RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 NBPF14Q5TI25 921 aa11.29□□□□□ -0.6
GPC3-203ENST00000406757 PIK3C2AO00443 1686 aa11.29□□□□□ -0.6
GPC3-203ENST00000406757 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
GPC3-203ENST00000406757 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
GPC3-203ENST00000406757 RRS1Q15050 365 aaKnown RBP11.28□□□□□ -0.6
GPC3-203ENST00000406757 TOM1L2Q6ZVM7 507 aa11.28□□□□□ -0.6
GPC3-203ENST00000406757 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
GPC3-203ENST00000406757 BRD4O60885 1362 aaPredicted RBP11.28□□□□□ -0.6
GPC3-203ENST00000406757 AATKQ6ZMQ8 1374 aa11.28□□□□□ -0.6
GPC3-203ENST00000406757 SLIT3O75094 1523 aa11.27□□□□□ -0.61
GPC3-203ENST00000406757 AXIN2Q9Y2T1 843 aa11.27□□□□□ -0.61
GPC3-203ENST00000406757 MYBBP1AQ9BQG0 1328 aaKnown RBP11.27□□□□□ -0.61
GPC3-203ENST00000406757 NSD2O96028 1365 aa11.27□□□□□ -0.61
GPC3-203ENST00000406757 USP31Q70CQ4 1352 aa11.27□□□□□ -0.61
GPC3-203ENST00000406757 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
GPC3-203ENST00000406757 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
GPC3-203ENST00000406757 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
GPC3-203ENST00000406757 MTHFSP49914 203 aa11.26□□□□□ -0.61
GPC3-203ENST00000406757 DDB1Q16531 1140 aa11.26□□□□□ -0.61
GPC3-203ENST00000406757 EMILIN1Q9Y6C2 1016 aa11.26□□□□□ -0.61
GPC3-203ENST00000406757 LRRC37A3O60309 1634 aa11.25□□□□□ -0.61
GPC3-203ENST00000406757 PTF1AQ7RTS3 328 aa11.25□□□□□ -0.61
GPC3-203ENST00000406757 POLKQ9UBT6 870 aa11.25□□□□□ -0.61
GPC3-203ENST00000406757 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
GPC3-203ENST00000406757 ANKRD26Q9UPS8 1709 aa11.25□□□□□ -0.61
GPC3-203ENST00000406757 KCNQ2O43526 872 aa11.24□□□□□ -0.61
GPC3-203ENST00000406757 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
GPC3-203ENST00000406757 SPON1Q9HCB6 807 aa11.24□□□□□ -0.61
GPC3-203ENST00000406757 MRS2Q9HD23 443 aa11.24□□□□□ -0.61
GPC3-203ENST00000406757 PPP1R1BQ9UD71 204 aaPredicted RBP11.24□□□□□ -0.61
GPC3-203ENST00000406757 WDR17Q8IZU2 1322 aa11.24□□□□□ -0.61
GPC3-203ENST00000406757 COL18A1P39060 1754 aa11.23□□□□□ -0.61
GPC3-203ENST00000406757 PLSCR1O15162 318 aa11.23□□□□□ -0.61
GPC3-203ENST00000406757 GABBR2O75899 941 aa11.23□□□□□ -0.61
GPC3-203ENST00000406757 ARHGEF25Q86VW2 580 aa11.23□□□□□ -0.61
GPC3-203ENST00000406757 MARCH10Q8NA82 808 aaPredicted RBP11.23□□□□□ -0.61
GPC3-203ENST00000406757 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
GPC3-203ENST00000406757 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
GPC3-203ENST00000406757 MAP2P11137 1827 aaKnown RBP11.22□□□□□ -0.61
GPC3-203ENST00000406757 AMPHP49418 695 aa11.22□□□□□ -0.61
GPC3-203ENST00000406757 MAP3K19Q56UN5 1328 aa11.22□□□□□ -0.61
GPC3-203ENST00000406757 KCNH5Q8NCM2 988 aa11.22□□□□□ -0.61
GPC3-203ENST00000406757 ANO8Q9HCE9 1232 aaPredicted RBP11.22□□□□□ -0.61
GPC3-203ENST00000406757 CCER2I3L3R5 266 aa11.21□□□□□ -0.61
GPC3-203ENST00000406757 PRR29P0C7W0 189 aa11.21□□□□□ -0.61
GPC3-203ENST00000406757 YY1P25490 414 aa11.21□□□□□ -0.61
GPC3-203ENST00000406757 LTV1Q96GA3 475 aaPredicted RBP11.21□□□□□ -0.61
GPC3-203ENST00000406757 PDGFDQ9GZP0 370 aaPredicted RBP11.21□□□□□ -0.61
GPC3-203ENST00000406757 SBF2Q86WG5 1849 aa11.21□□□□□ -0.62
GPC3-203ENST00000406757 SENP3-EIF4A1A0A087X0R7 540 aa11.2□□□□□ -0.62
GPC3-203ENST00000406757 HSP90AB2PQ58FF8 381 aa11.2□□□□□ -0.62
GPC3-203ENST00000406757 FAM9BQ8IZU0 186 aa11.2□□□□□ -0.62
GPC3-203ENST00000406757 PROM2Q8N271 834 aa11.2□□□□□ -0.62
GPC3-203ENST00000406757 CDCA7Q9BWT1 371 aaPredicted RBP11.2□□□□□ -0.62
GPC3-203ENST00000406757 CARD10Q9BWT7 1032 aa11.2□□□□□ -0.62
GPC3-203ENST00000406757 WNK3Q9BYP7 1800 aa11.2□□□□□ -0.62
GPC3-203ENST00000406757 UTRNP46939 3433 aa11.19□□□□□ -0.62
GPC3-203ENST00000406757 RGPD3A6NKT7 1758 aaPredicted RBP11.19□□□□□ -0.62
GPC3-203ENST00000406757 RGPD4Q7Z3J3 1758 aa11.19□□□□□ -0.62
GPC3-203ENST00000406757 HOXC9P31274 260 aa11.19□□□□□ -0.62
GPC3-203ENST00000406757 NFAT5O94916 1531 aa11.19□□□□□ -0.62
GPC3-203ENST00000406757 RGPD5Q99666 1765 aa11.18□□□□□ -0.62
GPC3-203ENST00000406757 USP54Q70EL1 1684 aa11.18□□□□□ -0.62
GPC3-203ENST00000406757 EXOC5O00471 708 aa11.18□□□□□ -0.62
GPC3-203ENST00000406757 ZBTB7AO95365 584 aa11.18□□□□□ -0.62
GPC3-203ENST00000406757 CFAP53Q96M91 514 aa11.18□□□□□ -0.62
GPC3-203ENST00000406757 BCL9O00512 1426 aa11.18□□□□□ -0.62
GPC3-203ENST00000406757 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
GPC3-203ENST00000406757 TXNRD1Q16881 649 aa11.17□□□□□ -0.62
GPC3-203ENST00000406757 PNISRQ8TF01 805 aaKnown RBP11.17□□□□□ -0.62
GPC3-203ENST00000406757 IP6K1Q92551 441 aa11.17□□□□□ -0.62
GPC3-203ENST00000406757 CASZ1Q86V15 1759 aa11.17□□□□□ -0.62
GPC3-203ENST00000406757 LTN1O94822 1766 aa11.16□□□□□ -0.62
GPC3-203ENST00000406757 DIAPH1O60610 1272 aaKnown RBP11.16□□□□□ -0.62
GPC3-203ENST00000406757 EIF4A2Q14240 407 aaKnown RBP11.16□□□□□ -0.62
GPC3-203ENST00000406757 ACSBG1Q96GR2 724 aa11.16□□□□□ -0.62
GPC3-203ENST00000406757 STK32BQ9NY57 414 aa11.16□□□□□ -0.62
GPC3-203ENST00000406757 TNS2Q63HR2 1409 aa11.16□□□□□ -0.62
GPC3-203ENST00000406757 IL13P35225 146 aa11.15□□□□□ -0.62
GPC3-203ENST00000406757 PTGER2P43116 358 aa11.15□□□□□ -0.62
GPC3-203ENST00000406757 SLC15A2Q16348 729 aa11.15□□□□□ -0.62
GPC3-203ENST00000406757 YTHDC1Q96MU7 727 aaKnown RBP11.15□□□□□ -0.62
GPC3-203ENST00000406757 ADAMTS8Q9UP79 889 aa11.15□□□□□ -0.62
GPC3-203ENST00000406757 FLT4P35916 1363 aa11.15□□□□□ -0.63
GPC3-203ENST00000406757 COL3A1P02461 1466 aaPredicted RBP11.14□□□□□ -0.63
GPC3-203ENST00000406757 HMOX1P09601 288 aa11.14□□□□□ -0.63
GPC3-203ENST00000406757 U2AF1L5P0DN76 240 aaPredicted RBP11.14□□□□□ -0.63
GPC3-203ENST00000406757 U2AF1Q01081 240 aaKnown RBP eCLIP11.14□□□□□ -0.63
GPC3-203ENST00000406757 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
GPC3-203ENST00000406757 CCDC146Q8IYE0 955 aa11.14□□□□□ -0.63
GPC3-203ENST00000406757 USHBP1Q8N6Y0 703 aa11.14□□□□□ -0.63
GPC3-203ENST00000406757 ANKRD24Q8TF21 1146 aa11.14□□□□□ -0.63
GPC3-203ENST00000406757 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
GPC3-203ENST00000406757 SMG6Q86US8 1419 aaKnown RBP11.14□□□□□ -0.63
GPC3-203ENST00000406757 ERBB3P21860 1342 aa11.13□□□□□ -0.63
GPC3-203ENST00000406757 ABCC6O95255 1503 aa11.13□□□□□ -0.63
GPC3-203ENST00000406757 IL2RBP14784 551 aa11.12□□□□□ -0.63
GPC3-203ENST00000406757 AEBP1Q8IUX7 1158 aa11.12□□□□□ -0.63
GPC3-203ENST00000406757 EYA1Q99502 592 aa11.12□□□□□ -0.63
GPC3-203ENST00000406757 NUDCQ9Y266 331 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms