RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 CCDC146Q8IYE0 955 aa14.32□□□□□ -0.12
PDE4D-206ENST00000405053 USP35Q9P2H5 1018 aa14.32□□□□□ -0.12
PDE4D-206ENST00000405053 RGS17Q9UGC6 210 aaPredicted RBP14.32□□□□□ -0.12
PDE4D-206ENST00000405053 PARP4Q9UKK3 1724 aaKnown RBP14.32□□□□□ -0.12
PDE4D-206ENST00000405053 AMOTQ4VCS5 1084 aa14.31□□□□□ -0.12
PDE4D-206ENST00000405053 CCDC9Q9Y3X0 531 aaKnown RBP14.31□□□□□ -0.12
PDE4D-206ENST00000405053 PKD1L3Q7Z443 1732 aa14.31□□□□□ -0.12
PDE4D-206ENST00000405053 MAPK8IP3Q9UPT6 1336 aa14.31□□□□□ -0.12
PDE4D-206ENST00000405053 NEFMP07197 916 aa14.3□□□□□ -0.12
PDE4D-206ENST00000405053 PLEKHO1Q53GL0 409 aaPredicted RBP14.3□□□□□ -0.12
PDE4D-206ENST00000405053 THSD7AQ9UPZ6 1657 aa14.3□□□□□ -0.12
PDE4D-206ENST00000405053 APAF1O14727 1248 aa14.29□□□□□ -0.12
PDE4D-206ENST00000405053 MTHFSDQ2M296 383 aaKnown RBP14.29□□□□□ -0.12
PDE4D-206ENST00000405053 NGEFQ8N5V2 710 aa14.29□□□□□ -0.12
PDE4D-206ENST00000405053 GAS2L2Q8NHY3 880 aa14.29□□□□□ -0.12
PDE4D-206ENST00000405053 TMPOP42166 694 aaKnown RBP14.28□□□□□ -0.12
PDE4D-206ENST00000405053 RBM6P78332 1123 aaKnown RBP14.28□□□□□ -0.12
PDE4D-206ENST00000405053 NFE2L2Q16236 605 aa14.28□□□□□ -0.12
PDE4D-206ENST00000405053 FAM98CQ17RN3 349 aaKnown RBP14.28□□□□□ -0.12
PDE4D-206ENST00000405053 ZCRB1Q8TBF4 217 aaKnown RBP14.28□□□□□ -0.12
PDE4D-206ENST00000405053 SPG7Q9UQ90 795 aa14.28□□□□□ -0.12
PDE4D-206ENST00000405053 TNS2Q63HR2 1409 aa14.27□□□□□ -0.12
PDE4D-206ENST00000405053 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.13
PDE4D-206ENST00000405053 PCDH11XQ9BZA7 1347 aa14.26□□□□□ -0.13
PDE4D-206ENST00000405053 PCDH11YQ9BZA8 1340 aa14.26□□□□□ -0.13
PDE4D-206ENST00000405053 SHANK3Q9BYB0 1731 aa14.26□□□□□ -0.13
PDE4D-206ENST00000405053 LRRC37A3O60309 1634 aa14.26□□□□□ -0.13
PDE4D-206ENST00000405053 EXOC5O00471 708 aa14.25□□□□□ -0.13
PDE4D-206ENST00000405053 CYP27B1O15528 508 aa14.25□□□□□ -0.13
PDE4D-206ENST00000405053 HTATSF1O43719 755 aaKnown RBP14.25□□□□□ -0.13
PDE4D-206ENST00000405053 CCDC27Q2M243 656 aa14.25□□□□□ -0.13
PDE4D-206ENST00000405053 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
PDE4D-206ENST00000405053 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
PDE4D-206ENST00000405053 POTEAQ6S8J7 498 aa14.25□□□□□ -0.13
PDE4D-206ENST00000405053 PHKG2P15735 406 aa14.24□□□□□ -0.13
PDE4D-206ENST00000405053 RXRBP28702 533 aa14.24□□□□□ -0.13
PDE4D-206ENST00000405053 RIPK4P57078 832 aa14.24□□□□□ -0.13
PDE4D-206ENST00000405053 NKX1-1Q15270 411 aaPredicted RBP14.24□□□□□ -0.13
PDE4D-206ENST00000405053 DDB1Q16531 1140 aa14.24□□□□□ -0.13
PDE4D-206ENST00000405053 IFNL2Q8IZJ0 200 aa14.24□□□□□ -0.13
PDE4D-206ENST00000405053 MAP3K5Q99683 1374 aa14.23□□□□□ -0.13
PDE4D-206ENST00000405053 GNAT3A8MTJ3 354 aa14.23□□□□□ -0.13
PDE4D-206ENST00000405053 LMOD3Q0VAK6 560 aa14.23□□□□□ -0.13
PDE4D-206ENST00000405053 TRIM35Q9UPQ4 493 aa14.23□□□□□ -0.13
PDE4D-206ENST00000405053 RRP7AQ9Y3A4 280 aaKnown RBP14.23□□□□□ -0.13
PDE4D-206ENST00000405053 ZNF521Q96K83 1311 aa14.22□□□□□ -0.13
PDE4D-206ENST00000405053 DLG5Q8TDM6 1919 aa14.22□□□□□ -0.13
PDE4D-206ENST00000405053 HSP90AB1P08238 724 aaKnown RBP14.22□□□□□ -0.13
PDE4D-206ENST00000405053 HNRNPUQ00839 825 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDE4D-206ENST00000405053 C1orf141Q5JVX7 400 aa14.22□□□□□ -0.13
PDE4D-206ENST00000405053 SEPT12Q8IYM1 358 aa14.22□□□□□ -0.13
PDE4D-206ENST00000405053 ADAMTS7Q9UKP4 1686 aa14.22□□□□□ -0.13
PDE4D-206ENST00000405053 NEUROD2Q15784 382 aa14.21□□□□□ -0.13
PDE4D-206ENST00000405053 CEMIPQ8WUJ3 1361 aa14.21□□□□□ -0.14
PDE4D-206ENST00000405053 ZBED9Q6R2W3 1325 aa14.2□□□□□ -0.14
PDE4D-206ENST00000405053 WWC1Q8IX03 1113 aa14.2□□□□□ -0.14
PDE4D-206ENST00000405053 MARCH10Q8NA82 808 aaPredicted RBP14.2□□□□□ -0.14
PDE4D-206ENST00000405053 DDX54Q8TDD1 881 aaKnown RBP14.2□□□□□ -0.14
PDE4D-206ENST00000405053 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
PDE4D-206ENST00000405053 BCL9O00512 1426 aa14.2□□□□□ -0.14
PDE4D-206ENST00000405053 KDM6AO15550 1401 aaPredicted RBP14.2□□□□□ -0.14
PDE4D-206ENST00000405053 IL17REQ8NFR9 667 aa14.19□□□□□ -0.14
PDE4D-206ENST00000405053 RTF1Q92541 710 aaKnown RBP14.19□□□□□ -0.14
PDE4D-206ENST00000405053 RGS12O14924 1447 aa14.18□□□□□ -0.14
PDE4D-206ENST00000405053 SENP3-EIF4A1A0A087X0R7 540 aa14.18□□□□□ -0.14
PDE4D-206ENST00000405053 A0A0G2JS52 829 aa14.18□□□□□ -0.14
PDE4D-206ENST00000405053 RNMTO43148 476 aaKnown RBP14.18□□□□□ -0.14
PDE4D-206ENST00000405053 MYT1Q01538 1121 aa14.18□□□□□ -0.14
PDE4D-206ENST00000405053 PDE3BQ13370 1112 aa14.18□□□□□ -0.14
PDE4D-206ENST00000405053 MPRIPQ6WCQ1 1025 aa14.18□□□□□ -0.14
PDE4D-206ENST00000405053 WDR63Q8IWG1 891 aa14.18□□□□□ -0.14
PDE4D-206ENST00000405053 MCM10Q7L590 875 aa14.17□□□□□ -0.14
PDE4D-206ENST00000405053 LGR6Q9HBX8 967 aa14.17□□□□□ -0.14
PDE4D-206ENST00000405053 SALL2Q9Y467 1007 aaPredicted RBP14.17□□□□□ -0.14
PDE4D-206ENST00000405053 MRC1P22897 1456 aa14.17□□□□□ -0.14
PDE4D-206ENST00000405053 SCN11AQ9UI33 1791 aa14.17□□□□□ -0.14
PDE4D-206ENST00000405053 IL16Q14005 1332 aa14.16□□□□□ -0.14
PDE4D-206ENST00000405053 ERVV-2B6SEH9 535 aa14.16□□□□□ -0.14
PDE4D-206ENST00000405053 CALD1Q05682 793 aaKnown RBP14.16□□□□□ -0.14
PDE4D-206ENST00000405053 DCTN1Q14203 1278 aa14.16□□□□□ -0.14
PDE4D-206ENST00000405053 BRWD3Q6RI45 1802 aa14.15□□□□□ -0.14
PDE4D-206ENST00000405053 KRT27Q7Z3Y8 459 aa14.15□□□□□ -0.14
PDE4D-206ENST00000405053 VIRMAQ69YN4 1812 aaKnown RBP14.14□□□□□ -0.15
PDE4D-206ENST00000405053 YTHDC1Q96MU7 727 aaKnown RBP14.14□□□□□ -0.15
PDE4D-206ENST00000405053 THUMPD2Q9BTF0 503 aaKnown RBP14.14□□□□□ -0.15
PDE4D-206ENST00000405053 SLC52A2Q9HAB3 445 aa14.14□□□□□ -0.15
PDE4D-206ENST00000405053 TOGARAM1Q9Y4F4 1720 aa14.14□□□□□ -0.15
PDE4D-206ENST00000405053 ZNF853P0CG23 659 aa14.13□□□□□ -0.15
PDE4D-206ENST00000405053 GOLGA2Q08379 1002 aa14.13□□□□□ -0.15
PDE4D-206ENST00000405053 IFT57Q9NWB7 429 aa14.13□□□□□ -0.15
PDE4D-206ENST00000405053 BABAM1Q9NWV8 329 aa14.13□□□□□ -0.15
PDE4D-206ENST00000405053 EP400Q96L91 3159 aa14.12□□□□□ -0.15
PDE4D-206ENST00000405053 SIPA1L3O60292 1781 aaPredicted RBP14.12□□□□□ -0.15
PDE4D-206ENST00000405053 TEFQ10587 303 aa14.12□□□□□ -0.15
PDE4D-206ENST00000405053 TAF7Q15545 349 aaPredicted RBP14.12□□□□□ -0.15
PDE4D-206ENST00000405053 CFAP44Q96MT7 982 aa14.12□□□□□ -0.15
PDE4D-206ENST00000405053 CHL1O00533 1208 aa14.11□□□□□ -0.15
PDE4D-206ENST00000405053 CABP4P57796 275 aa14.11□□□□□ -0.15
PDE4D-206ENST00000405053 GNAI1P63096 354 aa14.11□□□□□ -0.15
PDE4D-206ENST00000405053 FAM196AQ6ZSG2 479 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms