RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 NUP62CLQ9H1M0 184 aa18.72■□□□□ 0.59
SSFA2-202ENST00000409001 XBP1P17861 261 aa18.72■□□□□ 0.59
SSFA2-202ENST00000409001 CCDC83Q8IWF9 413 aa18.72■□□□□ 0.59
SSFA2-202ENST00000409001 PARD3Q8TEW0 1356 aa18.72■□□□□ 0.59
SSFA2-202ENST00000409001 C8orf34Q49A92 452 aa18.72■□□□□ 0.59
SSFA2-202ENST00000409001 PROSER2Q86WR7 435 aaPredicted RBP18.72■□□□□ 0.59
SSFA2-202ENST00000409001 NOS1P29475 1434 aa18.71■□□□□ 0.59
SSFA2-202ENST00000409001 RBM42Q9BTD8 480 aaKnown RBP18.71■□□□□ 0.59
SSFA2-202ENST00000409001 C14orf93Q9H972 538 aaKnown RBP18.71■□□□□ 0.59
SSFA2-202ENST00000409001 DDX11Q96FC9 970 aa18.71■□□□□ 0.59
SSFA2-202ENST00000409001 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
SSFA2-202ENST00000409001 FAM83GA6ND36 823 aa18.7■□□□□ 0.58
SSFA2-202ENST00000409001 FKBP4Q02790 459 aaKnown RBP eCLIP18.7■□□□□ 0.58
SSFA2-202ENST00000409001 TTC39AQ5SRH9 613 aa18.7■□□□□ 0.58
SSFA2-202ENST00000409001 FILIP1Q7Z7B0 1213 aa18.7■□□□□ 0.58
SSFA2-202ENST00000409001 STK11IPQ8N1F8 1099 aa18.7■□□□□ 0.58
SSFA2-202ENST00000409001 GLRX3O76003 335 aaKnown RBP18.7■□□□□ 0.58
SSFA2-202ENST00000409001 PRPF40BQ6NWY9 871 aaKnown RBP18.7■□□□□ 0.58
SSFA2-202ENST00000409001 BRMS1Q9HCU9 246 aa18.7■□□□□ 0.58
SSFA2-202ENST00000409001 RALGAPBQ86X10 1494 aa18.7■□□□□ 0.58
SSFA2-202ENST00000409001 FBXO31Q5XUX0 539 aaPredicted RBP18.7■□□□□ 0.58
SSFA2-202ENST00000409001 XPCQ01831 940 aaPredicted RBP18.69■□□□□ 0.58
SSFA2-202ENST00000409001 CNNM1Q9NRU3 951 aa18.69■□□□□ 0.58
SSFA2-202ENST00000409001 TNNQ9UQP3 1299 aa18.69■□□□□ 0.58
SSFA2-202ENST00000409001 CABP4P57796 275 aa18.69■□□□□ 0.58
SSFA2-202ENST00000409001 CCDC112Q8NEF3 446 aa18.69■□□□□ 0.58
SSFA2-202ENST00000409001 BRPF1P55201 1214 aaPredicted RBP18.69■□□□□ 0.58
SSFA2-202ENST00000409001 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
SSFA2-202ENST00000409001 UGGT2Q9NYU1 1516 aa18.68■□□□□ 0.58
SSFA2-202ENST00000409001 TESK2Q96S53 571 aa18.68■□□□□ 0.58
SSFA2-202ENST00000409001 GDPD2Q9HCC8 539 aa18.68■□□□□ 0.58
SSFA2-202ENST00000409001 MBIPQ9NS73 344 aa18.68■□□□□ 0.58
SSFA2-202ENST00000409001 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
SSFA2-202ENST00000409001 SERPINC1P01008 464 aa18.68■□□□□ 0.58
SSFA2-202ENST00000409001 CAMK4Q16566 473 aa18.68■□□□□ 0.58
SSFA2-202ENST00000409001 HSP90B2PQ58FF3 399 aa18.68■□□□□ 0.58
SSFA2-202ENST00000409001 NAP1L1P55209 391 aaKnown RBP18.68■□□□□ 0.58
SSFA2-202ENST00000409001 JMYQ8N9B5 988 aa18.68■□□□□ 0.58
SSFA2-202ENST00000409001 LARP6Q9BRS8 491 aaKnown RBP18.68■□□□□ 0.58
SSFA2-202ENST00000409001 TAF7Q15545 349 aaPredicted RBP18.68■□□□□ 0.58
SSFA2-202ENST00000409001 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
SSFA2-202ENST00000409001 CFAP45Q9UL16 551 aa18.67■□□□□ 0.58
SSFA2-202ENST00000409001 STRN4Q9NRL3 753 aa18.67■□□□□ 0.58
SSFA2-202ENST00000409001 TSHZ3Q63HK5 1081 aa18.67■□□□□ 0.58
SSFA2-202ENST00000409001 BOLA2Q9H3K6 86 aa18.67■□□□□ 0.58
SSFA2-202ENST00000409001 BAG4O95429 457 aaKnown RBP18.66■□□□□ 0.58
SSFA2-202ENST00000409001 HDAC1Q13547 482 aaPredicted RBP18.66■□□□□ 0.58
SSFA2-202ENST00000409001 USHBP1Q8N6Y0 703 aa18.66■□□□□ 0.58
SSFA2-202ENST00000409001 MAP3K11Q16584 847 aa18.66■□□□□ 0.58
SSFA2-202ENST00000409001 KIF6Q6ZMV9 814 aa18.66■□□□□ 0.58
SSFA2-202ENST00000409001 ADGRL1O94910 1474 aa18.66■□□□□ 0.58
SSFA2-202ENST00000409001 KRT32Q14532 448 aa18.66■□□□□ 0.58
SSFA2-202ENST00000409001 WASLO00401 505 aaPredicted RBP18.65■□□□□ 0.58
SSFA2-202ENST00000409001 PLEKHH1Q9ULM0 1364 aa18.65■□□□□ 0.58
SSFA2-202ENST00000409001 RRP9O43818 475 aaKnown RBP18.65■□□□□ 0.58
SSFA2-202ENST00000409001 CEP126Q9P2H0 1117 aa18.65■□□□□ 0.58
SSFA2-202ENST00000409001 RLBP1P12271 317 aa18.65■□□□□ 0.58
SSFA2-202ENST00000409001 RAB11FIP3O75154 756 aa18.65■□□□□ 0.58
SSFA2-202ENST00000409001 CCDC57Q2TAC2 916 aa18.65■□□□□ 0.58
SSFA2-202ENST00000409001 ZC3H6P61129 1189 aaKnown RBP18.64■□□□□ 0.58
SSFA2-202ENST00000409001 FLIIQ13045 1269 aa18.64■□□□□ 0.57
SSFA2-202ENST00000409001 RBM33Q96EV2 1170 aaKnown RBP18.64■□□□□ 0.57
SSFA2-202ENST00000409001 CCDC85AQ96PX6 553 aaPredicted RBP18.64■□□□□ 0.57
SSFA2-202ENST00000409001 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.64■□□□□ 0.574e-6■■□□□ 12.6
SSFA2-202ENST00000409001 NUCB1Q02818 461 aa18.64■□□□□ 0.57
SSFA2-202ENST00000409001 FAM135AQ9P2D6 1515 aa18.64■□□□□ 0.57
SSFA2-202ENST00000409001 PRAG1Q86YV5 1406 aa18.64■□□□□ 0.57
SSFA2-202ENST00000409001 CEP57L1Q8IYX8 460 aa18.64■□□□□ 0.57
SSFA2-202ENST00000409001 SPG7Q9UQ90 795 aa18.63■□□□□ 0.57
SSFA2-202ENST00000409001 PER1O15534 1290 aaPredicted RBP18.63■□□□□ 0.57
SSFA2-202ENST00000409001 FAM177A1Q8N128 213 aaPredicted RBP18.63■□□□□ 0.57
SSFA2-202ENST00000409001 TRIM34Q9BYJ4 488 aa18.63■□□□□ 0.57
SSFA2-202ENST00000409001 NSD2O96028 1365 aa18.63■□□□□ 0.57
SSFA2-202ENST00000409001 FILIP1LQ4L180 1135 aa18.63■□□□□ 0.57
SSFA2-202ENST00000409001 IL16Q14005 1332 aa18.63■□□□□ 0.57
SSFA2-202ENST00000409001 DHX29Q7Z478 1369 aaKnown RBP18.63■□□□□ 0.57
SSFA2-202ENST00000409001 CD109Q6YHK3 1445 aa18.62■□□□□ 0.57
SSFA2-202ENST00000409001 CCDC8Q9H0W5 538 aaPredicted RBP18.62■□□□□ 0.57
SSFA2-202ENST00000409001 USP25Q9UHP3 1055 aa18.62■□□□□ 0.57
SSFA2-202ENST00000409001 ACBD3Q9H3P7 528 aa18.62■□□□□ 0.57
SSFA2-202ENST00000409001 TTC22Q5TAA0 569 aa18.62■□□□□ 0.57
SSFA2-202ENST00000409001 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
SSFA2-202ENST00000409001 TRIM22Q8IYM9 498 aa18.62■□□□□ 0.57
SSFA2-202ENST00000409001 CCDC183Q5T5S1 534 aa18.61■□□□□ 0.57
SSFA2-202ENST00000409001 RUFY1Q96T51 708 aa18.61■□□□□ 0.57
SSFA2-202ENST00000409001 LIMCH1Q9UPQ0 1083 aa18.61■□□□□ 0.57
SSFA2-202ENST00000409001 PTPRCP08575 1304 aa18.61■□□□□ 0.57
SSFA2-202ENST00000409001 SEC24BO95487 1268 aa18.61■□□□□ 0.57
SSFA2-202ENST00000409001 CCP110O43303 1012 aa18.6■□□□□ 0.57
SSFA2-202ENST00000409001 DNAAF4Q8WXU2 420 aa18.6■□□□□ 0.57
SSFA2-202ENST00000409001 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
SSFA2-202ENST00000409001 RBM27Q9P2N5 1060 aaKnown RBP18.6■□□□□ 0.57
SSFA2-202ENST00000409001 OFD1O75665 1012 aa18.6■□□□□ 0.57
SSFA2-202ENST00000409001 XRCC6P12956 609 aaKnown RBP eCLIP18.6■□□□□ 0.57
SSFA2-202ENST00000409001 KLHL40Q2TBA0 621 aa18.6■□□□□ 0.57
SSFA2-202ENST00000409001 CAGE1Q8TC20 777 aa18.6■□□□□ 0.57
SSFA2-202ENST00000409001 NUP133Q8WUM0 1156 aa18.6■□□□□ 0.57
SSFA2-202ENST00000409001 PANK2Q9BZ23 570 aa18.6■□□□□ 0.57
SSFA2-202ENST00000409001 ASXL1Q8IXJ9 1541 aa18.59■□□□□ 0.57
SSFA2-202ENST00000409001 SETQ01105 290 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms