RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 SPATA31E1Q6ZUB1 1445 aa12.35□□□□□ -0.43
GPN1-202ENST00000407583 PIK3C2AO00443 1686 aa12.35□□□□□ -0.43
GPN1-202ENST00000407583 PXDNLA1KZ92 1463 aa12.35□□□□□ -0.43
GPN1-202ENST00000407583 CTCFP49711 727 aaPredicted RBP12.35□□□□□ -0.43
GPN1-202ENST00000407583 POLR3AO14802 1390 aaPredicted RBP12.35□□□□□ -0.43
GPN1-202ENST00000407583 PLEKHG2Q9H7P9 1386 aa12.35□□□□□ -0.43
GPN1-202ENST00000407583 ITSN1Q15811 1721 aa12.34□□□□□ -0.43
GPN1-202ENST00000407583 COL18A1P39060 1754 aa12.34□□□□□ -0.43
GPN1-202ENST00000407583 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
GPN1-202ENST00000407583 MKRN1Q9UHC7 482 aaKnown RBP12.34□□□□□ -0.43
GPN1-202ENST00000407583 ACEP12821 1306 aa12.34□□□□□ -0.43
GPN1-202ENST00000407583 RAB3GAP2Q9H2M9 1393 aa12.34□□□□□ -0.43
GPN1-202ENST00000407583 PPIP5K1Q6PFW1 1433 aa12.34□□□□□ -0.43
GPN1-202ENST00000407583 LBX1P52954 281 aa12.33□□□□□ -0.44
GPN1-202ENST00000407583 C9orf131Q5VYM1 1079 aa12.33□□□□□ -0.44
GPN1-202ENST00000407583 NUDT16Q96DE0 195 aaKnown RBP12.33□□□□□ -0.44
GPN1-202ENST00000407583 KDM2BQ8NHM5 1336 aa12.33□□□□□ -0.44
GPN1-202ENST00000407583 ARHGAP27Q6ZUM4 889 aa12.32□□□□□ -0.44
GPN1-202ENST00000407583 CSB-PGBD3P0DP91 1061 aa12.31□□□□□ -0.44
GPN1-202ENST00000407583 TNRC6CQ9HCJ0 1690 aaKnown RBP12.31□□□□□ -0.44
GPN1-202ENST00000407583 CCER2I3L3R5 266 aa12.3□□□□□ -0.44
GPN1-202ENST00000407583 AIDAQ96BJ3 306 aa12.3□□□□□ -0.44
GPN1-202ENST00000407583 TRAK1Q9UPV9 953 aa12.3□□□□□ -0.44
GPN1-202ENST00000407583 BCS1LQ9Y276 419 aa12.3□□□□□ -0.44
GPN1-202ENST00000407583 SLIT3O75094 1523 aa12.3□□□□□ -0.44
GPN1-202ENST00000407583 PKD1L3Q7Z443 1732 aa12.3□□□□□ -0.44
GPN1-202ENST00000407583 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
GPN1-202ENST00000407583 CCNL1Q9UK58 526 aaPredicted RBP12.3□□□□□ -0.44
GPN1-202ENST00000407583 LY75O60449 1722 aa12.29□□□□□ -0.44
GPN1-202ENST00000407583 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
GPN1-202ENST00000407583 CPSF1Q10570 1443 aaKnown RBP12.29□□□□□ -0.44
GPN1-202ENST00000407583 SMIM5Q71RC9 77 aa12.27□□□□□ -0.45
GPN1-202ENST00000407583 ADGRB1O14514 1584 aa12.27□□□□□ -0.45
GPN1-202ENST00000407583 KIAA1551Q9HCM1 1747 aa12.26□□□□□ -0.45
GPN1-202ENST00000407583 NSD2O96028 1365 aa12.26□□□□□ -0.45
GPN1-202ENST00000407583 USP54Q70EL1 1684 aa12.26□□□□□ -0.45
GPN1-202ENST00000407583 HSPA8P11142 646 aaKnown RBP12.26□□□□□ -0.45
GPN1-202ENST00000407583 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
GPN1-202ENST00000407583 CREBZFQ9NS37 354 aa12.26□□□□□ -0.45
GPN1-202ENST00000407583 PDE4DIPQ5VU43 2346 aa12.26□□□□□ -0.45
GPN1-202ENST00000407583 CNTNAP1P78357 1384 aa12.25□□□□□ -0.45
GPN1-202ENST00000407583 ERBB3P21860 1342 aa12.25□□□□□ -0.45
GPN1-202ENST00000407583 SYTL4Q96C24 671 aaPredicted RBP12.25□□□□□ -0.45
GPN1-202ENST00000407583 RNF181Q9P0P0 153 aa12.25□□□□□ -0.45
GPN1-202ENST00000407583 RGPD5Q99666 1765 aa12.25□□□□□ -0.45
GPN1-202ENST00000407583 PLEKHG3A1L390 1219 aa12.24□□□□□ -0.45
GPN1-202ENST00000407583 NLRP6P59044 892 aa12.24□□□□□ -0.45
GPN1-202ENST00000407583 AMIGO3Q86WK7 504 aa12.24□□□□□ -0.45
GPN1-202ENST00000407583 WBP1LQ9NX94 342 aa12.24□□□□□ -0.45
GPN1-202ENST00000407583 KAT6BQ8WYB5 2073 aa12.23□□□□□ -0.45
GPN1-202ENST00000407583 A0A0G2JLW4 131 aa12.23□□□□□ -0.45
GPN1-202ENST00000407583 NEFLP07196 543 aa12.23□□□□□ -0.45
GPN1-202ENST00000407583 ARHGEF25Q86VW2 580 aa12.23□□□□□ -0.45
GPN1-202ENST00000407583 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
GPN1-202ENST00000407583 N4BP2Q86UW6 1770 aaPredicted RBP12.22□□□□□ -0.45
GPN1-202ENST00000407583 FCHSD2O94868 740 aa12.22□□□□□ -0.45
GPN1-202ENST00000407583 IL2RBP14784 551 aa12.22□□□□□ -0.45
GPN1-202ENST00000407583 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
GPN1-202ENST00000407583 POTEHQ6S545 545 aa12.22□□□□□ -0.45
GPN1-202ENST00000407583 FLAD1Q8NFF5 587 aa12.22□□□□□ -0.45
GPN1-202ENST00000407583 CCDC61Q9Y6R9 512 aa12.22□□□□□ -0.45
GPN1-202ENST00000407583 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
GPN1-202ENST00000407583 CDK19Q9BWU1 502 aa12.21□□□□□ -0.45
GPN1-202ENST00000407583 ANKRD36BQ8N2N9 1353 aa12.21□□□□□ -0.45
GPN1-202ENST00000407583 C5P01031 1676 aa12.2□□□□□ -0.46
GPN1-202ENST00000407583 VEGFAP15692 232 aaPredicted RBP12.2□□□□□ -0.46
GPN1-202ENST00000407583 VEGFBP49765 207 aa12.2□□□□□ -0.46
GPN1-202ENST00000407583 TOGARAM1Q9Y4F4 1720 aa12.2□□□□□ -0.46
GPN1-202ENST00000407583 SOX12O15370 315 aa12.19□□□□□ -0.46
GPN1-202ENST00000407583 PRPF38BQ5VTL8 546 aaKnown RBP12.19□□□□□ -0.46
GPN1-202ENST00000407583 DDX54Q8TDD1 881 aaKnown RBP12.19□□□□□ -0.46
GPN1-202ENST00000407583 DOT1LQ8TEK3 1739 aa12.19□□□□□ -0.46
GPN1-202ENST00000407583 PHF14O94880 888 aa12.18□□□□□ -0.46
GPN1-202ENST00000407583 DPEP1P16444 411 aa12.18□□□□□ -0.46
GPN1-202ENST00000407583 TGFB2P61812 414 aa12.18□□□□□ -0.46
GPN1-202ENST00000407583 ANP32EQ9BTT0 268 aa12.18□□□□□ -0.46
GPN1-202ENST00000407583 KIF13BQ9NQT8 1826 aa12.18□□□□□ -0.46
GPN1-202ENST00000407583 ERICH6BQ5W0A0 696 aa12.18□□□□□ -0.46
GPN1-202ENST00000407583 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
GPN1-202ENST00000407583 NLRP2Q9NX02 1062 aa12.18□□□□□ -0.46
GPN1-202ENST00000407583 USP47Q96K76 1375 aa12.17□□□□□ -0.46
GPN1-202ENST00000407583 ANP32CO43423 234 aa12.17□□□□□ -0.46
GPN1-202ENST00000407583 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
GPN1-202ENST00000407583 BRCA1P38398 1863 aaKnown RBP12.15□□□□□ -0.46
GPN1-202ENST00000407583 MMP10P09238 476 aa12.15□□□□□ -0.46
GPN1-202ENST00000407583 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
GPN1-202ENST00000407583 VIRMAQ69YN4 1812 aaKnown RBP12.15□□□□□ -0.46
GPN1-202ENST00000407583 TONSLQ96HA7 1378 aa12.14□□□□□ -0.47
GPN1-202ENST00000407583 NFAT5O94916 1531 aa12.14□□□□□ -0.47
GPN1-202ENST00000407583 GLTPD2A6NH11 291 aa12.14□□□□□ -0.47
GPN1-202ENST00000407583 POTECB2RU33 542 aa12.14□□□□□ -0.47
GPN1-202ENST00000407583 C4BP0C0L5 1744 aa12.14□□□□□ -0.47
GPN1-202ENST00000407583 AK7Q96M32 723 aa12.14□□□□□ -0.47
GPN1-202ENST00000407583 ARFGEF1Q9Y6D6 1849 aa12.13□□□□□ -0.47
GPN1-202ENST00000407583 KCNA3P22001 575 aa12.13□□□□□ -0.47
GPN1-202ENST00000407583 MCOLN1Q9GZU1 580 aa12.13□□□□□ -0.47
GPN1-202ENST00000407583 TAF1LQ8IZX4 1826 aa12.12□□□□□ -0.47
GPN1-202ENST00000407583 RASSF7Q02833 373 aa12.12□□□□□ -0.47
GPN1-202ENST00000407583 KCNH5Q8NCM2 988 aa12.12□□□□□ -0.47
GPN1-202ENST00000407583 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms