RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 DYDC1Q8WWB3 177 aa16.9■□□□□ 0.3
TNRC18-203ENST00000399537 CCDC148Q8NFR7 591 aa16.9■□□□□ 0.3
TNRC18-203ENST00000399537 SYCE3A1L190 88 aa16.9■□□□□ 0.3
TNRC18-203ENST00000399537 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
TNRC18-203ENST00000399537 PLEKHH2Q8IVE3 1493 aa16.9■□□□□ 0.3
TNRC18-203ENST00000399537 PTPN23Q9H3S7 1636 aa16.89■□□□□ 0.3
TNRC18-203ENST00000399537 EIF5P55010 431 aaKnown RBP16.89■□□□□ 0.29
TNRC18-203ENST00000399537 HDGFL1Q5TGJ6 251 aa16.89■□□□□ 0.29
TNRC18-203ENST00000399537 ZSCAN25Q6NSZ9 544 aa16.89■□□□□ 0.29
TNRC18-203ENST00000399537 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
TNRC18-203ENST00000399537 PDRG1Q9NUG6 133 aa16.89■□□□□ 0.29
TNRC18-203ENST00000399537 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
TNRC18-203ENST00000399537 FKBP4Q02790 459 aaKnown RBP eCLIP16.89■□□□□ 0.296e-7■■■□□ 15.7
TNRC18-203ENST00000399537 CABP4P57796 275 aa16.88■□□□□ 0.29
TNRC18-203ENST00000399537 MVPQ14764 893 aaKnown RBP16.88■□□□□ 0.29
TNRC18-203ENST00000399537 ZNF397Q8NF99 534 aaPredicted RBP16.88■□□□□ 0.29
TNRC18-203ENST00000399537 UPF3BQ9BZI7 483 aaKnown RBP16.88■□□□□ 0.29
TNRC18-203ENST00000399537 CFAP45Q9UL16 551 aa16.88■□□□□ 0.29
TNRC18-203ENST00000399537 PIBF1Q8WXW3 757 aa16.88■□□□□ 0.29
TNRC18-203ENST00000399537 NUP62CLQ9H1M0 184 aa16.88■□□□□ 0.29
TNRC18-203ENST00000399537 TMEM132EQ6IEE7 984 aa16.88■□□□□ 0.29
TNRC18-203ENST00000399537 STAC3Q96MF2 364 aa16.88■□□□□ 0.29
TNRC18-203ENST00000399537 ESCO1Q5FWF5 840 aa16.87■□□□□ 0.29
TNRC18-203ENST00000399537 SLC4A2P04920 1241 aa16.87■□□□□ 0.29
TNRC18-203ENST00000399537 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
TNRC18-203ENST00000399537 ARHGAP29Q52LW3 1261 aa16.87■□□□□ 0.29
TNRC18-203ENST00000399537 SRCIN1Q9C0H9 1055 aa16.87■□□□□ 0.29
TNRC18-203ENST00000399537 WASF1Q92558 559 aa16.87■□□□□ 0.29
TNRC18-203ENST00000399537 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
TNRC18-203ENST00000399537 ANAPC15P60006 121 aa16.87■□□□□ 0.29
TNRC18-203ENST00000399537 PODXL2Q9NZ53 605 aa16.87■□□□□ 0.29
TNRC18-203ENST00000399537 PPP1R12BO60237 982 aaPredicted RBP16.86■□□□□ 0.29
TNRC18-203ENST00000399537 TATP17735 454 aaPredicted RBP16.86■□□□□ 0.29
TNRC18-203ENST00000399537 MYL6BP14649 208 aa16.86■□□□□ 0.29
TNRC18-203ENST00000399537 JAKMIP1Q96N16 626 aaKnown RBP16.86■□□□□ 0.29
TNRC18-203ENST00000399537 KIAA1107Q9UPP5 1409 aa16.86■□□□□ 0.29
TNRC18-203ENST00000399537 ZSCAN30Q86W11 494 aa16.86■□□□□ 0.29
TNRC18-203ENST00000399537 SMTNL1A8MU46 457 aa16.85■□□□□ 0.29
TNRC18-203ENST00000399537 PDCL2Q8N4E4 241 aa16.85■□□□□ 0.29
TNRC18-203ENST00000399537 SEC63Q9UGP8 760 aaKnown RBP16.85■□□□□ 0.29
TNRC18-203ENST00000399537 CASTP20810 708 aaKnown RBP16.85■□□□□ 0.29
TNRC18-203ENST00000399537 BLOC1S2Q6QNY1 142 aa16.85■□□□□ 0.29
TNRC18-203ENST00000399537 CEP131Q9UPN4 1083 aa16.85■□□□□ 0.29
TNRC18-203ENST00000399537 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
TNRC18-203ENST00000399537 GIMAP7Q8NHV1 300 aa16.84■□□□□ 0.29
TNRC18-203ENST00000399537 HFM1A2PYH4 1435 aa16.84■□□□□ 0.29
TNRC18-203ENST00000399537 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
TNRC18-203ENST00000399537 DNAI2Q9GZS0 605 aa16.84■□□□□ 0.29
TNRC18-203ENST00000399537 CTNNA3Q9UI47 895 aa16.84■□□□□ 0.29
TNRC18-203ENST00000399537 ZNF530Q6P9A1 599 aaPredicted RBP16.84■□□□□ 0.29
TNRC18-203ENST00000399537 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
TNRC18-203ENST00000399537 GOLGA6L10A0A0M3HER8 536 aa16.84■□□□□ 0.29
TNRC18-203ENST00000399537 IBSPP21815 317 aaPredicted RBP16.84■□□□□ 0.29
TNRC18-203ENST00000399537 CWC27Q6UX04 472 aaKnown RBP16.83■□□□□ 0.29
TNRC18-203ENST00000399537 SPA17Q15506 151 aa16.83■□□□□ 0.29
TNRC18-203ENST00000399537 MAP9Q49MG5 647 aa16.83■□□□□ 0.29
TNRC18-203ENST00000399537 PRDM10Q9NQV6 1147 aa16.83■□□□□ 0.29
TNRC18-203ENST00000399537 PCF11O94913 1555 aaKnown RBP16.83■□□□□ 0.28
TNRC18-203ENST00000399537 ZSCAN31Q96LW9 406 aaPredicted RBP16.83■□□□□ 0.28
TNRC18-203ENST00000399537 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
TNRC18-203ENST00000399537 PRKCSHP14314 528 aaPredicted RBP16.82■□□□□ 0.28
TNRC18-203ENST00000399537 RAI14Q9P0K7 980 aa16.82■□□□□ 0.28
TNRC18-203ENST00000399537 MAP3K11Q16584 847 aa16.82■□□□□ 0.28
TNRC18-203ENST00000399537 CRACR2AQ9BSW2 395 aa16.82■□□□□ 0.28
TNRC18-203ENST00000399537 CCDC113Q9H0I3 377 aa16.82■□□□□ 0.28
TNRC18-203ENST00000399537 ATF7IPQ6VMQ6 1270 aa16.82■□□□□ 0.28
TNRC18-203ENST00000399537 IGF1RP08069 1367 aa16.82■□□□□ 0.28
TNRC18-203ENST00000399537 CETN2P41208 172 aa16.82■□□□□ 0.28
TNRC18-203ENST00000399537 CFAP100Q494V2 611 aa16.82■□□□□ 0.28
TNRC18-203ENST00000399537 USP5P45974 858 aa16.82■□□□□ 0.28
TNRC18-203ENST00000399537 KRT32Q14532 448 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 TMCO3Q6UWJ1 677 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 MAP2K1Q02750 393 aaPredicted RBP16.81■□□□□ 0.28
TNRC18-203ENST00000399537 CASQ1P31415 396 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 SHTN1A0MZ66 631 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 NF2P35240 595 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 TNIP1Q15025 636 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 CAMK4Q16566 473 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 FAM135AQ9P2D6 1515 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 WDR63Q8IWG1 891 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 GOPCQ9HD26 462 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 SPG7Q9UQ90 795 aa16.81■□□□□ 0.28
TNRC18-203ENST00000399537 IMMTQ16891 758 aaKnown RBP16.8■□□□□ 0.28
TNRC18-203ENST00000399537 CEP63Q96MT8 703 aa16.8■□□□□ 0.28
TNRC18-203ENST00000399537 STAMBPO95630 424 aa16.8■□□□□ 0.28
TNRC18-203ENST00000399537 LRP2BPQ9P2M1 347 aa16.8■□□□□ 0.28
TNRC18-203ENST00000399537 LUZP1Q86V48 1076 aa16.8■□□□□ 0.28
TNRC18-203ENST00000399537 ZSCAN29Q8IWY8 852 aaPredicted RBP16.8■□□□□ 0.28
TNRC18-203ENST00000399537 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
TNRC18-203ENST00000399537 FILIP1Q7Z7B0 1213 aa16.8■□□□□ 0.28
TNRC18-203ENST00000399537 KIF2AO00139 706 aaPredicted RBP16.79■□□□□ 0.28
TNRC18-203ENST00000399537 TSG101Q99816 390 aa16.79■□□□□ 0.28
TNRC18-203ENST00000399537 TOM1L2Q6ZVM7 507 aa16.79■□□□□ 0.28
TNRC18-203ENST00000399537 VPS36Q86VN1 386 aa16.79■□□□□ 0.28
TNRC18-203ENST00000399537 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.79■□□□□ 0.282e-8■■■□□ 15.1
TNRC18-203ENST00000399537 CCDC178Q5BJE1 867 aa16.79■□□□□ 0.28
TNRC18-203ENST00000399537 DDX11Q96FC9 970 aa16.79■□□□□ 0.28
TNRC18-203ENST00000399537 PRAM1Q96QH2 718 aa16.79■□□□□ 0.28
TNRC18-203ENST00000399537 IFFO1Q0D2I5 559 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms