RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 MARCH10Q8NA82 808 aaPredicted RBP13.93□□□□□ -0.18
TSPAN9-202ENST00000407263 EYA1Q99502 592 aa13.93□□□□□ -0.18
TSPAN9-202ENST00000407263 PARD3Q8TEW0 1356 aa13.93□□□□□ -0.18
TSPAN9-202ENST00000407263 EXOC5O00471 708 aa13.92□□□□□ -0.18
TSPAN9-202ENST00000407263 RAPGEF4Q8WZA2 1011 aa13.92□□□□□ -0.18
TSPAN9-202ENST00000407263 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
TSPAN9-202ENST00000407263 TRIM37O94972 964 aa13.91□□□□□ -0.18
TSPAN9-202ENST00000407263 FAM196AQ6ZSG2 479 aa13.91□□□□□ -0.18
TSPAN9-202ENST00000407263 TATP17735 454 aaPredicted RBP13.9□□□□□ -0.18
TSPAN9-202ENST00000407263 SF3B2Q13435 895 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-202ENST00000407263 SCN11AQ9UI33 1791 aa13.9□□□□□ -0.18
TSPAN9-202ENST00000407263 ZNF316A6NFI3 1004 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-202ENST00000407263 PPP2R1AP30153 589 aa13.89□□□□□ -0.19
TSPAN9-202ENST00000407263 DEFB132Q7Z7B7 95 aa13.89□□□□□ -0.19
TSPAN9-202ENST00000407263 AEBP1Q8IUX7 1158 aa13.89□□□□□ -0.19
TSPAN9-202ENST00000407263 DDX54Q8TDD1 881 aaKnown RBP13.89□□□□□ -0.19
TSPAN9-202ENST00000407263 LY75O60449 1722 aa13.89□□□□□ -0.19
TSPAN9-202ENST00000407263 IL13P35225 146 aa13.88□□□□□ -0.19
TSPAN9-202ENST00000407263 ZCRB1Q8TBF4 217 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-202ENST00000407263 BCL9O00512 1426 aa13.88□□□□□ -0.19
TSPAN9-202ENST00000407263 DLG5Q8TDM6 1919 aa13.88□□□□□ -0.19
TSPAN9-202ENST00000407263 PCDH11XQ9BZA7 1347 aa13.88□□□□□ -0.19
TSPAN9-202ENST00000407263 PCDH11YQ9BZA8 1340 aa13.88□□□□□ -0.19
TSPAN9-202ENST00000407263 DIAPH1O60610 1272 aaKnown RBP13.87□□□□□ -0.19
TSPAN9-202ENST00000407263 PTF1AQ7RTS3 328 aa13.87□□□□□ -0.19
TSPAN9-202ENST00000407263 ACSBG1Q96GR2 724 aa13.87□□□□□ -0.19
TSPAN9-202ENST00000407263 KDRP35968 1356 aa13.86□□□□□ -0.19
TSPAN9-202ENST00000407263 HMOX1P09601 288 aa13.86□□□□□ -0.19
TSPAN9-202ENST00000407263 BAG6P46379 1132 aa13.86□□□□□ -0.19
TSPAN9-202ENST00000407263 SULT6B1Q6IMI4 303 aa13.86□□□□□ -0.19
TSPAN9-202ENST00000407263 CCDC125Q86Z20 511 aa13.86□□□□□ -0.19
TSPAN9-202ENST00000407263 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
TSPAN9-202ENST00000407263 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
TSPAN9-202ENST00000407263 TUBGCP6Q96RT7 1819 aa13.85□□□□□ -0.19
TSPAN9-202ENST00000407263 EN1Q05925 392 aaPredicted RBP13.84□□□□□ -0.19
TSPAN9-202ENST00000407263 C5P01031 1676 aa13.84□□□□□ -0.19
TSPAN9-202ENST00000407263 TAF1LQ8IZX4 1826 aa13.83□□□□□ -0.2
TSPAN9-202ENST00000407263 KCNQ2O43526 872 aa13.83□□□□□ -0.2
TSPAN9-202ENST00000407263 APBA3O96018 575 aa13.83□□□□□ -0.2
TSPAN9-202ENST00000407263 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
TSPAN9-202ENST00000407263 ADAMTS7Q9UKP4 1686 aa13.82□□□□□ -0.2
TSPAN9-202ENST00000407263 CYP27B1O15528 508 aa13.82□□□□□ -0.2
TSPAN9-202ENST00000407263 SYTL4Q96C24 671 aaPredicted RBP13.82□□□□□ -0.2
TSPAN9-202ENST00000407263 SPG7Q9UQ90 795 aa13.82□□□□□ -0.2
TSPAN9-202ENST00000407263 SIPA1L3O60292 1781 aaPredicted RBP13.81□□□□□ -0.2
TSPAN9-202ENST00000407263 EZH2Q15910 746 aaKnown RBP13.81□□□□□ -0.2
TSPAN9-202ENST00000407263 MYBBP1AQ9BQG0 1328 aaKnown RBP13.81□□□□□ -0.2
TSPAN9-202ENST00000407263 PLEKHG2Q9H7P9 1386 aa13.81□□□□□ -0.2
TSPAN9-202ENST00000407263 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
TSPAN9-202ENST00000407263 RALBP1Q15311 655 aa13.8□□□□□ -0.2
TSPAN9-202ENST00000407263 ZNF530Q6P9A1 599 aaPredicted RBP13.8□□□□□ -0.2
TSPAN9-202ENST00000407263 BCL11BQ9C0K0 894 aaPredicted RBP13.8□□□□□ -0.2
TSPAN9-202ENST00000407263 PHKG2P15735 406 aa13.79□□□□□ -0.2
TSPAN9-202ENST00000407263 PLEKHO1Q53GL0 409 aaPredicted RBP13.78□□□□□ -0.2
TSPAN9-202ENST00000407263 IFNL2Q8IZJ0 200 aa13.78□□□□□ -0.2
TSPAN9-202ENST00000407263 PRKRIP1Q9H875 184 aaPredicted RBP13.78□□□□□ -0.2
TSPAN9-202ENST00000407263 U2AF1L5P0DN76 240 aaPredicted RBP13.77□□□□□ -0.21
TSPAN9-202ENST00000407263 PRIM1P49642 420 aaKnown RBP13.77□□□□□ -0.21
TSPAN9-202ENST00000407263 U2AF1Q01081 240 aaKnown RBP eCLIP13.77□□□□□ -0.21
TSPAN9-202ENST00000407263 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
TSPAN9-202ENST00000407263 CAMKK2Q96RR4 588 aa13.77□□□□□ -0.21
TSPAN9-202ENST00000407263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.21
TSPAN9-202ENST00000407263 NUDCQ9Y266 331 aa13.77□□□□□ -0.21
TSPAN9-202ENST00000407263 UBR2Q8IWV8 1755 aa13.76□□□□□ -0.21
TSPAN9-202ENST00000407263 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
TSPAN9-202ENST00000407263 MRC1P22897 1456 aa13.76□□□□□ -0.21
TSPAN9-202ENST00000407263 PRKAR2BP31323 418 aa13.76□□□□□ -0.21
TSPAN9-202ENST00000407263 AMOTQ4VCS5 1084 aa13.76□□□□□ -0.21
TSPAN9-202ENST00000407263 C1orf141Q5JVX7 400 aa13.76□□□□□ -0.21
TSPAN9-202ENST00000407263 CASZ1Q86V15 1759 aa13.76□□□□□ -0.21
TSPAN9-202ENST00000407263 TJP1Q07157 1748 aa13.76□□□□□ -0.21
TSPAN9-202ENST00000407263 MPRIPQ6WCQ1 1025 aa13.75□□□□□ -0.21
TSPAN9-202ENST00000407263 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
TSPAN9-202ENST00000407263 MTHFSDQ2M296 383 aaKnown RBP13.74□□□□□ -0.21
TSPAN9-202ENST00000407263 C4BP0C0L5 1744 aa13.73□□□□□ -0.21
TSPAN9-202ENST00000407263 PSDA5PKW4 1024 aaPredicted RBP13.73□□□□□ -0.21
TSPAN9-202ENST00000407263 NKX1-1Q15270 411 aaPredicted RBP13.73□□□□□ -0.21
TSPAN9-202ENST00000407263 ZNF831Q5JPB2 1677 aa13.72□□□□□ -0.21
TSPAN9-202ENST00000407263 PALLDQ8WX93 1383 aa13.72□□□□□ -0.21
TSPAN9-202ENST00000407263 MAP3K5Q99683 1374 aa13.72□□□□□ -0.21
TSPAN9-202ENST00000407263 UBR3Q6ZT12 1888 aa13.72□□□□□ -0.21
TSPAN9-202ENST00000407263 PLSCR1O15162 318 aa13.72□□□□□ -0.21
TSPAN9-202ENST00000407263 TXNRD1Q16881 649 aa13.72□□□□□ -0.21
TSPAN9-202ENST00000407263 TMOD3Q9NYL9 352 aa13.72□□□□□ -0.21
TSPAN9-202ENST00000407263 CICQ96RK0 1608 aaPredicted RBP13.72□□□□□ -0.21
TSPAN9-202ENST00000407263 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.21
TSPAN9-202ENST00000407263 HSP90AB1P08238 724 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-202ENST00000407263 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.21
TSPAN9-202ENST00000407263 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.21
TSPAN9-202ENST00000407263 KCNQ4P56696 695 aa13.7□□□□□ -0.22
TSPAN9-202ENST00000407263 PIGBQ92521 554 aa13.7□□□□□ -0.22
TSPAN9-202ENST00000407263 DCAF5Q96JK2 942 aa13.7□□□□□ -0.22
TSPAN9-202ENST00000407263 PHACTR3Q96KR7 559 aa13.7□□□□□ -0.22
TSPAN9-202ENST00000407263 LRP5O75197 1615 aa13.69□□□□□ -0.22
TSPAN9-202ENST00000407263 ANP32CO43423 234 aa13.69□□□□□ -0.22
TSPAN9-202ENST00000407263 R3HDM1Q15032 1099 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-202ENST00000407263 PROM2Q8N271 834 aa13.69□□□□□ -0.22
TSPAN9-202ENST00000407263 GAS2L2Q8NHY3 880 aa13.69□□□□□ -0.22
TSPAN9-202ENST00000407263 C4AP0C0L4 1744 aa13.69□□□□□ -0.22
TSPAN9-202ENST00000407263 MAPK8IP3Q9UPT6 1336 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms