RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 FBLN1P23142 703 aa12.45□□□□□ -0.42
SNORD88A-201ENST00000408314 ACSBG1Q96GR2 724 aa12.45□□□□□ -0.42
SNORD88A-201ENST00000408314 SPON1Q9HCB6 807 aa12.45□□□□□ -0.42
SNORD88A-201ENST00000408314 BTAF1O14981 1849 aa12.45□□□□□ -0.42
SNORD88A-201ENST00000408314 RGPD2P0DJD1 1756 aa12.44□□□□□ -0.42
SNORD88A-201ENST00000408314 KCNQ2O43526 872 aa12.44□□□□□ -0.42
SNORD88A-201ENST00000408314 PANK3Q9H999 370 aa12.44□□□□□ -0.42
SNORD88A-201ENST00000408314 KNSTRNQ9Y448 316 aa12.44□□□□□ -0.42
SNORD88A-201ENST00000408314 EMILIN1Q9Y6C2 1016 aa12.44□□□□□ -0.42
SNORD88A-201ENST00000408314 KAT6BQ8WYB5 2073 aa12.44□□□□□ -0.42
SNORD88A-201ENST00000408314 SLC27A3Q5K4L6 730 aa12.43□□□□□ -0.42
SNORD88A-201ENST00000408314 PTF1AQ7RTS3 328 aa12.43□□□□□ -0.42
SNORD88A-201ENST00000408314 PPP1R1BQ9UD71 204 aaPredicted RBP12.43□□□□□ -0.42
SNORD88A-201ENST00000408314 NCAPD2Q15021 1401 aa12.43□□□□□ -0.42
SNORD88A-201ENST00000408314 DOT1LQ8TEK3 1739 aa12.42□□□□□ -0.42
SNORD88A-201ENST00000408314 MAP2P11137 1827 aaKnown RBP12.42□□□□□ -0.42
SNORD88A-201ENST00000408314 SLC15A2Q16348 729 aa12.42□□□□□ -0.42
SNORD88A-201ENST00000408314 USHBP1Q8N6Y0 703 aa12.42□□□□□ -0.42
SNORD88A-201ENST00000408314 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
SNORD88A-201ENST00000408314 SPG7Q9UQ90 795 aa12.42□□□□□ -0.42
SNORD88A-201ENST00000408314 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
SNORD88A-201ENST00000408314 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
SNORD88A-201ENST00000408314 ANO8Q9HCE9 1232 aaPredicted RBP12.41□□□□□ -0.42
SNORD88A-201ENST00000408314 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNORD88A-201ENST00000408314 POLKQ9UBT6 870 aa12.41□□□□□ -0.42
SNORD88A-201ENST00000408314 PKD1L3Q7Z443 1732 aa12.4□□□□□ -0.42
SNORD88A-201ENST00000408314 PROM2Q8N271 834 aa12.4□□□□□ -0.42
SNORD88A-201ENST00000408314 CASZ1Q86V15 1759 aa12.4□□□□□ -0.42
SNORD88A-201ENST00000408314 PAPPAQ13219 1627 aa12.4□□□□□ -0.42
SNORD88A-201ENST00000408314 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
SNORD88A-201ENST00000408314 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
SNORD88A-201ENST00000408314 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
SNORD88A-201ENST00000408314 KIF7Q2M1P5 1343 aa12.38□□□□□ -0.43
SNORD88A-201ENST00000408314 SMARCC1Q92922 1105 aaPredicted RBP12.37□□□□□ -0.43
SNORD88A-201ENST00000408314 EYA1Q99502 592 aa12.37□□□□□ -0.43
SNORD88A-201ENST00000408314 MTFR1LQ9H019 292 aa12.37□□□□□ -0.43
SNORD88A-201ENST00000408314 EIF4A2Q14240 407 aaKnown RBP12.36□□□□□ -0.43
SNORD88A-201ENST00000408314 CCNL1Q9UK58 526 aaPredicted RBP12.36□□□□□ -0.43
SNORD88A-201ENST00000408314 LY75O60449 1722 aa12.36□□□□□ -0.43
SNORD88A-201ENST00000408314 QSER1Q2KHR3 1735 aa12.36□□□□□ -0.43
SNORD88A-201ENST00000408314 IGSF1Q8N6C5 1336 aa12.36□□□□□ -0.43
SNORD88A-201ENST00000408314 CYP27B1O15528 508 aa12.35□□□□□ -0.43
SNORD88A-201ENST00000408314 HSP90AB1P08238 724 aaKnown RBP12.35□□□□□ -0.43
SNORD88A-201ENST00000408314 IFNL2Q8IZJ0 200 aa12.35□□□□□ -0.43
SNORD88A-201ENST00000408314 SLC16A10Q8TF71 515 aa12.35□□□□□ -0.43
SNORD88A-201ENST00000408314 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
SNORD88A-201ENST00000408314 NKX1-1Q15270 411 aaPredicted RBP12.34□□□□□ -0.43
SNORD88A-201ENST00000408314 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
SNORD88A-201ENST00000408314 TFCP2L1Q9NZI6 479 aa12.34□□□□□ -0.43
SNORD88A-201ENST00000408314 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
SNORD88A-201ENST00000408314 NPC1L1Q9UHC9 1359 aa12.33□□□□□ -0.44
SNORD88A-201ENST00000408314 PLEKHO1Q53GL0 409 aaPredicted RBP12.33□□□□□ -0.44
SNORD88A-201ENST00000408314 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.44
SNORD88A-201ENST00000408314 MPRIPQ6WCQ1 1025 aa12.33□□□□□ -0.44
SNORD88A-201ENST00000408314 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
SNORD88A-201ENST00000408314 TMOD3Q9NYL9 352 aa12.33□□□□□ -0.44
SNORD88A-201ENST00000408314 PHKG2P15735 406 aa12.32□□□□□ -0.44
SNORD88A-201ENST00000408314 POLD1P28340 1107 aa12.32□□□□□ -0.44
SNORD88A-201ENST00000408314 ZNF827Q17R98 1081 aa12.32□□□□□ -0.44
SNORD88A-201ENST00000408314 FLAD1Q8NFF5 587 aa12.32□□□□□ -0.44
SNORD88A-201ENST00000408314 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
SNORD88A-201ENST00000408314 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
SNORD88A-201ENST00000408314 ITGB4P16144 1822 aa12.3□□□□□ -0.44
SNORD88A-201ENST00000408314 C5P01031 1676 aa12.3□□□□□ -0.44
SNORD88A-201ENST00000408314 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
SNORD88A-201ENST00000408314 DCAF5Q96JK2 942 aa12.3□□□□□ -0.44
SNORD88A-201ENST00000408314 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
SNORD88A-201ENST00000408314 KDRP35968 1356 aa12.3□□□□□ -0.44
SNORD88A-201ENST00000408314 ERVV-2B6SEH9 535 aa12.29□□□□□ -0.44
SNORD88A-201ENST00000408314 PTGER2P43116 358 aa12.29□□□□□ -0.44
SNORD88A-201ENST00000408314 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
SNORD88A-201ENST00000408314 PNPLA7Q6ZV29 1317 aa12.29□□□□□ -0.44
SNORD88A-201ENST00000408314 MAP3K5Q99683 1374 aa12.29□□□□□ -0.44
SNORD88A-201ENST00000408314 PER1O15534 1290 aaPredicted RBP12.28□□□□□ -0.44
SNORD88A-201ENST00000408314 PIGBQ92521 554 aa12.28□□□□□ -0.44
SNORD88A-201ENST00000408314 AK7Q96M32 723 aa12.28□□□□□ -0.44
SNORD88A-201ENST00000408314 ARXQ96QS3 562 aa12.28□□□□□ -0.44
SNORD88A-201ENST00000408314 PDGFDQ9GZP0 370 aaPredicted RBP12.28□□□□□ -0.44
SNORD88A-201ENST00000408314 IL13P35225 146 aa12.27□□□□□ -0.45
SNORD88A-201ENST00000408314 MTHFSP49914 203 aa12.27□□□□□ -0.45
SNORD88A-201ENST00000408314 CC2D1BQ5T0F9 858 aaKnown RBP12.27□□□□□ -0.45
SNORD88A-201ENST00000408314 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.45
SNORD88A-201ENST00000408314 TAF1LQ8IZX4 1826 aa12.26□□□□□ -0.45
SNORD88A-201ENST00000408314 LOC102724428A0A0B4J2F2 783 aa12.26□□□□□ -0.45
SNORD88A-201ENST00000408314 MSH5O43196 834 aa12.26□□□□□ -0.45
SNORD88A-201ENST00000408314 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
SNORD88A-201ENST00000408314 SIK1P57059 783 aa12.26□□□□□ -0.45
SNORD88A-201ENST00000408314 SGIP1Q9BQI5 828 aa12.26□□□□□ -0.45
SNORD88A-201ENST00000408314 C4BP0C0L5 1744 aa12.25□□□□□ -0.45
SNORD88A-201ENST00000408314 TUBGCP6Q96RT7 1819 aa12.25□□□□□ -0.45
SNORD88A-201ENST00000408314 KCNQ4P56696 695 aa12.25□□□□□ -0.45
SNORD88A-201ENST00000408314 CABP4P57796 275 aa12.25□□□□□ -0.45
SNORD88A-201ENST00000408314 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
SNORD88A-201ENST00000408314 FHDC1Q9C0D6 1143 aaPredicted RBP12.25□□□□□ -0.45
SNORD88A-201ENST00000408314 COL24A1Q17RW2 1714 aa12.25□□□□□ -0.45
SNORD88A-201ENST00000408314 ZNF831Q5JPB2 1677 aa12.24□□□□□ -0.45
SNORD88A-201ENST00000408314 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
SNORD88A-201ENST00000408314 SYT17Q9BSW7 474 aa12.24□□□□□ -0.45
SNORD88A-201ENST00000408314 SSFA2P28290 1259 aa12.23□□□□□ -0.45
SNORD88A-201ENST00000408314 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 290.3 ms