aa12.16□□□□□ -0.46
KDM3A-202ENST00000409064 CAVIN4Q5BKX8 364 aa12.16□□□□□ -0.46
KDM3A-202ENST00000409064 SHANK2Q9UPX8 1470 aa12.16□□□□□ -0.46
KDM3A-202ENST00000409064 IFIT1P09914 478 aaKnown RBP12.16□□□□□ -0.46
KDM3A-202ENST00000409064 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
KDM3A-202ENST00000409064 ANXA1P04083 346 aa12.16□□□□□ -0.46
KDM3A-202ENST00000409064 SNRPA1P09661 255 aaKnown RBP12.16□□□□□ -0.46
KDM3A-202ENST00000409064 GRM1Q13255 1194 aa12.16□□□□□ -0.46
KDM3A-202ENST00000409064 ATF7IPQ6VMQ6 1270 aa12.15□□□□□ -0.46
KDM3A-202ENST00000409064 SETDB2Q96T68 719 aa12.15□□□□□ -0.46
KDM3A-202ENST00000409064 NINLQ9Y2I6 1382 aa12.15□□□□□ -0.46
KDM3A-202ENST00000409064 PES1O00541 588 aaKnown RBP12.15□□□□□ -0.46
KDM3A-202ENST00000409064 STK32BQ9NY57 414 aa12.15□□□□□ -0.46
KDM3A-202ENST00000409064 FOSBP53539 338 aa12.15□□□□□ -0.46
KDM3A-202ENST00000409064 INTS3Q68E01 1043 aaKnown RBP12.15□□□□□ -0.46
KDM3A-202ENST00000409064 AACSQ86V21 672 aa12.15□□□□□ -0.46
KDM3A-202ENST00000409064 IL1RAPL2Q9NP60 686 aa12.15□□□□□ -0.46
KDM3A-202ENST00000409064 RTCBQ9Y3I0 505 aaKnown RBP12.15□□□□□ -0.46
KDM3A-202ENST00000409064 YEATS2Q9ULM3 1422 aa12.15□□□□□ -0.46
KDM3A-202ENST00000409064 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.47
KDM3A-202ENST00000409064 LRRIQ1Q96JM4 1722 aa12.14□□□□□ -0.47
KDM3A-202ENST00000409064 FAM83GA6ND36 823 aa12.14□□□□□ -0.47
KDM3A-202ENST00000409064 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
KDM3A-202ENST00000409064 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
KDM3A-202ENST00000409064 ST5P78524 1137 aa12.14□□□□□ -0.47
KDM3A-202ENST00000409064 SAFBQ15424 915 aaKnown RBP eCLIP12.14□□□□□ -0.47
KDM3A-202ENST00000409064 PPP1R42Q7Z4L9 355 aa12.14□□□□□ -0.47
KDM3A-202ENST00000409064 BAG6P46379 1132 aa12.14□□□□□ -0.47
KDM3A-202ENST00000409064 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
KDM3A-202ENST00000409064 NEO1Q92859 1461 aa12.13□□□□□ -0.47
KDM3A-202ENST00000409064 F6X3S4 739 aa12.13□□□□□ -0.47
KDM3A-202ENST00000409064 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
KDM3A-202ENST00000409064 TARBP1Q13395 1621 aaKnown RBP12.13□□□□□ -0.47
KDM3A-202ENST00000409064 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
KDM3A-202ENST00000409064 NFATC2IPQ8NCF5 419 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 NKTRP30414 1462 aaKnown RBP12.12□□□□□ -0.47
KDM3A-202ENST00000409064 APBA3O96018 575 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 PDE4CQ08493 712 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 KIAA2012Q0VF49 1180 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 CSPP1Q1MSJ5 1256 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 LRRCC1Q9C099 1032 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 AEBP1Q8IUX7 1158 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 PTMSP20962 102 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 CRACR2BQ8N4Y2 399 aaPredicted RBP12.12□□□□□ -0.47
KDM3A-202ENST00000409064 TESK2Q96S53 571 aa12.12□□□□□ -0.47
KDM3A-202ENST00000409064 CDC5LQ99459 802 aaKnown RBP12.12□□□□□ -0.47
KDM3A-202ENST00000409064 INSRP06213 1382 aa12.11□□□□□ -0.47
KDM3A-202ENST00000409064 TMEM2Q9UHN6 1383 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms