RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 CAMK4Q16566 473 aa9.22□□□□□ -0.93
RBFOX2-205ENST00000405409 CCDC57Q2TAC2 916 aa9.22□□□□□ -0.93
RBFOX2-205ENST00000405409 SPECC1LQ69YQ0 1117 aa9.22□□□□□ -0.93
RBFOX2-205ENST00000405409 CYP46A1Q9Y6A2 500 aa9.22□□□□□ -0.93
RBFOX2-205ENST00000405409 DIAPH1O60610 1272 aaKnown RBP9.22□□□□□ -0.93
RBFOX2-205ENST00000405409 TRIM21P19474 475 aaKnown RBP9.22□□□□□ -0.93
RBFOX2-205ENST00000405409 HOOK3Q86VS8 718 aa9.22□□□□□ -0.93
RBFOX2-205ENST00000405409 WDR66Q8TBY9 1149 aa9.22□□□□□ -0.93
RBFOX2-205ENST00000405409 HOMER2Q9NSB8 354 aa9.21□□□□□ -0.93
RBFOX2-205ENST00000405409 KIF4BQ2VIQ3 1234 aa9.21□□□□□ -0.93
RBFOX2-205ENST00000405409 TRIM22Q8IYM9 498 aa9.21□□□□□ -0.93
RBFOX2-205ENST00000405409 TTC16Q8NEE8 873 aa9.21□□□□□ -0.93
RBFOX2-205ENST00000405409 ZSCAN12O43309 604 aa9.21□□□□□ -0.93
RBFOX2-205ENST00000405409 CCDC6Q16204 474 aa9.21□□□□□ -0.93
RBFOX2-205ENST00000405409 SMARCC1Q92922 1105 aaPredicted RBP9.21□□□□□ -0.93
RBFOX2-205ENST00000405409 MAATS1Q7Z4T9 603 aa9.21□□□□□ -0.94
RBFOX2-205ENST00000405409 K7ELQ4 463 aaPredicted RBP9.21□□□□□ -0.94
RBFOX2-205ENST00000405409 ANKRD1Q15327 319 aa9.21□□□□□ -0.94
RBFOX2-205ENST00000405409 UBAP1LF5GYI3 381 aa9.21□□□□□ -0.94
RBFOX2-205ENST00000405409 SPECC1Q5M775 1068 aa9.21□□□□□ -0.94
RBFOX2-205ENST00000405409 LARP1BQ659C4 914 aaKnown RBP9.21□□□□□ -0.94
RBFOX2-205ENST00000405409 GAPVD1Q14C86 1478 aa9.21□□□□□ -0.94
RBFOX2-205ENST00000405409 KIF18AQ8NI77 898 aa9.2□□□□□ -0.94
RBFOX2-205ENST00000405409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.2□□□□□ -0.94
RBFOX2-205ENST00000405409 BMP2KQ9NSY1 1161 aaPredicted RBP9.2□□□□□ -0.94
RBFOX2-205ENST00000405409 FAM177BA6PVY3 158 aa9.2□□□□□ -0.94
RBFOX2-205ENST00000405409 MXRA7P84157 204 aa9.2□□□□□ -0.94
RBFOX2-205ENST00000405409 FBF1Q8TES7 1133 aa9.2□□□□□ -0.94
RBFOX2-205ENST00000405409 NOL3O60936 208 aaKnown RBP9.2□□□□□ -0.94
RBFOX2-205ENST00000405409 ZNF76P36508 570 aa9.2□□□□□ -0.94
RBFOX2-205ENST00000405409 PIBF1Q8WXW3 757 aa9.2□□□□□ -0.94
RBFOX2-205ENST00000405409 HLTFQ14527 1009 aaKnown RBP eCLIP9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 L3MBTL2Q969R5 705 aa9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 RUNDC1Q96C34 613 aa9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 SYCE3A1L190 88 aa9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 C1orf115Q9H7X2 142 aa9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 HSPA4P34932 840 aa9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 MSL1Q68DK7 614 aa9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 BBXQ8WY36 941 aaPredicted RBP9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 MACROD2A1Z1Q3 448 aa9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 KIF2AO00139 706 aaPredicted RBP9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 CACNA2D4Q7Z3S7 1137 aa9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 TSNARE1Q96NA8 513 aa9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 TRMT1Q9NXH9 659 aaKnown RBP9.19□□□□□ -0.94
RBFOX2-205ENST00000405409 HMOX1P09601 288 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 CTNNA2P26232 953 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 PAIP2Q9BPZ3 127 aaKnown RBP9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 TAOK3Q9H2K8 898 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 EVC2Q86UK5 1308 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 SURF6O75683 361 aaKnown RBP9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 PPP1R14CQ8TAE6 165 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 ANKRD30AQ9BXX3 1397 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 HSF2BPO75031 334 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 MAP3K11Q16584 847 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 ZSCAN30Q86W11 494 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 FAM184BQ9ULE4 1060 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 CCDC158Q5M9N0 1113 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 FKBP15Q5T1M5 1219 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 V9GYY5 206 aaPredicted RBP9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 TSG101Q99816 390 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 DNAI2Q9GZS0 605 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 PDZRN3Q9UPQ7 1066 aa9.18□□□□□ -0.94
RBFOX2-205ENST00000405409 A0A1W2PRG0 241 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 FSD2A1L4K1 749 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 PAFAH1B1P43034 410 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 XPCQ01831 940 aaPredicted RBP9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 KIF6Q6ZMV9 814 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 DDX46Q7L014 1031 aaKnown RBP9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 ST20-MTHFSA0A0A6YYL1 179 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 GNAI1P63096 354 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 POTEB2H3BUK9 544 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 VGFO15240 615 aaPredicted RBP9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 PPP1R12BO60237 982 aaPredicted RBP9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 NUP88Q99567 741 aaPredicted RBP9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 CNNM1Q9NRU3 951 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 TPD52P55327 224 aaPredicted RBP9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 CEP112Q8N8E3 955 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 CLIP2Q9UDT6 1046 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 SFPQP23246 707 aaKnown RBP eCLIP9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 PDRG1Q9NUG6 133 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 SOGA1O94964 1423 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 WRNQ14191 1432 aaPredicted RBP eCLIP9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 TOP1P11387 765 aaKnown RBP9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 FERMT2Q96AC1 680 aa9.17□□□□□ -0.94
RBFOX2-205ENST00000405409 PABPN1LA6NDY0 278 aaKnown RBP9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 KIF3CO14782 793 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 CCDC96Q2M329 555 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 HYPKQ9NX55 129 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 CEP131Q9UPN4 1083 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 WDR62O43379 1518 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 KLHL10Q6JEL2 608 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 RAB3IL1Q8TBN0 382 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 CEP83Q9Y592 693 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 GRIN2BQ13224 1484 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 PSMC4P43686 418 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 TMCO4Q5TGY1 634 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 FAM114A1Q8IWE2 563 aa9.16□□□□□ -0.94
RBFOX2-205ENST00000405409 USO1O60763 962 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms