RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 PARP4Q9UKK3 1724 aaKnown RBP26.89■■□□□ 1.89
CHKB-201ENST00000406938 DLG5Q8TDM6 1919 aa26.88■■□□□ 1.89
CHKB-201ENST00000406938 OVOS2A0A0G2JMS6 1433 aa26.88■■□□□ 1.89
CHKB-201ENST00000406938 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.87■■□□□ 1.89
CHKB-201ENST00000406938 PLEKHO1Q53GL0 409 aaPredicted RBP26.87■■□□□ 1.89
CHKB-201ENST00000406938 AMOTQ4VCS5 1084 aa26.87■■□□□ 1.89
CHKB-201ENST00000406938 CENPBP07199 599 aaPredicted RBP26.86■■□□□ 1.89
CHKB-201ENST00000406938 IL2RBP14784 551 aa26.86■■□□□ 1.89
CHKB-201ENST00000406938 USP21Q9UK80 565 aa26.86■■□□□ 1.89
CHKB-201ENST00000406938 SPATA31A1Q5TZJ5 1347 aa26.86■■□□□ 1.89
CHKB-201ENST00000406938 PKD1L3Q7Z443 1732 aa26.85■■□□□ 1.89
CHKB-201ENST00000406938 LMOD3Q0VAK6 560 aa26.85■■□□□ 1.89
CHKB-201ENST00000406938 AFF2P51816 1311 aa26.85■■□□□ 1.89
CHKB-201ENST00000406938 SPATA31A5Q5VU36 1347 aa26.85■■□□□ 1.89
CHKB-201ENST00000406938 SPATA31A7Q8IWB4 1347 aa26.85■■□□□ 1.89
CHKB-201ENST00000406938 DISP2A7MBM2 1401 aa26.84■■□□□ 1.89
CHKB-201ENST00000406938 ZNF530Q6P9A1 599 aaPredicted RBP26.83■■□□□ 1.89
CHKB-201ENST00000406938 MAP3K5Q99683 1374 aa26.83■■□□□ 1.89
CHKB-201ENST00000406938 WNK3Q9BYP7 1800 aa26.83■■□□□ 1.89
CHKB-201ENST00000406938 GOLGA2Q08379 1002 aa26.83■■□□□ 1.88
CHKB-201ENST00000406938 PDE3BQ13370 1112 aa26.83■■□□□ 1.88
CHKB-201ENST00000406938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.83■■□□□ 1.883e-8■□□□□ 11.2
CHKB-201ENST00000406938 CCDC9Q9Y3X0 531 aaKnown RBP26.83■■□□□ 1.88
CHKB-201ENST00000406938 VPS72Q15906 364 aa26.82■■□□□ 1.88
CHKB-201ENST00000406938 CDCA7LQ96GN5 454 aa26.82■■□□□ 1.88
CHKB-201ENST00000406938 SPG7Q9UQ90 795 aa26.81■■□□□ 1.88
CHKB-201ENST00000406938 GNAT3A8MTJ3 354 aa26.8■■□□□ 1.88
CHKB-201ENST00000406938 WDR63Q8IWG1 891 aa26.8■■□□□ 1.88
CHKB-201ENST00000406938 THRAP3Q9Y2W1 955 aaKnown RBP26.8■■□□□ 1.88
CHKB-201ENST00000406938 DCTN1Q14203 1278 aa26.79■■□□□ 1.88
CHKB-201ENST00000406938 THUMPD2Q9BTF0 503 aaKnown RBP26.79■■□□□ 1.88
CHKB-201ENST00000406938 AKAP4Q5JQC9 854 aa26.79■■□□□ 1.88
CHKB-201ENST00000406938 C1orf141Q5JVX7 400 aa26.78■■□□□ 1.88
CHKB-201ENST00000406938 MCM10Q7L590 875 aa26.78■■□□□ 1.88
CHKB-201ENST00000406938 RTF1Q92541 710 aaKnown RBP26.78■■□□□ 1.88
CHKB-201ENST00000406938 SPINK5Q9NQ38 1064 aaPredicted RBP26.78■■□□□ 1.88
CHKB-201ENST00000406938 HTATSF1O43719 755 aaKnown RBP26.76■■□□□ 1.87
CHKB-201ENST00000406938 ZCRB1Q8TBF4 217 aaKnown RBP26.76■■□□□ 1.87
CHKB-201ENST00000406938 LRRC37A3O60309 1634 aa26.75■■□□□ 1.87
CHKB-201ENST00000406938 SHANK3Q9BYB0 1731 aa26.75■■□□□ 1.87
CHKB-201ENST00000406938 PCDH11XQ9BZA7 1347 aa26.75■■□□□ 1.87
CHKB-201ENST00000406938 PCDH11YQ9BZA8 1340 aa26.75■■□□□ 1.87
CHKB-201ENST00000406938 E9PSI1 815 aa26.75■■□□□ 1.87
CHKB-201ENST00000406938 SLFN5Q08AF3 891 aa26.75■■□□□ 1.87
CHKB-201ENST00000406938 ATRNO75882 1429 aa26.75■■□□□ 1.87
CHKB-201ENST00000406938 IL16Q14005 1332 aa26.74■■□□□ 1.87
CHKB-201ENST00000406938 PHKG2P15735 406 aa26.74■■□□□ 1.87
CHKB-201ENST00000406938 CALD1Q05682 793 aaKnown RBP26.74■■□□□ 1.87
CHKB-201ENST00000406938 BARGINQ6ZT62 677 aa26.74■■□□□ 1.87
CHKB-201ENST00000406938 CYP27B1O15528 508 aa26.73■■□□□ 1.87
CHKB-201ENST00000406938 CDCA7Q9BWT1 371 aaPredicted RBP26.73■■□□□ 1.87
CHKB-201ENST00000406938 IFNL2Q8IZJ0 200 aa26.72■■□□□ 1.87
CHKB-201ENST00000406938 TNS2Q63HR2 1409 aa26.72■■□□□ 1.87
CHKB-201ENST00000406938 GLI3P10071 1580 aa26.71■■□□□ 1.87
CHKB-201ENST00000406938 CEMIPQ8WUJ3 1361 aa26.71■■□□□ 1.87
CHKB-201ENST00000406938 DUSP27Q5VZP5 1158 aa26.71■■□□□ 1.87
CHKB-201ENST00000406938 IL17REQ8NFR9 667 aa26.71■■□□□ 1.87
CHKB-201ENST00000406938 TRPC5Q9UL62 973 aaPredicted RBP26.71■■□□□ 1.87
CHKB-201ENST00000406938 ADAMTS7Q9UKP4 1686 aa26.7■■□□□ 1.87
CHKB-201ENST00000406938 MPRIPQ6WCQ1 1025 aa26.7■■□□□ 1.86
CHKB-201ENST00000406938 TRMT2AQ8IZ69 625 aaKnown RBP26.7■■□□□ 1.86
CHKB-201ENST00000406938 FAM98CQ17RN3 349 aaKnown RBP26.69■■□□□ 1.86
CHKB-201ENST00000406938 KDM6AO15550 1401 aaPredicted RBP26.69■■□□□ 1.86
CHKB-201ENST00000406938 GJD4Q96KN9 370 aaPredicted RBP26.68■■□□□ 1.86
CHKB-201ENST00000406938 MYH16Q9H6N6 1097 aa26.68■■□□□ 1.86
CHKB-201ENST00000406938 LGR6Q9HBX8 967 aa26.68■■□□□ 1.86
CHKB-201ENST00000406938 DDX54Q8TDD1 881 aaKnown RBP26.68■■□□□ 1.86
CHKB-201ENST00000406938 IFT57Q9NWB7 429 aa26.68■■□□□ 1.86
CHKB-201ENST00000406938 RNMTO43148 476 aaKnown RBP26.67■■□□□ 1.86
CHKB-201ENST00000406938 LAS1LQ9Y4W2 734 aaKnown RBP26.67■■□□□ 1.86
CHKB-201ENST00000406938 EXOC5O00471 708 aa26.66■■□□□ 1.86
CHKB-201ENST00000406938 FANCIQ9NVI1 1328 aa26.66■■□□□ 1.86
CHKB-201ENST00000406938 THSD7AQ9UPZ6 1657 aa26.66■■□□□ 1.86
CHKB-201ENST00000406938 HSP90AB1P08238 724 aaKnown RBP26.65■■□□□ 1.86
CHKB-201ENST00000406938 ZNF853P0CG23 659 aa26.65■■□□□ 1.86
CHKB-201ENST00000406938 GNAI1P63096 354 aa26.65■■□□□ 1.86
CHKB-201ENST00000406938 TSR2Q969E8 191 aaKnown RBP26.65■■□□□ 1.86
CHKB-201ENST00000406938 CFAP44Q96MT7 982 aa26.65■■□□□ 1.86
CHKB-201ENST00000406938 VIRMAQ69YN4 1812 aaKnown RBP26.65■■□□□ 1.86
CHKB-201ENST00000406938 DDB1Q16531 1140 aa26.65■■□□□ 1.86
CHKB-201ENST00000406938 DCAF5Q96JK2 942 aa26.65■■□□□ 1.86
CHKB-201ENST00000406938 QTRT2Q9H974 415 aaKnown RBP26.65■■□□□ 1.86
CHKB-201ENST00000406938 SCN11AQ9UI33 1791 aa26.64■■□□□ 1.85
CHKB-201ENST00000406938 ZNF772Q68DY9 489 aaPredicted RBP26.63■■□□□ 1.85
CHKB-201ENST00000406938 NKX1-1Q15270 411 aaPredicted RBP26.62■■□□□ 1.85
CHKB-201ENST00000406938 MBIPQ9NS73 344 aa26.61■■□□□ 1.85
CHKB-201ENST00000406938 MRC1P22897 1456 aa26.61■■□□□ 1.85
CHKB-201ENST00000406938 A0A0G2JS52 829 aa26.61■■□□□ 1.85
CHKB-201ENST00000406938 MYT1Q01538 1121 aa26.61■■□□□ 1.85
CHKB-201ENST00000406938 TEFQ10587 303 aa26.61■■□□□ 1.85
CHKB-201ENST00000406938 CHL1O00533 1208 aa26.6■■□□□ 1.85
CHKB-201ENST00000406938 TAF7Q15545 349 aaPredicted RBP26.58■■□□□ 1.85
CHKB-201ENST00000406938 MIS18AQ9NYP9 233 aa26.57■■□□□ 1.84
CHKB-201ENST00000406938 TSPYL4Q9UJ04 414 aa26.57■■□□□ 1.84
CHKB-201ENST00000406938 SIPA1L3O60292 1781 aaPredicted RBP26.57■■□□□ 1.84
CHKB-201ENST00000406938 TOGARAM1Q9Y4F4 1720 aa26.57■■□□□ 1.84
CHKB-201ENST00000406938 SLC52A2Q9HAB3 445 aa26.57■■□□□ 1.84
CHKB-201ENST00000406938 ONECUT3O60422 494 aaPredicted RBP26.55■■□□□ 1.84
CHKB-201ENST00000406938 EXOSC9Q06265 439 aaKnown RBP26.54■■□□□ 1.84
CHKB-201ENST00000406938 MARCH10Q8NA82 808 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms