RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 IGSF1Q8N6C5 1336 aa20.4■□□□□ 0.86
CDKN1A-203ENST00000405375 MFAP1P55081 439 aaKnown RBP20.39■□□□□ 0.86
CDKN1A-203ENST00000405375 MTHFSDQ2M296 383 aaKnown RBP20.39■□□□□ 0.86
CDKN1A-203ENST00000405375 BMP2KLQ5H9B9 411 aa20.39■□□□□ 0.85
CDKN1A-203ENST00000405375 ANKRD45Q5TZF3 282 aa20.39■□□□□ 0.85
CDKN1A-203ENST00000405375 CEP170BQ9Y4F5 1589 aaPredicted RBP20.39■□□□□ 0.85
CDKN1A-203ENST00000405375 MARF1Q9Y4F3 1742 aaKnown RBP20.38■□□□□ 0.85
CDKN1A-203ENST00000405375 FRAT2O75474 233 aaPredicted RBP20.38■□□□□ 0.85
CDKN1A-203ENST00000405375 EYA1Q99502 592 aa20.38■□□□□ 0.85
CDKN1A-203ENST00000405375 ANTXR1Q9H6X2 564 aa20.38■□□□□ 0.85
CDKN1A-203ENST00000405375 FOXO3O43524 673 aa20.38■□□□□ 0.85
CDKN1A-203ENST00000405375 USP54Q70EL1 1684 aa20.37■□□□□ 0.85
CDKN1A-203ENST00000405375 AMPHP49418 695 aa20.37■□□□□ 0.85
CDKN1A-203ENST00000405375 NLRP6P59044 892 aa20.36■□□□□ 0.85
CDKN1A-203ENST00000405375 PTPRCP08575 1304 aa20.35■□□□□ 0.85
CDKN1A-203ENST00000405375 ATP10DQ9P241 1426 aa20.34■□□□□ 0.85
CDKN1A-203ENST00000405375 SLKQ9H2G2 1235 aaPredicted RBP20.34■□□□□ 0.85
CDKN1A-203ENST00000405375 GAS2L2Q8NHY3 880 aa20.33■□□□□ 0.85
CDKN1A-203ENST00000405375 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
CDKN1A-203ENST00000405375 NWD1Q149M9 1564 aa20.33■□□□□ 0.85
CDKN1A-203ENST00000405375 MIS18AQ9NYP9 233 aa20.33■□□□□ 0.84
CDKN1A-203ENST00000405375 HOXC9P31274 260 aa20.32■□□□□ 0.84
CDKN1A-203ENST00000405375 RBM25P49756 843 aaKnown RBP20.32■□□□□ 0.84
CDKN1A-203ENST00000405375 GSE1Q14687 1217 aa20.32■□□□□ 0.84
CDKN1A-203ENST00000405375 DCTPP1Q9H773 170 aa20.32■□□□□ 0.84
CDKN1A-203ENST00000405375 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
CDKN1A-203ENST00000405375 TSPYL4Q9UJ04 414 aa20.31■□□□□ 0.84
CDKN1A-203ENST00000405375 HTATSF1O43719 755 aaKnown RBP20.3■□□□□ 0.84
CDKN1A-203ENST00000405375 ANKRD44Q8N8A2 993 aa20.3■□□□□ 0.84
CDKN1A-203ENST00000405375 MSH6P52701 1360 aa20.3■□□□□ 0.84
CDKN1A-203ENST00000405375 SLC4A2P04920 1241 aa20.3■□□□□ 0.84
CDKN1A-203ENST00000405375 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
CDKN1A-203ENST00000405375 NUTM2GQ5VZR2 741 aa20.29■□□□□ 0.84
CDKN1A-203ENST00000405375 RTL1A6NKG5 1358 aa20.29■□□□□ 0.84
CDKN1A-203ENST00000405375 RPAP2Q8IXW5 612 aaPredicted RBP20.29■□□□□ 0.84
CDKN1A-203ENST00000405375 ABTB2Q8N961 1025 aa20.29■□□□□ 0.84
CDKN1A-203ENST00000405375 CEP85Q6P2H3 762 aa20.28■□□□□ 0.84
CDKN1A-203ENST00000405375 MEIS3Q99687 375 aa20.27■□□□□ 0.83
CDKN1A-203ENST00000405375 TBC1D9Q6ZT07 1266 aa20.26■□□□□ 0.83
CDKN1A-203ENST00000405375 PLEKHM2Q8IWE5 1019 aa20.26■□□□□ 0.83
CDKN1A-203ENST00000405375 ANKLE2Q86XL3 938 aa20.25■□□□□ 0.83
CDKN1A-203ENST00000405375 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
CDKN1A-203ENST00000405375 ZNF142P52746 1687 aaPredicted RBP20.25■□□□□ 0.83
CDKN1A-203ENST00000405375 GNAT3A8MTJ3 354 aa20.25■□□□□ 0.83
CDKN1A-203ENST00000405375 G2E3Q7L622 706 aa20.25■□□□□ 0.83
CDKN1A-203ENST00000405375 GSPT1P15170 499 aaKnown RBP20.24■□□□□ 0.83
CDKN1A-203ENST00000405375 SNX21Q969T3 373 aa20.23■□□□□ 0.83
CDKN1A-203ENST00000405375 MAP3K5Q99683 1374 aa20.23■□□□□ 0.83
CDKN1A-203ENST00000405375 IL17REQ8NFR9 667 aa20.22■□□□□ 0.83
CDKN1A-203ENST00000405375 KIF2CQ99661 725 aa20.22■□□□□ 0.83
CDKN1A-203ENST00000405375 NCOA3Q9Y6Q9 1424 aa20.21■□□□□ 0.83
CDKN1A-203ENST00000405375 CDC45O75419 566 aa20.21■□□□□ 0.83
CDKN1A-203ENST00000405375 CCT4P50991 539 aaKnown RBP20.21■□□□□ 0.83
CDKN1A-203ENST00000405375 HSCBQ8IWL3 235 aa20.21■□□□□ 0.83
CDKN1A-203ENST00000405375 NFAT5O94916 1531 aa20.21■□□□□ 0.83
CDKN1A-203ENST00000405375 LTN1O94822 1766 aa20.21■□□□□ 0.83
CDKN1A-203ENST00000405375 FAM208AQ9UK61 1670 aaKnown RBP20.2■□□□□ 0.82
CDKN1A-203ENST00000405375 F6X3S4 739 aa20.2■□□□□ 0.82
CDKN1A-203ENST00000405375 ADGRL3Q9HAR2 1447 aa20.2■□□□□ 0.82
CDKN1A-203ENST00000405375 TTC22Q5TAA0 569 aa20.2■□□□□ 0.82
CDKN1A-203ENST00000405375 SPRYD3Q8NCJ5 442 aa20.2■□□□□ 0.82
CDKN1A-203ENST00000405375 BABAM1Q9NWV8 329 aa20.2■□□□□ 0.82
CDKN1A-203ENST00000405375 C16orf71Q8IYS4 520 aaPredicted RBP20.19■□□□□ 0.82
CDKN1A-203ENST00000405375 LTV1Q96GA3 475 aaPredicted RBP20.19■□□□□ 0.82
CDKN1A-203ENST00000405375 STK31Q9BXU1 1019 aa20.19■□□□□ 0.82
CDKN1A-203ENST00000405375 SOS1Q07889 1333 aaPredicted RBP20.19■□□□□ 0.82
CDKN1A-203ENST00000405375 IP6K1Q92551 441 aa20.19■□□□□ 0.82
CDKN1A-203ENST00000405375 CCDC30Q5VVM6 783 aa20.18■□□□□ 0.82
CDKN1A-203ENST00000405375 SLC4A10Q6U841 1118 aa20.18■□□□□ 0.82
CDKN1A-203ENST00000405375 RBM33Q96EV2 1170 aaKnown RBP20.18■□□□□ 0.82
CDKN1A-203ENST00000405375 C14orf37Q86TY3 774 aa20.18■□□□□ 0.82
CDKN1A-203ENST00000405375 OTUD7AQ8TE49 926 aaPredicted RBP20.18■□□□□ 0.82
CDKN1A-203ENST00000405375 CHMP5Q9NZZ3 219 aa20.18■□□□□ 0.82
CDKN1A-203ENST00000405375 CACNA1FO60840 1977 aa20.17■□□□□ 0.82
CDKN1A-203ENST00000405375 FLIIQ13045 1269 aa20.17■□□□□ 0.82
CDKN1A-203ENST00000405375 TAF7Q15545 349 aaPredicted RBP20.17■□□□□ 0.82
CDKN1A-203ENST00000405375 DDIT3P35638 169 aa20.16■□□□□ 0.82
CDKN1A-203ENST00000405375 HMMRO75330 724 aa20.15■□□□□ 0.82
CDKN1A-203ENST00000405375 USHBP1Q8N6Y0 703 aa20.15■□□□□ 0.82
CDKN1A-203ENST00000405375 CEMIPQ8WUJ3 1361 aa20.15■□□□□ 0.82
CDKN1A-203ENST00000405375 SETD1BQ9UPS6 1966 aaKnown RBP20.15■□□□□ 0.82
CDKN1A-203ENST00000405375 ADAMTSL3P82987 1691 aa20.15■□□□□ 0.82
CDKN1A-203ENST00000405375 PHRF1Q9P1Y6 1649 aaKnown RBP20.14■□□□□ 0.82
CDKN1A-203ENST00000405375 SMARCA5O60264 1052 aaPredicted RBP20.14■□□□□ 0.81
CDKN1A-203ENST00000405375 ESCO1Q5FWF5 840 aa20.14■□□□□ 0.81
CDKN1A-203ENST00000405375 EIF5BO60841 1220 aaKnown RBP20.13■□□□□ 0.81
CDKN1A-203ENST00000405375 NBPF6Q5VWK0 638 aa20.13■□□□□ 0.81
CDKN1A-203ENST00000405375 NBPF4Q96M43 638 aa20.13■□□□□ 0.81
CDKN1A-203ENST00000405375 MED1Q15648 1581 aaPredicted RBP20.13■□□□□ 0.81
CDKN1A-203ENST00000405375 GNAI2P04899 355 aa20.13■□□□□ 0.81
CDKN1A-203ENST00000405375 PSME1Q06323 249 aa20.13■□□□□ 0.81
CDKN1A-203ENST00000405375 FKBP5Q13451 457 aaPredicted RBP20.13■□□□□ 0.81
CDKN1A-203ENST00000405375 N4BP2Q86UW6 1770 aaPredicted RBP20.12■□□□□ 0.81
CDKN1A-203ENST00000405375 KCNH5Q8NCM2 988 aa20.12■□□□□ 0.81
CDKN1A-203ENST00000405375 APBB1O00213 710 aa20.11■□□□□ 0.81
CDKN1A-203ENST00000405375 CD2BP2O95400 341 aaKnown RBP20.11■□□□□ 0.81
CDKN1A-203ENST00000405375 SDSP20132 328 aa20.11■□□□□ 0.81
CDKN1A-203ENST00000405375 MCM4P33991 863 aa20.11■□□□□ 0.81
CDKN1A-203ENST00000405375 PXDNLA1KZ92 1463 aa20.1■□□□□ 0.81
CDKN1A-203ENST00000405375 NPHP4O75161 1426 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms