RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 GNAT3A8MTJ3 354 aa17.25■□□□□ 0.35
PCNX4-203ENST00000406854 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
PCNX4-203ENST00000406854 MAP3K11Q16584 847 aa17.25■□□□□ 0.35
PCNX4-203ENST00000406854 TTC39AQ5SRH9 613 aa17.25■□□□□ 0.35
PCNX4-203ENST00000406854 CCDC66A2RUB6 948 aa17.25■□□□□ 0.35
PCNX4-203ENST00000406854 EMILIN1Q9Y6C2 1016 aa17.25■□□□□ 0.35
PCNX4-203ENST00000406854 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
PCNX4-203ENST00000406854 THEMISQ8N1K5 641 aaPredicted RBP17.25■□□□□ 0.35
PCNX4-203ENST00000406854 TBC1D9Q6ZT07 1266 aa17.24■□□□□ 0.35
PCNX4-203ENST00000406854 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.24■□□□□ 0.35
PCNX4-203ENST00000406854 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
PCNX4-203ENST00000406854 FAM177BA6PVY3 158 aa17.24■□□□□ 0.35
PCNX4-203ENST00000406854 BTBD11A6QL63 1104 aa17.24■□□□□ 0.35
PCNX4-203ENST00000406854 CCDC83Q8IWF9 413 aa17.24■□□□□ 0.35
PCNX4-203ENST00000406854 SMARCE1Q969G3 411 aa17.24■□□□□ 0.35
PCNX4-203ENST00000406854 CNNM1Q9NRU3 951 aa17.24■□□□□ 0.35
PCNX4-203ENST00000406854 MTMR7Q9Y216 660 aa17.24■□□□□ 0.35
PCNX4-203ENST00000406854 F6X3S4 739 aa17.24■□□□□ 0.35
PCNX4-203ENST00000406854 NME9Q86XW9 330 aa17.24■□□□□ 0.35
PCNX4-203ENST00000406854 ERCC4Q92889 916 aaPredicted RBP17.24■□□□□ 0.35
PCNX4-203ENST00000406854 TRIM22Q8IYM9 498 aa17.23■□□□□ 0.35
PCNX4-203ENST00000406854 CAGE1Q8TC20 777 aa17.23■□□□□ 0.35
PCNX4-203ENST00000406854 RBM33Q96EV2 1170 aaKnown RBP17.23■□□□□ 0.35
PCNX4-203ENST00000406854 PCDHB15Q9Y5E8 787 aa17.23■□□□□ 0.35
PCNX4-203ENST00000406854 CUL7Q14999 1698 aa17.23■□□□□ 0.35
PCNX4-203ENST00000406854 RAB11FIP3O75154 756 aa17.23■□□□□ 0.35
PCNX4-203ENST00000406854 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
PCNX4-203ENST00000406854 CEP126Q9P2H0 1117 aa17.23■□□□□ 0.35
PCNX4-203ENST00000406854 FKBP4Q02790 459 aaKnown RBP eCLIP17.22■□□□□ 0.35
PCNX4-203ENST00000406854 DDX11Q96FC9 970 aa17.22■□□□□ 0.35
PCNX4-203ENST00000406854 TXLNAP40222 546 aa17.22■□□□□ 0.35
PCNX4-203ENST00000406854 CABP4P57796 275 aa17.22■□□□□ 0.35
PCNX4-203ENST00000406854 PRPF40BQ6NWY9 871 aaKnown RBP17.22■□□□□ 0.35
PCNX4-203ENST00000406854 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
PCNX4-203ENST00000406854 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
PCNX4-203ENST00000406854 PROSER2Q86WR7 435 aaPredicted RBP17.21■□□□□ 0.35
PCNX4-203ENST00000406854 PIP4K2AP48426 406 aaPredicted RBP17.21■□□□□ 0.35
PCNX4-203ENST00000406854 NOM1Q5C9Z4 860 aaKnown RBP17.21■□□□□ 0.35
PCNX4-203ENST00000406854 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
PCNX4-203ENST00000406854 CDR1P51861 262 aa17.21■□□□□ 0.35
PCNX4-203ENST00000406854 CCDC57Q2TAC2 916 aa17.21■□□□□ 0.35
PCNX4-203ENST00000406854 CCDC183Q5T5S1 534 aa17.2■□□□□ 0.34
PCNX4-203ENST00000406854 BAG4O95429 457 aaKnown RBP17.2■□□□□ 0.34
PCNX4-203ENST00000406854 SCAND2PQ9GZW5 306 aaPredicted RBP17.2■□□□□ 0.34
PCNX4-203ENST00000406854 CWC15Q9P013 229 aaKnown RBP17.2■□□□□ 0.34
PCNX4-203ENST00000406854 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
PCNX4-203ENST00000406854 NACAP1Q9BZK3 213 aa17.2■□□□□ 0.34
PCNX4-203ENST00000406854 HDAC1Q13547 482 aaPredicted RBP17.19■□□□□ 0.34
PCNX4-203ENST00000406854 CAMK4Q16566 473 aa17.19■□□□□ 0.34
PCNX4-203ENST00000406854 PPFIBP1Q86W92 1011 aa17.19■□□□□ 0.34
PCNX4-203ENST00000406854 FAM177A1Q8N128 213 aaPredicted RBP17.19■□□□□ 0.34
PCNX4-203ENST00000406854 SH2B1Q9NRF2 756 aaPredicted RBP17.19■□□□□ 0.34
PCNX4-203ENST00000406854 SPG7Q9UQ90 795 aa17.19■□□□□ 0.34
PCNX4-203ENST00000406854 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
PCNX4-203ENST00000406854 TAF7Q15545 349 aaPredicted RBP17.18■□□□□ 0.34
PCNX4-203ENST00000406854 DDX54Q8TDD1 881 aaKnown RBP17.18■□□□□ 0.34
PCNX4-203ENST00000406854 DACH1Q9UI36 760 aa17.18■□□□□ 0.34
PCNX4-203ENST00000406854 LIMCH1Q9UPQ0 1083 aa17.18■□□□□ 0.34
PCNX4-203ENST00000406854 IDI1Q13907 227 aa17.18■□□□□ 0.34
PCNX4-203ENST00000406854 EPS15P42566 896 aa17.18■□□□□ 0.34
PCNX4-203ENST00000406854 STK11IPQ8N1F8 1099 aa17.18■□□□□ 0.34
PCNX4-203ENST00000406854 IL16Q14005 1332 aa17.18■□□□□ 0.34
PCNX4-203ENST00000406854 MAGEC2Q9UBF1 373 aaPredicted RBP17.18■□□□□ 0.34
PCNX4-203ENST00000406854 LRRFIP2Q9Y608 721 aaKnown RBP17.18■□□□□ 0.34
PCNX4-203ENST00000406854 NSD2O96028 1365 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 CBFA2T2O43439 604 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 KLHL40Q2TBA0 621 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 C8orf34Q49A92 452 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 CDKL5O76039 1030 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 PKNOX2Q96KN3 472 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 BOLA2Q9H3K6 86 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 ZSCAN25Q6NSZ9 544 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 C14orf93Q9H972 538 aaKnown RBP17.17■□□□□ 0.34
PCNX4-203ENST00000406854 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 GDPD2Q9HCC8 539 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 USP25Q9UHP3 1055 aa17.17■□□□□ 0.34
PCNX4-203ENST00000406854 PTPRCP08575 1304 aa17.16■□□□□ 0.34
PCNX4-203ENST00000406854 PDCL2Q8N4E4 241 aa17.16■□□□□ 0.34
PCNX4-203ENST00000406854 CCDC43Q96MW1 224 aaKnown RBP17.16■□□□□ 0.34
PCNX4-203ENST00000406854 PLEKHH1Q9ULM0 1364 aa17.16■□□□□ 0.34
PCNX4-203ENST00000406854 PATL2C9JE40 543 aaKnown RBP17.16■□□□□ 0.34
PCNX4-203ENST00000406854 SLC3A2P08195 630 aaKnown RBP17.16■□□□□ 0.34
PCNX4-203ENST00000406854 CCDC69A6NI79 296 aa17.16■□□□□ 0.34
PCNX4-203ENST00000406854 ZNHIT6Q9NWK9 470 aaKnown RBP17.16■□□□□ 0.34
PCNX4-203ENST00000406854 NUCB1Q02818 461 aa17.15■□□□□ 0.34
PCNX4-203ENST00000406854 FLIIQ13045 1269 aa17.15■□□□□ 0.34
PCNX4-203ENST00000406854 NUP133Q8WUM0 1156 aa17.15■□□□□ 0.34
PCNX4-203ENST00000406854 STRN4Q9NRL3 753 aa17.15■□□□□ 0.34
PCNX4-203ENST00000406854 MBIPQ9NS73 344 aa17.15■□□□□ 0.34
PCNX4-203ENST00000406854 CTDP1Q9Y5B0 961 aaPredicted RBP17.15■□□□□ 0.34
PCNX4-203ENST00000406854 KIF14Q15058 1648 aa17.14■□□□□ 0.33
PCNX4-203ENST00000406854 SMTNL1A8MU46 457 aa17.14■□□□□ 0.33
PCNX4-203ENST00000406854 GNL3LQ9NVN8 582 aaKnown RBP17.14■□□□□ 0.33
PCNX4-203ENST00000406854 RALGAPBQ86X10 1494 aa17.14■□□□□ 0.33
PCNX4-203ENST00000406854 TTC22Q5TAA0 569 aa17.14■□□□□ 0.33
PCNX4-203ENST00000406854 U3KPZ7 1027 aaPredicted RBP17.14■□□□□ 0.33
PCNX4-203ENST00000406854 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.33
PCNX4-203ENST00000406854 WASLO00401 505 aaPredicted RBP17.13■□□□□ 0.33
PCNX4-203ENST00000406854 CT47A1Q5JQC4 288 aaPredicted RBP17.13■□□□□ 0.33
PCNX4-203ENST00000406854 DNAAF4Q8WXU2 420 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms